RNA–Protein interactions for RNA: ENST00000476544.1

RAB5A-208, Transcript of RAB5A, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5A, Length 532 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5A-208ENST00000476544 ADGRL1O94910 1474 aa21.69■■□□□ 1.06
RAB5A-208ENST00000476544 ARHGEF12Q9NZN5 1544 aa21.68■■□□□ 1.06
RAB5A-208ENST00000476544 YEATS2Q9ULM3 1422 aa21.65■■□□□ 1.06
RAB5A-208ENST00000476544 ZNF644Q9H582 1327 aaPredicted RBP21.65■■□□□ 1.06
RAB5A-208ENST00000476544 CFDP1Q9UEE9 299 aaPredicted RBP21.65■■□□□ 1.06
RAB5A-208ENST00000476544 ZNF777Q9ULD5 760 aaPredicted RBP21.65■■□□□ 1.06
RAB5A-208ENST00000476544 ARHGAP5Q13017 1502 aa21.65■■□□□ 1.06
RAB5A-208ENST00000476544 POGZQ7Z3K3 1410 aa21.64■■□□□ 1.06
RAB5A-208ENST00000476544 HNRNPMP52272 730 aaKnown RBP eCLIP21.64■■□□□ 1.05
RAB5A-208ENST00000476544 TRAPPC8Q9Y2L5 1435 aa21.63■■□□□ 1.05
RAB5A-208ENST00000476544 CCNB3Q8WWL7 1395 aa21.62■■□□□ 1.05
RAB5A-208ENST00000476544 CDC42BPBQ9Y5S2 1711 aa21.58■■□□□ 1.05
RAB5A-208ENST00000476544 LRRC9Q6ZRR7 1453 aa21.58■■□□□ 1.04
RAB5A-208ENST00000476544 RICTORQ6R327 1708 aa21.58■■□□□ 1.04
RAB5A-208ENST00000476544 CFAP74Q9C0B2 1584 aa21.57■■□□□ 1.04
RAB5A-208ENST00000476544 MYO5CQ9NQX4 1742 aa21.57■■□□□ 1.04
RAB5A-208ENST00000476544 TIAM1Q13009 1591 aa21.57■■□□□ 1.04
RAB5A-208ENST00000476544 MAGI2Q86UL8 1455 aa21.56■■□□□ 1.04
RAB5A-208ENST00000476544 MAP3K1Q13233 1512 aa21.55■■□□□ 1.04
RAB5A-208ENST00000476544 ZMYM4Q5VZL5 1548 aa21.55■■□□□ 1.04
RAB5A-208ENST00000476544 NCOA2Q15596 1464 aa21.55■■□□□ 1.04
RAB5A-208ENST00000476544 PREX2Q70Z35 1606 aa21.54■■□□□ 1.04
RAB5A-208ENST00000476544 EHBP1L1Q8N3D4 1523 aa21.54■■□□□ 1.04
RAB5A-208ENST00000476544 KIAA1107Q9UPP5 1409 aa21.54■■□□□ 1.04
RAB5A-208ENST00000476544 ARID4BQ4LE39 1312 aaPredicted RBP21.54■■□□□ 1.04
RAB5A-208ENST00000476544 CDC42BPAQ5VT25 1732 aa21.52■■□□□ 1.03
RAB5A-208ENST00000476544 ZNF518AQ6AHZ1 1483 aa21.52■■□□□ 1.03
RAB5A-208ENST00000476544 ABCC1P33527 1531 aa21.51■■□□□ 1.03
RAB5A-208ENST00000476544 ATP10AO60312 1499 aa21.51■■□□□ 1.03
RAB5A-208ENST00000476544 MBD5Q9P267 1494 aa21.5■■□□□ 1.03
RAB5A-208ENST00000476544 MLH3Q9UHC1 1453 aa21.5■■□□□ 1.03
RAB5A-208ENST00000476544 SAMD9LQ8IVG5 1584 aa21.49■■□□□ 1.03
RAB5A-208ENST00000476544 ZFYVE16Q7Z3T8 1539 aa21.49■■□□□ 1.03
RAB5A-208ENST00000476544 KDM5CP41229 1560 aa21.48■■□□□ 1.03
RAB5A-208ENST00000476544 ARHGEF40Q8TER5 1519 aa21.46■■□□□ 1.03
RAB5A-208ENST00000476544 APLP2Q06481 763 aa21.46■■□□□ 1.03
RAB5A-208ENST00000476544 MLECQ14165 292 aa21.46■■□□□ 1.03
RAB5A-208ENST00000476544 MYT1LQ9UL68 1186 aa21.46■■□□□ 1.03
RAB5A-208ENST00000476544 SPAG9O60271 1321 aaKnown RBP21.46■■□□□ 1.03
RAB5A-208ENST00000476544 SIGLEC1Q9BZZ2 1709 aa21.43■■□□□ 1.02
RAB5A-208ENST00000476544 PLEKHH2Q8IVE3 1493 aa21.43■■□□□ 1.02
RAB5A-208ENST00000476544 SYCP2Q9BX26 1530 aa21.43■■□□□ 1.02
RAB5A-208ENST00000476544 C9orf84Q5VXU9 1444 aa21.4■■□□□ 1.02
RAB5A-208ENST00000476544 ADAMTSL3P82987 1691 aa21.38■■□□□ 1.01
RAB5A-208ENST00000476544 RSPH4AQ5TD94 716 aa21.38■■□□□ 1.01
RAB5A-208ENST00000476544 SUPT6HQ7KZ85 1726 aaKnown RBP21.37■■□□□ 1.01
RAB5A-208ENST00000476544 ITSN2Q9NZM3 1697 aa21.37■■□□□ 1.01
RAB5A-208ENST00000476544 PTPRMP28827 1452 aa21.36■■□□□ 1.01
RAB5A-208ENST00000476544 MYOM3Q5VTT5 1437 aa21.36■■□□□ 1.01
RAB5A-208ENST00000476544 DIP2CQ9Y2E4 1556 aa21.36■■□□□ 1.01
RAB5A-208ENST00000476544 CAMSAP2Q08AD1 1489 aa21.34■■□□□ 1.01
RAB5A-208ENST00000476544 MIA2Q96PC5 1412 aa21.34■■□□□ 1.01
RAB5A-208ENST00000476544 HECW2Q9P2P5 1572 aa21.34■■□□□ 1.01
RAB5A-208ENST00000476544 KIDINS220Q9ULH0 1771 aa21.33■■□□□ 1.01
RAB5A-208ENST00000476544 BCORL1Q5H9F3 1711 aa21.33■■□□□ 1.01
RAB5A-208ENST00000476544 PPARGC1BQ86YN6 1023 aaKnown RBP21.32■■□□□ 1
RAB5A-208ENST00000476544 RTEL1-TNFRSF6BF6WH68 1400 aa21.31■■□□□ 1
RAB5A-208ENST00000476544 ABCA6Q8N139 1617 aa21.31■■□□□ 1
RAB5A-208ENST00000476544 CEBPAP49715 358 aaPredicted RBP21.31■■□□□ 1
RAB5A-208ENST00000476544 TSPY4P0CV99 314 aa21.29■■□□□ 1
RAB5A-208ENST00000476544 TSPY10P0CW01 314 aa21.29■■□□□ 1
RAB5A-208ENST00000476544 AGLP35573 1532 aa21.29■■□□□ 1
RAB5A-208ENST00000476544 REREQ9P2R6 1566 aa21.28■■□□□ 1
RAB5A-208ENST00000476544 MADDQ8WXG6 1647 aa21.27■■□□□ 1
RAB5A-208ENST00000476544 ATP7AQ04656 1500 aa21.27■■□□□ 1
RAB5A-208ENST00000476544 CCDC141Q6ZP82 1450 aa21.26■□□□□ 0.99
RAB5A-208ENST00000476544 DHX29Q7Z478 1369 aaKnown RBP21.26■□□□□ 0.99
RAB5A-208ENST00000476544 PLPPR3Q6T4P5 718 aa21.26■□□□□ 0.99
RAB5A-208ENST00000476544 A2MP01023 1474 aa21.26■□□□□ 0.99
RAB5A-208ENST00000476544 ABCC5O15440 1437 aa21.24■□□□□ 0.99
RAB5A-208ENST00000476544 FGD6Q6ZV73 1430 aa21.24■□□□□ 0.99
RAB5A-208ENST00000476544 INO80Q9ULG1 1556 aaPredicted RBP21.23■□□□□ 0.99
RAB5A-208ENST00000476544 GGT6Q6P531 493 aa21.22■□□□□ 0.99
RAB5A-208ENST00000476544 ARHGEF5Q12774 1597 aa21.21■□□□□ 0.99
RAB5A-208ENST00000476544 KIF3BO15066 747 aa21.19■□□□□ 0.98
RAB5A-208ENST00000476544 TCOF1Q13428 1488 aaKnown RBP21.19■□□□□ 0.98
RAB5A-208ENST00000476544 PLXNC1O60486 1568 aa21.17■□□□□ 0.98
RAB5A-208ENST00000476544 ZMYM3Q14202 1370 aa21.15■□□□□ 0.98
RAB5A-208ENST00000476544 RRP7BPQ9NSQ0 103 aa21.15■□□□□ 0.98
RAB5A-208ENST00000476544 CHIC2Q9UKJ5 165 aa21.15■□□□□ 0.98
RAB5A-208ENST00000476544 PPP6R1Q9UPN7 881 aa21.15■□□□□ 0.98
RAB5A-208ENST00000476544 FAM50AQ14320 339 aaKnown RBP21.14■□□□□ 0.97
RAB5A-208ENST00000476544 RIMS1Q86UR5 1692 aaKnown RBP21.14■□□□□ 0.97
RAB5A-208ENST00000476544 DAPK1P53355 1430 aa21.12■□□□□ 0.97
RAB5A-208ENST00000476544 PTPN23Q9H3S7 1636 aa21.12■□□□□ 0.97
RAB5A-208ENST00000476544 ESF1Q9H501 851 aaKnown RBP21.12■□□□□ 0.97
RAB5A-208ENST00000476544 HSPA2P54652 639 aa21.11■□□□□ 0.97
RAB5A-208ENST00000476544 PTPRKQ15262 1439 aa21.1■□□□□ 0.97
RAB5A-208ENST00000476544 MAST1Q9Y2H9 1570 aa21.09■□□□□ 0.97
RAB5A-208ENST00000476544 LMTK3Q96Q04 1460 aa21.08■□□□□ 0.97
RAB5A-208ENST00000476544 CNTLNQ9NXG0 1405 aa21.07■□□□□ 0.96
RAB5A-208ENST00000476544 NCOA1Q15788 1441 aa21.06■□□□□ 0.96
RAB5A-208ENST00000476544 FBXO31Q5XUX0 539 aaPredicted RBP21.06■□□□□ 0.96
RAB5A-208ENST00000476544 KIF15Q9NS87 1388 aa21.05■□□□□ 0.96
RAB5A-208ENST00000476544 FER1L4A9Z1Z3 1794 aa21.04■□□□□ 0.96
RAB5A-208ENST00000476544 WASHC2CQ9Y4E1 1318 aa21.04■□□□□ 0.96
RAB5A-208ENST00000476544 ADGBQ8N7X0 1667 aa21.03■□□□□ 0.96
RAB5A-208ENST00000476544 SHANK2Q9UPX8 1470 aa21.03■□□□□ 0.96
RAB5A-208ENST00000476544 DNMT1P26358 1616 aaKnown RBP21■□□□□ 0.95
RAB5A-208ENST00000476544 ANKRD30AQ9BXX3 1397 aa21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms