RNA–Protein interactions for RNA: ENST00000475605.1

CDPF1-206, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

TSL 2

Gene CDPF1, Length 655 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-206ENST00000475605 ARHGAP35Q9NRY4 1499 aa26.11■■□□□ 1.77
CDPF1-206ENST00000475605 MLECQ14165 292 aa26.1■■□□□ 1.77
CDPF1-206ENST00000475605 POGZQ7Z3K3 1410 aa26.09■■□□□ 1.77
CDPF1-206ENST00000475605 MAGI2Q86UL8 1455 aa26.09■■□□□ 1.77
CDPF1-206ENST00000475605 FMN1Q68DA7 1419 aa26.08■■□□□ 1.77
CDPF1-206ENST00000475605 HSPA2P54652 639 aa26.07■■□□□ 1.76
CDPF1-206ENST00000475605 KIF14Q15058 1648 aa26.03■■□□□ 1.76
CDPF1-206ENST00000475605 EFCAB2Q5VUJ9 269 aa26.03■■□□□ 1.76
CDPF1-206ENST00000475605 CHIC1Q5VXU3 224 aa26.03■■□□□ 1.76
CDPF1-206ENST00000475605 MYO5CQ9NQX4 1742 aa26.02■■□□□ 1.76
CDPF1-206ENST00000475605 CDK11AQ9UQ88 783 aaPredicted RBP26.01■■□□□ 1.75
CDPF1-206ENST00000475605 FER1L4A9Z1Z3 1794 aa25.99■■□□□ 1.75
CDPF1-206ENST00000475605 ATP10AO60312 1499 aa25.98■■□□□ 1.75
CDPF1-206ENST00000475605 LRRIQ1Q96JM4 1722 aa25.97■■□□□ 1.75
CDPF1-206ENST00000475605 TROQ12816 1431 aaPredicted RBP25.97■■□□□ 1.75
CDPF1-206ENST00000475605 C9orf84Q5VXU9 1444 aa25.95■■□□□ 1.74
CDPF1-206ENST00000475605 AFAP1Q8N556 730 aa25.94■■□□□ 1.74
CDPF1-206ENST00000475605 ARHGEF12Q9NZN5 1544 aa25.93■■□□□ 1.74
CDPF1-206ENST00000475605 ARHGAP5Q13017 1502 aa25.93■■□□□ 1.74
CDPF1-206ENST00000475605 CLIP1P30622 1438 aa25.9■■□□□ 1.74
CDPF1-206ENST00000475605 CEBPAP49715 358 aaPredicted RBP25.9■■□□□ 1.74
CDPF1-206ENST00000475605 ZNF518AQ6AHZ1 1483 aa25.9■■□□□ 1.74
CDPF1-206ENST00000475605 KDM5CP41229 1560 aa25.87■■□□□ 1.73
CDPF1-206ENST00000475605 MYT1LQ9UL68 1186 aa25.87■■□□□ 1.73
CDPF1-206ENST00000475605 CDC42BPBQ9Y5S2 1711 aa25.85■■□□□ 1.73
CDPF1-206ENST00000475605 DIP2CQ9Y2E4 1556 aa25.82■■□□□ 1.72
CDPF1-206ENST00000475605 PREX1Q8TCU6 1659 aa25.8■■□□□ 1.72
CDPF1-206ENST00000475605 CASKIN1Q8WXD9 1431 aa25.8■■□□□ 1.72
CDPF1-206ENST00000475605 TRAPPC8Q9Y2L5 1435 aa25.8■■□□□ 1.72
CDPF1-206ENST00000475605 ABCA6Q8N139 1617 aa25.78■■□□□ 1.72
CDPF1-206ENST00000475605 PREX2Q70Z35 1606 aa25.77■■□□□ 1.72
CDPF1-206ENST00000475605 CERKQ8TCT0 537 aa25.77■■□□□ 1.72
CDPF1-206ENST00000475605 MLH3Q9UHC1 1453 aa25.77■■□□□ 1.72
CDPF1-206ENST00000475605 CCDC18Q5T9S5 1454 aa25.76■■□□□ 1.71
CDPF1-206ENST00000475605 ABCC1P33527 1531 aa25.75■■□□□ 1.71
CDPF1-206ENST00000475605 REREQ9P2R6 1566 aa25.74■■□□□ 1.71
CDPF1-206ENST00000475605 ITSN2Q9NZM3 1697 aa25.73■■□□□ 1.71
CDPF1-206ENST00000475605 CDC42BPAQ5VT25 1732 aa25.71■■□□□ 1.71
CDPF1-206ENST00000475605 UHRF1BP1Q6BDS2 1440 aa25.7■■□□□ 1.7
CDPF1-206ENST00000475605 STRCQ7RTU9 1775 aa25.69■■□□□ 1.7
CDPF1-206ENST00000475605 KIDINS220Q9ULH0 1771 aa25.68■■□□□ 1.7
CDPF1-206ENST00000475605 AGLP35573 1532 aa25.68■■□□□ 1.7
CDPF1-206ENST00000475605 C3P01024 1663 aa25.68■■□□□ 1.7
CDPF1-206ENST00000475605 ZNF777Q9ULD5 760 aaPredicted RBP25.67■■□□□ 1.7
CDPF1-206ENST00000475605 SETD1BQ9UPS6 1966 aaKnown RBP25.67■■□□□ 1.7
CDPF1-206ENST00000475605 FYCO1Q9BQS8 1478 aa25.66■■□□□ 1.7
CDPF1-206ENST00000475605 ESF1Q9H501 851 aaKnown RBP25.64■■□□□ 1.7
CDPF1-206ENST00000475605 SAMD9LQ8IVG5 1584 aa25.62■■□□□ 1.69
CDPF1-206ENST00000475605 DMRT2Q9Y5R5 561 aa25.62■■□□□ 1.69
CDPF1-206ENST00000475605 GPATCH8Q9UKJ3 1502 aaKnown RBP25.61■■□□□ 1.69
CDPF1-206ENST00000475605 HNRNPMP52272 730 aaKnown RBP eCLIP25.6■■□□□ 1.69
CDPF1-206ENST00000475605 SYCP2Q9BX26 1530 aa25.59■■□□□ 1.69
CDPF1-206ENST00000475605 SPAG9O60271 1321 aaKnown RBP25.56■■□□□ 1.68
CDPF1-206ENST00000475605 CNTLNQ9NXG0 1405 aa25.54■■□□□ 1.68
CDPF1-206ENST00000475605 SUPT6HQ7KZ85 1726 aaKnown RBP25.52■■□□□ 1.68
CDPF1-206ENST00000475605 CFDP1Q9UEE9 299 aaPredicted RBP25.52■■□□□ 1.68
CDPF1-206ENST00000475605 PTPRTO14522 1441 aa25.52■■□□□ 1.68
CDPF1-206ENST00000475605 ATP7AQ04656 1500 aa25.49■■□□□ 1.67
CDPF1-206ENST00000475605 ZMYM3Q14202 1370 aa25.49■■□□□ 1.67
CDPF1-206ENST00000475605 CCNB3Q8WWL7 1395 aa25.49■■□□□ 1.67
CDPF1-206ENST00000475605 KIAA1107Q9UPP5 1409 aa25.48■■□□□ 1.67
CDPF1-206ENST00000475605 MROH2AA6NES4 1674 aa25.47■■□□□ 1.67
CDPF1-206ENST00000475605 NCOA1Q15788 1441 aa25.46■■□□□ 1.67
CDPF1-206ENST00000475605 MTUS2Q5JR59 1369 aa25.46■■□□□ 1.67
CDPF1-206ENST00000475605 INO80Q9ULG1 1556 aaPredicted RBP25.45■■□□□ 1.66
CDPF1-206ENST00000475605 PLEKHH2Q8IVE3 1493 aa25.45■■□□□ 1.66
CDPF1-206ENST00000475605 NPATQ14207 1427 aa25.45■■□□□ 1.66
CDPF1-206ENST00000475605 ZNF644Q9H582 1327 aaPredicted RBP25.44■■□□□ 1.66
CDPF1-206ENST00000475605 A2MP01023 1474 aa25.44■■□□□ 1.66
CDPF1-206ENST00000475605 PLXNC1O60486 1568 aa25.44■■□□□ 1.66
CDPF1-206ENST00000475605 CLTCQ00610 1675 aaKnown RBP25.43■■□□□ 1.66
CDPF1-206ENST00000475605 LTBP4Q8N2S1 1624 aa25.43■■□□□ 1.66
CDPF1-206ENST00000475605 CAMSAP1Q5T5Y3 1602 aa25.42■■□□□ 1.66
CDPF1-206ENST00000475605 GGT6Q6P531 493 aa25.42■■□□□ 1.66
CDPF1-206ENST00000475605 NCKAP5LQ9HCH0 1330 aa25.39■■□□□ 1.66
CDPF1-206ENST00000475605 TIAM1Q13009 1591 aa25.39■■□□□ 1.65
CDPF1-206ENST00000475605 PTPRKQ15262 1439 aa25.36■■□□□ 1.65
CDPF1-206ENST00000475605 MBD5Q9P267 1494 aa25.35■■□□□ 1.65
CDPF1-206ENST00000475605 MYO3AQ8NEV4 1616 aa25.34■■□□□ 1.65
CDPF1-206ENST00000475605 DISP3Q9P2K9 1392 aa25.33■■□□□ 1.65
CDPF1-206ENST00000475605 EHBP1L1Q8N3D4 1523 aa25.33■■□□□ 1.65
CDPF1-206ENST00000475605 ADGBQ8N7X0 1667 aa25.33■■□□□ 1.65
CDPF1-206ENST00000475605 ZNF142P52746 1687 aaPredicted RBP25.3■■□□□ 1.64
CDPF1-206ENST00000475605 ILDR2Q71H61 639 aa25.3■■□□□ 1.64
CDPF1-206ENST00000475605 CEP162Q5TB80 1403 aa25.29■■□□□ 1.64
CDPF1-206ENST00000475605 CEP170BQ9Y4F5 1589 aaPredicted RBP25.29■■□□□ 1.64
CDPF1-206ENST00000475605 ZNF335Q9H4Z2 1342 aaPredicted RBP25.29■■□□□ 1.64
CDPF1-206ENST00000475605 IQSEC2Q5JU85 1478 aa25.28■■□□□ 1.64
CDPF1-206ENST00000475605 PPP6R1Q9UPN7 881 aa25.27■■□□□ 1.64
CDPF1-206ENST00000475605 RTEL1-TNFRSF6BF6WH68 1400 aa25.27■■□□□ 1.64
CDPF1-206ENST00000475605 DHX29Q7Z478 1369 aaKnown RBP25.26■■□□□ 1.63
CDPF1-206ENST00000475605 PLA2R1Q13018 1463 aa25.26■■□□□ 1.63
CDPF1-206ENST00000475605 PKD2Q13563 968 aa25.25■■□□□ 1.63
CDPF1-206ENST00000475605 TCOF1Q13428 1488 aaKnown RBP25.24■■□□□ 1.63
CDPF1-206ENST00000475605 NCOA2Q15596 1464 aa25.22■■□□□ 1.63
CDPF1-206ENST00000475605 KIF3BO15066 747 aa25.21■■□□□ 1.63
CDPF1-206ENST00000475605 FBXO31Q5XUX0 539 aaPredicted RBP25.2■■□□□ 1.62
CDPF1-206ENST00000475605 CAMSAP2Q08AD1 1489 aa25.2■■□□□ 1.62
CDPF1-206ENST00000475605 A2ML1A8K2U0 1454 aa25.19■■□□□ 1.62
CDPF1-206ENST00000475605 CCDC141Q6ZP82 1450 aa25.19■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms