RNA–Protein interactions for RNA: ENST00000477324.6

XPC-206, Transcript of XPC complex subunit, DNA damage recognition and repair factor, humanhuman

TSL 2

Gene XPC, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XPC-206ENST00000477324 TTC37Q6PGP7 1564 aa11.88□□□□□ -0.51
XPC-206ENST00000477324 PTPRKQ15262 1439 aa11.87□□□□□ -0.51
XPC-206ENST00000477324 GPATCH8Q9UKJ3 1502 aaKnown RBP11.87□□□□□ -0.51
XPC-206ENST00000477324 OSCARQ8IYS5 282 aa11.87□□□□□ -0.51
XPC-206ENST00000477324 UHRF1BP1LA0JNW5 1464 aa11.87□□□□□ -0.51
XPC-206ENST00000477324 ABCC10Q5T3U5 1492 aa11.87□□□□□ -0.51
XPC-206ENST00000477324 DAPK1P53355 1430 aa11.86□□□□□ -0.51
XPC-206ENST00000477324 CFDP1Q9UEE9 299 aaPredicted RBP11.86□□□□□ -0.51
XPC-206ENST00000477324 ZNF777Q9ULD5 760 aaPredicted RBP11.86□□□□□ -0.51
XPC-206ENST00000477324 CHIC2Q9UKJ5 165 aa11.85□□□□□ -0.51
XPC-206ENST00000477324 HFM1A2PYH4 1435 aa11.85□□□□□ -0.51
XPC-206ENST00000477324 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.84□□□□□ -0.51
XPC-206ENST00000477324 ZNF644Q9H582 1327 aaPredicted RBP11.84□□□□□ -0.51
XPC-206ENST00000477324 ARHGAP5Q13017 1502 aa11.83□□□□□ -0.52
XPC-206ENST00000477324 KDM5BQ9UGL1 1544 aa11.83□□□□□ -0.52
XPC-206ENST00000477324 RRP7BPQ9NSQ0 103 aa11.83□□□□□ -0.52
XPC-206ENST00000477324 SAMD9LQ8IVG5 1584 aa11.83□□□□□ -0.52
XPC-206ENST00000477324 KDM6BO15054 1643 aa11.82□□□□□ -0.52
XPC-206ENST00000477324 NAIPQ13075 1403 aa11.82□□□□□ -0.52
XPC-206ENST00000477324 MAPKBP1O60336 1514 aa11.81□□□□□ -0.52
XPC-206ENST00000477324 CLSPNQ9HAW4 1339 aa11.81□□□□□ -0.52
XPC-206ENST00000477324 ABCC5O15440 1437 aa11.8□□□□□ -0.52
XPC-206ENST00000477324 AKNAQ7Z591 1439 aa11.8□□□□□ -0.52
XPC-206ENST00000477324 KCNH8Q96L42 1107 aa11.79□□□□□ -0.52
XPC-206ENST00000477324 ARHGEF5Q12774 1597 aa11.78□□□□□ -0.52
XPC-206ENST00000477324 SYCP2Q9BX26 1530 aa11.77□□□□□ -0.52
XPC-206ENST00000477324 WDR7Q9Y4E6 1490 aa11.76□□□□□ -0.53
XPC-206ENST00000477324 RIMBP3CA6NJZ7 1639 aa11.75□□□□□ -0.53
XPC-206ENST00000477324 RIMBP3BA6NNM3 1639 aa11.75□□□□□ -0.53
XPC-206ENST00000477324 RIMBP3Q9UFD9 1639 aa11.75□□□□□ -0.53
XPC-206ENST00000477324 TRIM52Q96A61 297 aa11.75□□□□□ -0.53
XPC-206ENST00000477324 ROCK1Q13464 1354 aa11.75□□□□□ -0.53
XPC-206ENST00000477324 SHANK2Q9UPX8 1470 aa11.75□□□□□ -0.53
XPC-206ENST00000477324 ADGRL2O95490 1459 aa11.74□□□□□ -0.53
XPC-206ENST00000477324 ABCA9Q8IUA7 1624 aa11.74□□□□□ -0.53
XPC-206ENST00000477324 C9orf84Q5VXU9 1444 aa11.73□□□□□ -0.53
XPC-206ENST00000477324 CCDC141Q6ZP82 1450 aa11.73□□□□□ -0.53
XPC-206ENST00000477324 ANKRD30AQ9BXX3 1397 aa11.72□□□□□ -0.53
XPC-206ENST00000477324 NPM1P06748 294 aaKnown RBP eCLIP11.72□□□□□ -0.53
XPC-206ENST00000477324 ABCC1P33527 1531 aa11.71□□□□□ -0.53
XPC-206ENST00000477324 PLEKHH2Q8IVE3 1493 aa11.71□□□□□ -0.53
XPC-206ENST00000477324 ASXL2Q76L83 1435 aa11.71□□□□□ -0.53
XPC-206ENST00000477324 HNRNPMP52272 730 aaKnown RBP eCLIP11.71□□□□□ -0.53
XPC-206ENST00000477324 MAST1Q9Y2H9 1570 aa11.71□□□□□ -0.54
XPC-206ENST00000477324 NEUROD1Q13562 356 aa11.7□□□□□ -0.54
XPC-206ENST00000477324 PLCH2O75038 1416 aa11.69□□□□□ -0.54
XPC-206ENST00000477324 TSPY4P0CV99 314 aa11.69□□□□□ -0.54
XPC-206ENST00000477324 TSPY10P0CW01 314 aa11.69□□□□□ -0.54
XPC-206ENST00000477324 MBD5Q9P267 1494 aa11.69□□□□□ -0.54
XPC-206ENST00000477324 NCOA1Q15788 1441 aa11.69□□□□□ -0.54
XPC-206ENST00000477324 CFAP74Q9C0B2 1584 aa11.68□□□□□ -0.54
XPC-206ENST00000477324 SIN3AQ96ST3 1273 aa11.68□□□□□ -0.54
XPC-206ENST00000477324 ARAP3Q8WWN8 1544 aa11.68□□□□□ -0.54
XPC-206ENST00000477324 PLXNC1O60486 1568 aa11.67□□□□□ -0.54
XPC-206ENST00000477324 EFCAB2Q5VUJ9 269 aa11.66□□□□□ -0.54
XPC-206ENST00000477324 KIF15Q9NS87 1388 aa11.66□□□□□ -0.54
XPC-206ENST00000477324 ANKRD50Q9ULJ7 1429 aa11.65□□□□□ -0.54
XPC-206ENST00000477324 ARHGEF12Q9NZN5 1544 aa11.65□□□□□ -0.55
XPC-206ENST00000477324 FANCAO15360 1455 aa11.64□□□□□ -0.55
XPC-206ENST00000477324 KIAA1107Q9UPP5 1409 aa11.64□□□□□ -0.55
XPC-206ENST00000477324 ACIN1Q9UKV3 1341 aaKnown RBP11.63□□□□□ -0.55
XPC-206ENST00000477324 ZNF316A6NFI3 1004 aaPredicted RBP11.63□□□□□ -0.55
XPC-206ENST00000477324 RSPH4AQ5TD94 716 aa11.63□□□□□ -0.55
XPC-206ENST00000477324 MPHOSPH9Q99550 1183 aa11.63□□□□□ -0.55
XPC-206ENST00000477324 TSPOAP1O95153 1857 aa11.63□□□□□ -0.55
XPC-206ENST00000477324 TONSLQ96HA7 1378 aa11.63□□□□□ -0.55
XPC-206ENST00000477324 DENND4BO75064 1496 aaPredicted RBP11.63□□□□□ -0.55
XPC-206ENST00000477324 PZPP20742 1482 aa11.62□□□□□ -0.55
XPC-206ENST00000477324 UNC13BO14795 1591 aa11.62□□□□□ -0.55
XPC-206ENST00000477324 CYB5RLQ6IPT4 315 aa11.61□□□□□ -0.55
XPC-206ENST00000477324 ADGRL1O94910 1474 aa11.61□□□□□ -0.55
XPC-206ENST00000477324 TRAPPC8Q9Y2L5 1435 aa11.6□□□□□ -0.55
XPC-206ENST00000477324 INO80Q9ULG1 1556 aaPredicted RBP11.6□□□□□ -0.55
XPC-206ENST00000477324 SLC4A1APQ9BWU0 796 aaKnown RBP11.6□□□□□ -0.55
XPC-206ENST00000477324 ZFYVE16Q7Z3T8 1539 aa11.6□□□□□ -0.55
XPC-206ENST00000477324 KDM5DQ9BY66 1539 aa11.6□□□□□ -0.55
XPC-206ENST00000477324 DUOX2Q9NRD8 1548 aa11.6□□□□□ -0.55
XPC-206ENST00000477324 MYT1LQ9UL68 1186 aa11.59□□□□□ -0.55
XPC-206ENST00000477324 MAP3K4Q9Y6R4 1608 aa11.59□□□□□ -0.55
XPC-206ENST00000477324 ATP7AQ04656 1500 aa11.59□□□□□ -0.55
XPC-206ENST00000477324 CD109Q6YHK3 1445 aa11.58□□□□□ -0.56
XPC-206ENST00000477324 IQGAP3Q86VI3 1631 aa11.57□□□□□ -0.56
XPC-206ENST00000477324 NUP155O75694 1391 aa11.56□□□□□ -0.56
XPC-206ENST00000477324 SCAPERQ9BY12 1400 aa11.56□□□□□ -0.56
XPC-206ENST00000477324 KIDINS220Q9ULH0 1771 aa11.56□□□□□ -0.56
XPC-206ENST00000477324 SPAG9O60271 1321 aaKnown RBP11.56□□□□□ -0.56
XPC-206ENST00000477324 FAM135AQ9P2D6 1515 aa11.55□□□□□ -0.56
XPC-206ENST00000477324 PIAS4Q8N2W9 510 aaPredicted RBP11.55□□□□□ -0.56
XPC-206ENST00000477324 DIP2BQ9P265 1576 aa11.54□□□□□ -0.56
XPC-206ENST00000477324 HECW2Q9P2P5 1572 aa11.54□□□□□ -0.56
XPC-206ENST00000477324 ERBINQ96RT1 1412 aa11.54□□□□□ -0.56
XPC-206ENST00000477324 DIEXFQ68CQ4 756 aaKnown RBP11.54□□□□□ -0.56
XPC-206ENST00000477324 TIMELESSQ9UNS1 1208 aa11.54□□□□□ -0.56
XPC-206ENST00000477324 EIF2AK4Q9P2K8 1649 aaKnown RBP11.53□□□□□ -0.56
XPC-206ENST00000477324 PKD2Q13563 968 aa11.53□□□□□ -0.56
XPC-206ENST00000477324 AFAP1Q8N556 730 aa11.53□□□□□ -0.56
XPC-206ENST00000477324 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.53□□□□□ -0.568e-7■■■□□ 18.1
XPC-206ENST00000477324 KIF13AQ9H1H9 1805 aa11.53□□□□□ -0.56
XPC-206ENST00000477324 ANKRD30BQ9BXX2 1392 aa11.53□□□□□ -0.56
XPC-206ENST00000477324 RTEL1-TNFRSF6BF6WH68 1400 aa11.52□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms