RNA–Protein interactions for RNA: ENST00000475973.1

UBR4-212, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 600 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-212ENST00000475973 EPRSP07814 1512 aaKnown RBP10.28□□□□□ -0.76
UBR4-212ENST00000475973 UBTFP17480 764 aaKnown RBP10.27□□□□□ -0.77
UBR4-212ENST00000475973 TEX14Q8IWB6 1497 aa10.27□□□□□ -0.77
UBR4-212ENST00000475973 WDR7Q9Y4E6 1490 aa10.27□□□□□ -0.77
UBR4-212ENST00000475973 ZCCHC11Q5TAX3 1644 aaKnown RBP10.25□□□□□ -0.77
UBR4-212ENST00000475973 RRBP1Q9P2E9 1410 aaKnown RBP10.25□□□□□ -0.77
UBR4-212ENST00000475973 ABCA8O94911 1581 aa10.24□□□□□ -0.77
UBR4-212ENST00000475973 MAP3K1Q13233 1512 aa10.23□□□□□ -0.77
UBR4-212ENST00000475973 POTEDQ86YR6 584 aa10.21□□□□□ -0.77
UBR4-212ENST00000475973 CENPBP07199 599 aaPredicted RBP10.2□□□□□ -0.78
UBR4-212ENST00000475973 P3H3Q8IVL6 736 aa10.2□□□□□ -0.78
UBR4-212ENST00000475973 MAP3K4Q9Y6R4 1608 aa10.2□□□□□ -0.78
UBR4-212ENST00000475973 SAMD9Q5K651 1589 aa10.19□□□□□ -0.78
UBR4-212ENST00000475973 DHX57Q6P158 1386 aaKnown RBP10.19□□□□□ -0.78
UBR4-212ENST00000475973 CD109Q6YHK3 1445 aa10.18□□□□□ -0.78
UBR4-212ENST00000475973 ZBTB12Q9Y330 459 aaPredicted RBP10.18□□□□□ -0.78
UBR4-212ENST00000475973 TSPOAP1O95153 1857 aa10.18□□□□□ -0.78
UBR4-212ENST00000475973 MAGI3Q5TCQ9 1506 aa10.17□□□□□ -0.78
UBR4-212ENST00000475973 ARID3CA6NKF2 412 aa10.17□□□□□ -0.78
UBR4-212ENST00000475973 KCNH8Q96L42 1107 aa10.17□□□□□ -0.78
UBR4-212ENST00000475973 PPRC1Q5VV67 1664 aaKnown RBP10.17□□□□□ -0.78
UBR4-212ENST00000475973 EFCAB5A4FU69 1503 aa10.17□□□□□ -0.78
UBR4-212ENST00000475973 FHOD3Q2V2M9 1422 aa10.16□□□□□ -0.78
UBR4-212ENST00000475973 RANGAP1P46060 587 aaPredicted RBP10.16□□□□□ -0.78
UBR4-212ENST00000475973 ATP10BO94823 1461 aa10.16□□□□□ -0.78
UBR4-212ENST00000475973 ARHGAP35Q9NRY4 1499 aa10.15□□□□□ -0.78
UBR4-212ENST00000475973 RAPGEF6Q8TEU7 1601 aa10.15□□□□□ -0.79
UBR4-212ENST00000475973 ABCB7O75027 752 aa10.14□□□□□ -0.79
UBR4-212ENST00000475973 CFAP43Q8NDM7 1665 aa10.14□□□□□ -0.79
UBR4-212ENST00000475973 COL17A1Q9UMD9 1497 aaPredicted RBP10.13□□□□□ -0.79
UBR4-212ENST00000475973 VASPP50552 380 aaPredicted RBP10.13□□□□□ -0.79
UBR4-212ENST00000475973 NUP153P49790 1475 aaKnown RBP10.12□□□□□ -0.79
UBR4-212ENST00000475973 KDM4FA0A1W2PPD8 638 aa10.12□□□□□ -0.79
UBR4-212ENST00000475973 GTF3C3Q9Y5Q9 886 aa10.12□□□□□ -0.79
UBR4-212ENST00000475973 PHLDB1Q86UU1 1377 aa10.12□□□□□ -0.79
UBR4-212ENST00000475973 ADGRL1O94910 1474 aa10.1□□□□□ -0.79
UBR4-212ENST00000475973 FMN1Q68DA7 1419 aa10.09□□□□□ -0.79
UBR4-212ENST00000475973 ABCA9Q8IUA7 1624 aa10.09□□□□□ -0.79
UBR4-212ENST00000475973 PLEKHD1A6NEE1 506 aa10.09□□□□□ -0.79
UBR4-212ENST00000475973 KANK4Q5T7N3 995 aaPredicted RBP10.09□□□□□ -0.79
UBR4-212ENST00000475973 MIER1Q8N108 512 aa10.09□□□□□ -0.79
UBR4-212ENST00000475973 ARAP3Q8WWN8 1544 aa10.08□□□□□ -0.8
UBR4-212ENST00000475973 NEO1Q92859 1461 aa10.08□□□□□ -0.8
UBR4-212ENST00000475973 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.07□□□□□ -0.8
UBR4-212ENST00000475973 DSG3P32926 999 aa10.07□□□□□ -0.8
UBR4-212ENST00000475973 CCNB3Q8WWL7 1395 aa10.06□□□□□ -0.8
UBR4-212ENST00000475973 TIAM1Q13009 1591 aa10.05□□□□□ -0.8
UBR4-212ENST00000475973 IFNLR1Q8IU57 520 aaPredicted RBP10.05□□□□□ -0.8
UBR4-212ENST00000475973 HECW1Q76N89 1606 aa10.04□□□□□ -0.8
UBR4-212ENST00000475973 ATP1B4Q9UN42 357 aaPredicted RBP10.03□□□□□ -0.8
UBR4-212ENST00000475973 CDK11AQ9UQ88 783 aaPredicted RBP10.03□□□□□ -0.8
UBR4-212ENST00000475973 CDK13Q14004 1512 aaKnown RBP10.02□□□□□ -0.8
UBR4-212ENST00000475973 CFAP74Q9C0B2 1584 aa10.02□□□□□ -0.81
UBR4-212ENST00000475973 FANCAO15360 1455 aa10.02□□□□□ -0.81
UBR4-212ENST00000475973 DENND4BO75064 1496 aaPredicted RBP10.01□□□□□ -0.81
UBR4-212ENST00000475973 LRRC9Q6ZRR7 1453 aa10.01□□□□□ -0.81
UBR4-212ENST00000475973 RAPGEF3O95398 923 aa10□□□□□ -0.81
UBR4-212ENST00000475973 TIMELESSQ9UNS1 1208 aa10□□□□□ -0.81
UBR4-212ENST00000475973 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10□□□□□ -0.81
UBR4-212ENST00000475973 AKNAQ7Z591 1439 aa9.99□□□□□ -0.81
UBR4-212ENST00000475973 TTC37Q6PGP7 1564 aa9.98□□□□□ -0.81
UBR4-212ENST00000475973 MYT1Q01538 1121 aa9.98□□□□□ -0.81
UBR4-212ENST00000475973 ZNF692Q9BU19 519 aaPredicted RBP9.98□□□□□ -0.81
UBR4-212ENST00000475973 TROQ12816 1431 aaPredicted RBP9.98□□□□□ -0.81
UBR4-212ENST00000475973 ARHGEF40Q8TER5 1519 aa9.97□□□□□ -0.81
UBR4-212ENST00000475973 FRMPD1Q5SYB0 1578 aa9.97□□□□□ -0.81
UBR4-212ENST00000475973 KIF14Q15058 1648 aa9.97□□□□□ -0.81
UBR4-212ENST00000475973 ARID4BQ4LE39 1312 aaPredicted RBP9.97□□□□□ -0.81
UBR4-212ENST00000475973 PLCH2O75038 1416 aa9.97□□□□□ -0.81
UBR4-212ENST00000475973 CCDC18Q5T9S5 1454 aa9.97□□□□□ -0.81
UBR4-212ENST00000475973 SPDYE2BA6NHP3 402 aa9.95□□□□□ -0.82
UBR4-212ENST00000475973 SPDYE6P0CI01 402 aa9.95□□□□□ -0.82
UBR4-212ENST00000475973 SPDYE2Q495Y8 402 aa9.95□□□□□ -0.82
UBR4-212ENST00000475973 RAB3GAP2Q9H2M9 1393 aa9.95□□□□□ -0.82
UBR4-212ENST00000475973 POGZQ7Z3K3 1410 aa9.95□□□□□ -0.82
UBR4-212ENST00000475973 CASKIN1Q8WXD9 1431 aa9.95□□□□□ -0.82
UBR4-212ENST00000475973 SETD5Q9C0A6 1442 aa9.95□□□□□ -0.82
UBR4-212ENST00000475973 MAGI2Q86UL8 1455 aa9.95□□□□□ -0.82
UBR4-212ENST00000475973 ZMYM4Q5VZL5 1548 aa9.95□□□□□ -0.82
UBR4-212ENST00000475973 ZFYVE16Q7Z3T8 1539 aa9.94□□□□□ -0.82
UBR4-212ENST00000475973 FYCO1Q9BQS8 1478 aa9.94□□□□□ -0.82
UBR4-212ENST00000475973 EFCAB2Q5VUJ9 269 aa9.94□□□□□ -0.82
UBR4-212ENST00000475973 SSUH2Q9Y2M2 353 aa9.94□□□□□ -0.82
UBR4-212ENST00000475973 PCF11O94913 1555 aaKnown RBP9.93□□□□□ -0.82
UBR4-212ENST00000475973 SCAPERQ9BY12 1400 aa9.93□□□□□ -0.82
UBR4-212ENST00000475973 HECW2Q9P2P5 1572 aa9.92□□□□□ -0.82
UBR4-212ENST00000475973 ARHGAP5Q13017 1502 aa9.92□□□□□ -0.82
UBR4-212ENST00000475973 PTPRMP28827 1452 aa9.91□□□□□ -0.82
UBR4-212ENST00000475973 ZNF518AQ6AHZ1 1483 aa9.91□□□□□ -0.82
UBR4-212ENST00000475973 STAG3Q9UJ98 1225 aa9.91□□□□□ -0.82
UBR4-212ENST00000475973 YEATS2Q9ULM3 1422 aa9.9□□□□□ -0.82
UBR4-212ENST00000475973 RICTORQ6R327 1708 aa9.9□□□□□ -0.82
UBR4-212ENST00000475973 C9orf84Q5VXU9 1444 aa9.9□□□□□ -0.83
UBR4-212ENST00000475973 PKD2Q13563 968 aa9.89□□□□□ -0.83
UBR4-212ENST00000475973 ADAMTSL3P82987 1691 aa9.89□□□□□ -0.83
UBR4-212ENST00000475973 BCORL1Q5H9F3 1711 aa9.88□□□□□ -0.83
UBR4-212ENST00000475973 MYO5CQ9NQX4 1742 aa9.88□□□□□ -0.83
UBR4-212ENST00000475973 MYT1LQ9UL68 1186 aa9.88□□□□□ -0.83
UBR4-212ENST00000475973 MADDQ8WXG6 1647 aa9.88□□□□□ -0.83
UBR4-212ENST00000475973 PPP1R15AO75807 674 aaPredicted RBP9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms