RNA–Protein interactions for RNA: ENST00000474612.1

NOTCH4-204, Transcript of notch 4, humanhuman

TSL 5

Gene NOTCH4, Length 5,267 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4-204ENST00000474612 KANK4Q5T7N3 995 aaPredicted RBP23.21■■□□□ 1.31
NOTCH4-204ENST00000474612 RTF1Q92541 710 aaKnown RBP23.21■■□□□ 1.31
NOTCH4-204ENST00000474612 WASHC2CQ9Y4E1 1318 aa23.2■■□□□ 1.3
NOTCH4-204ENST00000474612 PAK3O75914 559 aaPredicted RBP23.2■■□□□ 1.3
NOTCH4-204ENST00000474612 CCDC18Q5T9S5 1454 aa23.19■■□□□ 1.3
NOTCH4-204ENST00000474612 OSCARQ8IYS5 282 aa23.19■■□□□ 1.3
NOTCH4-204ENST00000474612 HNRNPMP52272 730 aaKnown RBP eCLIP23.18■■□□□ 1.3
NOTCH4-204ENST00000474612 MPHOSPH9Q99550 1183 aa23.18■■□□□ 1.3
NOTCH4-204ENST00000474612 GOLGA2Q08379 1002 aa23.17■■□□□ 1.3
NOTCH4-204ENST00000474612 GOLGA6L22H0YM25 854 aa23.17■■□□□ 1.3
NOTCH4-204ENST00000474612 FANCD2Q9BXW9 1451 aa23.16■■□□□ 1.3
NOTCH4-204ENST00000474612 CSB-PGBD3P0DP91 1061 aa23.16■■□□□ 1.3
NOTCH4-204ENST00000474612 WIZO95785 1651 aa23.14■■□□□ 1.3
NOTCH4-204ENST00000474612 EIF3AQ14152 1382 aaKnown RBP23.14■■□□□ 1.29
NOTCH4-204ENST00000474612 ROCK2O75116 1388 aaKnown RBP23.12■■□□□ 1.29
NOTCH4-204ENST00000474612 FHOD3Q2V2M9 1422 aa23.12■■□□□ 1.29
NOTCH4-204ENST00000474612 FOXD1Q16676 465 aa23.12■■□□□ 1.29
NOTCH4-204ENST00000474612 PTPRGP23470 1445 aa23.11■■□□□ 1.29
NOTCH4-204ENST00000474612 CYB5RLQ6IPT4 315 aa23.11■■□□□ 1.29
NOTCH4-204ENST00000474612 HSPA5P11021 654 aaKnown RBP23.1■■□□□ 1.29
NOTCH4-204ENST00000474612 SUPT16HQ9Y5B9 1047 aaKnown RBP23.1■■□□□ 1.29
NOTCH4-204ENST00000474612 ZRSR1Q15695 479 aaKnown RBP23.09■■□□□ 1.29
NOTCH4-204ENST00000474612 ANP32EQ9BTT0 268 aa23.09■■□□□ 1.29
NOTCH4-204ENST00000474612 KTN1Q86UP2 1357 aaKnown RBP23.09■■□□□ 1.29
NOTCH4-204ENST00000474612 CALD1Q05682 793 aaKnown RBP23.08■■□□□ 1.28
NOTCH4-204ENST00000474612 CHMP4AQ9BY43 222 aa23.08■■□□□ 1.28
NOTCH4-204ENST00000474612 TERF2IPQ9NYB0 399 aa23.07■■□□□ 1.28
NOTCH4-204ENST00000474612 SMARCA4P51532 1647 aa23.05■■□□□ 1.28
NOTCH4-204ENST00000474612 FGD1P98174 961 aa23.03■■□□□ 1.28
NOTCH4-204ENST00000474612 NBR1Q14596 966 aa23.03■■□□□ 1.28
NOTCH4-204ENST00000474612 KCNJ4P48050 445 aa23.02■■□□□ 1.28
NOTCH4-204ENST00000474612 RAB3GAP2Q9H2M9 1393 aa23.02■■□□□ 1.28
NOTCH4-204ENST00000474612 NGDNQ8NEJ9 315 aaKnown RBP23.02■■□□□ 1.27
NOTCH4-204ENST00000474612 CCDC9Q9Y3X0 531 aaKnown RBP23.01■■□□□ 1.27
NOTCH4-204ENST00000474612 U2AF1L5P0DN76 240 aaPredicted RBP23■■□□□ 1.27
NOTCH4-204ENST00000474612 U2AF1Q01081 240 aaKnown RBP eCLIP23■■□□□ 1.27
NOTCH4-204ENST00000474612 IPO8O15397 1037 aaKnown RBP22.98■■□□□ 1.27
NOTCH4-204ENST00000474612 RGS3P49796 1198 aa22.98■■□□□ 1.27
NOTCH4-204ENST00000474612 PPP4R2Q9NY27 417 aa22.98■■□□□ 1.27
NOTCH4-204ENST00000474612 RALBP1Q15311 655 aa22.97■■□□□ 1.27
NOTCH4-204ENST00000474612 CCER2I3L3R5 266 aa22.96■■□□□ 1.27
NOTCH4-204ENST00000474612 NUTM2DQ5VT03 806 aaPredicted RBP22.92■■□□□ 1.26
NOTCH4-204ENST00000474612 CFAP44Q96MT7 982 aa22.91■■□□□ 1.26
NOTCH4-204ENST00000474612 TMX4Q9H1E5 349 aaPredicted RBP22.9■■□□□ 1.26
NOTCH4-204ENST00000474612 ZNF330Q9Y3S2 320 aaPredicted RBP22.89■■□□□ 1.26
NOTCH4-204ENST00000474612 UACAQ9BZF9 1416 aa22.89■■□□□ 1.26
NOTCH4-204ENST00000474612 VGFO15240 615 aaPredicted RBP22.89■■□□□ 1.25
NOTCH4-204ENST00000474612 GAPVD1Q14C86 1478 aa22.88■■□□□ 1.25
NOTCH4-204ENST00000474612 AMPHP49418 695 aa22.88■■□□□ 1.25
NOTCH4-204ENST00000474612 NAP1L2Q9ULW6 460 aaPredicted RBP22.87■■□□□ 1.25
NOTCH4-204ENST00000474612 L3MBTL2Q969R5 705 aa22.87■■□□□ 1.25
NOTCH4-204ENST00000474612 STK31Q9BXU1 1019 aa22.86■■□□□ 1.25
NOTCH4-204ENST00000474612 HDAC5Q9UQL6 1122 aa22.86■■□□□ 1.25
NOTCH4-204ENST00000474612 MCCP23508 829 aa22.85■■□□□ 1.25
NOTCH4-204ENST00000474612 CCDC144AA2RUR9 1427 aa22.85■■□□□ 1.25
NOTCH4-204ENST00000474612 TRAK1Q9UPV9 953 aa22.83■■□□□ 1.25
NOTCH4-204ENST00000474612 FAM69CQ0P6D2 419 aa22.83■■□□□ 1.24
NOTCH4-204ENST00000474612 TRIM44Q96DX7 344 aaPredicted RBP22.82■■□□□ 1.24
NOTCH4-204ENST00000474612 TAOK2Q9UL54 1235 aa22.82■■□□□ 1.24
NOTCH4-204ENST00000474612 LMOD3Q0VAK6 560 aa22.82■■□□□ 1.24
NOTCH4-204ENST00000474612 TULP1O00294 542 aaPredicted RBP22.81■■□□□ 1.24
NOTCH4-204ENST00000474612 HSP90AB1P08238 724 aaKnown RBP22.81■■□□□ 1.24
NOTCH4-204ENST00000474612 FGD5Q6ZNL6 1462 aa22.79■■□□□ 1.24
NOTCH4-204ENST00000474612 NUTM2FA1L443 756 aa22.79■■□□□ 1.24
NOTCH4-204ENST00000474612 TPRNQ4KMQ1 711 aa22.76■■□□□ 1.23
NOTCH4-204ENST00000474612 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.76■■□□□ 1.23
NOTCH4-204ENST00000474612 NCAPD3P42695 1498 aa22.76■■□□□ 1.23
NOTCH4-204ENST00000474612 PTMAP06454 111 aaKnown RBP22.75■■□□□ 1.23
NOTCH4-204ENST00000474612 ISY1Q9ULR0 285 aaKnown RBP22.75■■□□□ 1.23
NOTCH4-204ENST00000474612 LTV1Q96GA3 475 aaPredicted RBP22.74■■□□□ 1.23
NOTCH4-204ENST00000474612 KIAA1211Q6ZU35 1233 aa22.73■■□□□ 1.23
NOTCH4-204ENST00000474612 AEBP2Q6ZN18 517 aaPredicted RBP22.72■■□□□ 1.23
NOTCH4-204ENST00000474612 IGF1RP08069 1367 aa22.72■■□□□ 1.23
NOTCH4-204ENST00000474612 EVC2Q86UK5 1308 aa22.72■■□□□ 1.23
NOTCH4-204ENST00000474612 TAF7LQ5H9L4 462 aa22.72■■□□□ 1.23
NOTCH4-204ENST00000474612 NLRP13Q86W25 1043 aa22.72■■□□□ 1.23
NOTCH4-204ENST00000474612 GOLGA6L4A6NEF3 574 aa22.71■■□□□ 1.23
NOTCH4-204ENST00000474612 ITPRIPQ8IWB1 547 aa22.71■■□□□ 1.23
NOTCH4-204ENST00000474612 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.71■■□□□ 1.23
NOTCH4-204ENST00000474612 GORABQ5T7V8 394 aa22.7■■□□□ 1.23
NOTCH4-204ENST00000474612 RWDD1Q9H446 243 aaPredicted RBP22.7■■□□□ 1.23
NOTCH4-204ENST00000474612 HSCBQ8IWL3 235 aa22.7■■□□□ 1.22
NOTCH4-204ENST00000474612 APBB1O00213 710 aa22.7■■□□□ 1.22
NOTCH4-204ENST00000474612 RAD54L2Q9Y4B4 1467 aa22.7■■□□□ 1.22
NOTCH4-204ENST00000474612 COG3Q96JB2 828 aa22.69■■□□□ 1.22
NOTCH4-204ENST00000474612 B4GALNT3Q6L9W6 998 aa22.68■■□□□ 1.22
NOTCH4-204ENST00000474612 RCAN3Q9UKA8 241 aa22.68■■□□□ 1.22
NOTCH4-204ENST00000474612 HMMRO75330 724 aa22.67■■□□□ 1.22
NOTCH4-204ENST00000474612 EVA1CP58658 441 aa22.67■■□□□ 1.22
NOTCH4-204ENST00000474612 CHMP3Q9Y3E7 222 aa22.67■■□□□ 1.22
NOTCH4-204ENST00000474612 PHLDB1Q86UU1 1377 aa22.66■■□□□ 1.22
NOTCH4-204ENST00000474612 SMC4Q9NTJ3 1288 aa22.66■■□□□ 1.22
NOTCH4-204ENST00000474612 GTF2E1P29083 439 aaPredicted RBP22.65■■□□□ 1.22
NOTCH4-204ENST00000474612 MYOM3Q5VTT5 1437 aa22.65■■□□□ 1.22
NOTCH4-204ENST00000474612 GOLGA6L6A8MZA4 724 aa22.65■■□□□ 1.22
NOTCH4-204ENST00000474612 GPATCH3Q96I76 525 aa22.65■■□□□ 1.22
NOTCH4-204ENST00000474612 AQRO60306 1485 aaKnown RBP eCLIP22.64■■□□□ 1.21
NOTCH4-204ENST00000474612 G3V3G9 751 aa22.63■■□□□ 1.21
NOTCH4-204ENST00000474612 DCAF8Q5TAQ9 597 aa22.63■■□□□ 1.21
NOTCH4-204ENST00000474612 CGNL1Q0VF96 1302 aa22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms