RNA–Protein interactions for RNA: ENST00000477029.5

GABBR1-211, Transcript of gamma-aminobutyric acid type B receptor subunit 1, humanhuman

TSL 3

Gene GABBR1, Length 659 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABBR1-211ENST00000477029 ARID3CA6NKF2 412 aa16.54■□□□□ 0.24
GABBR1-211ENST00000477029 EFCAB5A4FU69 1503 aa16.54■□□□□ 0.24
GABBR1-211ENST00000477029 CARMIL1Q5VZK9 1371 aa16.53■□□□□ 0.24
GABBR1-211ENST00000477029 ABCA8O94911 1581 aa16.53■□□□□ 0.24
GABBR1-211ENST00000477029 NCKAP5LQ9HCH0 1330 aa16.52■□□□□ 0.24
GABBR1-211ENST00000477029 SETD1AO15047 1707 aaKnown RBP16.51■□□□□ 0.23
GABBR1-211ENST00000477029 ZMYM4Q5VZL5 1548 aa16.5■□□□□ 0.23
GABBR1-211ENST00000477029 CAMSAP1Q5T5Y3 1602 aa16.48■□□□□ 0.23
GABBR1-211ENST00000477029 KIF27Q86VH2 1401 aa16.46■□□□□ 0.23
GABBR1-211ENST00000477029 MAGI2Q86UL8 1455 aa16.45■□□□□ 0.22
GABBR1-211ENST00000477029 UPF1Q92900 1129 aaKnown RBP eCLIP16.44■□□□□ 0.22
GABBR1-211ENST00000477029 TRAPPC8Q9Y2L5 1435 aa16.44■□□□□ 0.22
GABBR1-211ENST00000477029 ATP10BO94823 1461 aa16.41■□□□□ 0.22
GABBR1-211ENST00000477029 HECW1Q76N89 1606 aa16.41■□□□□ 0.22
GABBR1-211ENST00000477029 C3P01024 1663 aa16.4■□□□□ 0.22
GABBR1-211ENST00000477029 C9orf84Q5VXU9 1444 aa16.4■□□□□ 0.22
GABBR1-211ENST00000477029 ATP10AO60312 1499 aa16.4■□□□□ 0.22
GABBR1-211ENST00000477029 ALKQ9UM73 1620 aa16.39■□□□□ 0.21
GABBR1-211ENST00000477029 PPP6R1Q9UPN7 881 aa16.38■□□□□ 0.21
GABBR1-211ENST00000477029 PTPRKQ15262 1439 aa16.36■□□□□ 0.21
GABBR1-211ENST00000477029 PKD2Q13563 968 aa16.36■□□□□ 0.21
GABBR1-211ENST00000477029 CPS1P31327 1500 aa16.34■□□□□ 0.21
GABBR1-211ENST00000477029 TCOF1Q13428 1488 aaKnown RBP16.31■□□□□ 0.2
GABBR1-211ENST00000477029 CFAP74Q9C0B2 1584 aa16.3■□□□□ 0.2
GABBR1-211ENST00000477029 PLA2R1Q13018 1463 aa16.3■□□□□ 0.2
GABBR1-211ENST00000477029 ESF1Q9H501 851 aaKnown RBP16.28■□□□□ 0.2
GABBR1-211ENST00000477029 GOLGA3Q08378 1498 aa16.27■□□□□ 0.19
GABBR1-211ENST00000477029 SHANK2Q9UPX8 1470 aa16.27■□□□□ 0.19
GABBR1-211ENST00000477029 RAPGEF2Q9Y4G8 1499 aa16.27■□□□□ 0.19
GABBR1-211ENST00000477029 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.26■□□□□ 0.19
GABBR1-211ENST00000477029 HNRNPUL2Q1KMD3 747 aaKnown RBP16.26■□□□□ 0.19
GABBR1-211ENST00000477029 SCAPERQ9BY12 1400 aa16.25■□□□□ 0.19
GABBR1-211ENST00000477029 NPATQ14207 1427 aa16.21■□□□□ 0.19
GABBR1-211ENST00000477029 TRIM52Q96A61 297 aa16.19■□□□□ 0.18
GABBR1-211ENST00000477029 CNTLNQ9NXG0 1405 aa16.16■□□□□ 0.18
GABBR1-211ENST00000477029 SUPT6HQ7KZ85 1726 aaKnown RBP16.16■□□□□ 0.18
GABBR1-211ENST00000477029 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.15■□□□□ 0.18
GABBR1-211ENST00000477029 ZNF142P52746 1687 aaPredicted RBP16.15■□□□□ 0.18
GABBR1-211ENST00000477029 IFFO2Q5TF58 517 aa16.15■□□□□ 0.18
GABBR1-211ENST00000477029 CEP170BQ9Y4F5 1589 aaPredicted RBP16.15■□□□□ 0.18
GABBR1-211ENST00000477029 FAM9AQ8IZU1 332 aaPredicted RBP16.14■□□□□ 0.17
GABBR1-211ENST00000477029 AGLP35573 1532 aa16.14■□□□□ 0.17
GABBR1-211ENST00000477029 MYO3AQ8NEV4 1616 aa16.13■□□□□ 0.17
GABBR1-211ENST00000477029 MYT1LQ9UL68 1186 aa16.12■□□□□ 0.17
GABBR1-211ENST00000477029 VWDEQ8N2E2 1590 aa16.12■□□□□ 0.17
GABBR1-211ENST00000477029 P3H3Q8IVL6 736 aa16.11■□□□□ 0.17
GABBR1-211ENST00000477029 DIP2CQ9Y2E4 1556 aa16.1■□□□□ 0.17
GABBR1-211ENST00000477029 RNF17Q9BXT8 1623 aaKnown RBP16.1■□□□□ 0.17
GABBR1-211ENST00000477029 ZMYM3Q14202 1370 aa16.1■□□□□ 0.17
GABBR1-211ENST00000477029 LRRC7Q96NW7 1537 aa16.09■□□□□ 0.17
GABBR1-211ENST00000477029 REREQ9P2R6 1566 aa16.09■□□□□ 0.17
GABBR1-211ENST00000477029 NEURL4Q96JN8 1562 aa16.09■□□□□ 0.17
GABBR1-211ENST00000477029 PLEKHD1A6NEE1 506 aa16.08■□□□□ 0.16
GABBR1-211ENST00000477029 CTTNBP2Q8WZ74 1663 aa16.07■□□□□ 0.16
GABBR1-211ENST00000477029 RAPGEF6Q8TEU7 1601 aa16.05■□□□□ 0.16
GABBR1-211ENST00000477029 SETBP1Q9Y6X0 1596 aa16.05■□□□□ 0.16
GABBR1-211ENST00000477029 AFAP1Q8N556 730 aa16.05■□□□□ 0.16
GABBR1-211ENST00000477029 RBM33Q96EV2 1170 aaKnown RBP16.05■□□□□ 0.16
GABBR1-211ENST00000477029 ZNF518AQ6AHZ1 1483 aa16.04■□□□□ 0.16
GABBR1-211ENST00000477029 MROH2AA6NES4 1674 aa16.03■□□□□ 0.16
GABBR1-211ENST00000477029 ZRANB1Q9UGI0 708 aa16.03■□□□□ 0.16
GABBR1-211ENST00000477029 ABCA6Q8N139 1617 aa16.03■□□□□ 0.16
GABBR1-211ENST00000477029 NUP153P49790 1475 aaKnown RBP16.03■□□□□ 0.16
GABBR1-211ENST00000477029 PLCH2O75038 1416 aa16.02■□□□□ 0.16
GABBR1-211ENST00000477029 KDM5CP41229 1560 aa16.02■□□□□ 0.16
GABBR1-211ENST00000477029 POLR1AO95602 1720 aaPredicted RBP16.02■□□□□ 0.15
GABBR1-211ENST00000477029 DNMT1P26358 1616 aaKnown RBP15.99■□□□□ 0.15
GABBR1-211ENST00000477029 A2ML1A8K2U0 1454 aa15.98■□□□□ 0.15
GABBR1-211ENST00000477029 FAM135BQ49AJ0 1406 aa15.97■□□□□ 0.15
GABBR1-211ENST00000477029 RXRBP28702 533 aa15.97■□□□□ 0.15
GABBR1-211ENST00000477029 EFCAB2Q5VUJ9 269 aa15.97■□□□□ 0.15
GABBR1-211ENST00000477029 ZNF772Q68DY9 489 aaPredicted RBP15.97■□□□□ 0.15
GABBR1-211ENST00000477029 STRCP1A6NGW2 1772 aa15.97■□□□□ 0.15
GABBR1-211ENST00000477029 SYNMO15061 1565 aa15.95■□□□□ 0.14
GABBR1-211ENST00000477029 NPHP4O75161 1426 aaPredicted RBP15.94■□□□□ 0.14
GABBR1-211ENST00000477029 MLH3Q9UHC1 1453 aa15.93■□□□□ 0.14
GABBR1-211ENST00000477029 FOXD1Q16676 465 aa15.93■□□□□ 0.14
GABBR1-211ENST00000477029 ANKLE2Q86XL3 938 aa15.93■□□□□ 0.14
GABBR1-211ENST00000477029 CDK12Q9NYV4 1490 aaPredicted RBP15.91■□□□□ 0.14
GABBR1-211ENST00000477029 CLTCQ00610 1675 aaKnown RBP15.91■□□□□ 0.14
GABBR1-211ENST00000477029 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.9■□□□□ 0.14
GABBR1-211ENST00000477029 MEX3CQ5U5Q3 659 aaKnown RBP15.9■□□□□ 0.14
GABBR1-211ENST00000477029 JCADQ9P266 1359 aa15.88■□□□□ 0.13
GABBR1-211ENST00000477029 LRP6O75581 1613 aa15.88■□□□□ 0.13
GABBR1-211ENST00000477029 CDK13Q14004 1512 aaKnown RBP15.88■□□□□ 0.13
GABBR1-211ENST00000477029 MED14O60244 1454 aa15.87■□□□□ 0.13
GABBR1-211ENST00000477029 ROBO1Q9Y6N7 1651 aa15.85■□□□□ 0.13
GABBR1-211ENST00000477029 NUTM2BA6NNL0 878 aaPredicted RBP15.84■□□□□ 0.13
GABBR1-211ENST00000477029 NUTM2EB1AL46 878 aaPredicted RBP15.84■□□□□ 0.13
GABBR1-211ENST00000477029 SUPT5HO00267 1087 aaKnown RBP15.84■□□□□ 0.13
GABBR1-211ENST00000477029 NUTM2DQ5VT03 806 aaPredicted RBP15.84■□□□□ 0.13
GABBR1-211ENST00000477029 NUTM2AQ8IVF1 878 aaPredicted RBP15.84■□□□□ 0.13
GABBR1-211ENST00000477029 RGS12O14924 1447 aa15.84■□□□□ 0.13
GABBR1-211ENST00000477029 ABCC1P33527 1531 aa15.84■□□□□ 0.13
GABBR1-211ENST00000477029 IQGAP1P46940 1657 aa15.83■□□□□ 0.12
GABBR1-211ENST00000477029 MYO5CQ9NQX4 1742 aa15.82■□□□□ 0.12
GABBR1-211ENST00000477029 ARHGAP5Q13017 1502 aa15.81■□□□□ 0.12
GABBR1-211ENST00000477029 DEPDC5O75140 1603 aa15.8■□□□□ 0.12
GABBR1-211ENST00000477029 XIRP1Q702N8 1843 aaKnown RBP15.8■□□□□ 0.12
GABBR1-211ENST00000477029 SAMD9Q5K651 1589 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms