RNA–Protein interactions for RNA: ENST00000474584.5

RPGR-206, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

TSL 2

Gene RPGR, Length 2,268 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-206ENST00000474584 ARID3CA6NKF2 412 aa19.51■□□□□ 0.71
RPGR-206ENST00000474584 RAPGEF6Q8TEU7 1601 aa19.5■□□□□ 0.71
RPGR-206ENST00000474584 NCOA1Q15788 1441 aa19.5■□□□□ 0.71
RPGR-206ENST00000474584 KIAA0586Q9BVV6 1533 aa19.49■□□□□ 0.71
RPGR-206ENST00000474584 ANKRD30BQ9BXX2 1392 aa19.48■□□□□ 0.71
RPGR-206ENST00000474584 ABCC5O15440 1437 aa19.48■□□□□ 0.71
RPGR-206ENST00000474584 TEX14Q8IWB6 1497 aa19.48■□□□□ 0.71
RPGR-206ENST00000474584 IFT140Q96RY7 1462 aa19.48■□□□□ 0.71
RPGR-206ENST00000474584 DISP1Q96F81 1524 aa19.47■□□□□ 0.71
RPGR-206ENST00000474584 NUP153P49790 1475 aaKnown RBP19.47■□□□□ 0.71
RPGR-206ENST00000474584 FOXD1Q16676 465 aa19.47■□□□□ 0.71
RPGR-206ENST00000474584 CCDC7Q96M83 1385 aa19.47■□□□□ 0.71
RPGR-206ENST00000474584 ITSN2Q9NZM3 1697 aa19.45■□□□□ 0.7
RPGR-206ENST00000474584 CDK11AQ9UQ88 783 aaPredicted RBP19.45■□□□□ 0.7
RPGR-206ENST00000474584 RBM19Q9Y4C8 960 aaKnown RBP19.45■□□□□ 0.7
RPGR-206ENST00000474584 ADGBQ8N7X0 1667 aa19.44■□□□□ 0.7
RPGR-206ENST00000474584 ZNF608Q9ULD9 1512 aaPredicted RBP19.43■□□□□ 0.7
RPGR-206ENST00000474584 SLC4A1APQ9BWU0 796 aaKnown RBP19.41■□□□□ 0.7
RPGR-206ENST00000474584 PRKRIP1Q9H875 184 aaPredicted RBP19.41■□□□□ 0.7
RPGR-206ENST00000474584 GRIN2AQ12879 1464 aa19.4■□□□□ 0.7
RPGR-206ENST00000474584 CAMSAP2Q08AD1 1489 aa19.39■□□□□ 0.69
RPGR-206ENST00000474584 ZNF644Q9H582 1327 aaPredicted RBP19.39■□□□□ 0.69
RPGR-206ENST00000474584 C11orf95C9JLR9 678 aaPredicted RBP19.39■□□□□ 0.69
RPGR-206ENST00000474584 NBPF8Q3BBV2 869 aa19.39■□□□□ 0.69
RPGR-206ENST00000474584 EIF4G3O43432 1585 aaKnown RBP19.38■□□□□ 0.69
RPGR-206ENST00000474584 SPATA31E1Q6ZUB1 1445 aa19.38■□□□□ 0.69
RPGR-206ENST00000474584 CROCC2H7BZ55 1655 aa19.38■□□□□ 0.69
RPGR-206ENST00000474584 ERICH6BQ5W0A0 696 aa19.38■□□□□ 0.69
RPGR-206ENST00000474584 TROQ12816 1431 aaPredicted RBP19.38■□□□□ 0.69
RPGR-206ENST00000474584 ADCY10Q96PN6 1610 aa19.37■□□□□ 0.69
RPGR-206ENST00000474584 MRS2Q9HD23 443 aa19.36■□□□□ 0.69
RPGR-206ENST00000474584 PZPP20742 1482 aa19.35■□□□□ 0.69
RPGR-206ENST00000474584 CCDC184Q52MB2 194 aa19.35■□□□□ 0.69
RPGR-206ENST00000474584 KIF7Q2M1P5 1343 aa19.34■□□□□ 0.69
RPGR-206ENST00000474584 IRX6P78412 446 aaPredicted RBP19.34■□□□□ 0.69
RPGR-206ENST00000474584 ZBED9Q6R2W3 1325 aa19.33■□□□□ 0.68
RPGR-206ENST00000474584 PRG4Q92954 1404 aaPredicted RBP19.33■□□□□ 0.68
RPGR-206ENST00000474584 ADGRL2O95490 1459 aa19.32■□□□□ 0.68
RPGR-206ENST00000474584 FAM9BQ8IZU0 186 aa19.32■□□□□ 0.68
RPGR-206ENST00000474584 CFDP1Q9UEE9 299 aaPredicted RBP19.32■□□□□ 0.68
RPGR-206ENST00000474584 KIF14Q15058 1648 aa19.31■□□□□ 0.68
RPGR-206ENST00000474584 MBD5Q9P267 1494 aa19.31■□□□□ 0.68
RPGR-206ENST00000474584 GPATCH8Q9UKJ3 1502 aaKnown RBP19.3■□□□□ 0.68
RPGR-206ENST00000474584 KIAA1107Q9UPP5 1409 aa19.3■□□□□ 0.68
RPGR-206ENST00000474584 MAGI1Q96QZ7 1491 aaPredicted RBP19.29■□□□□ 0.68
RPGR-206ENST00000474584 PPP4R2Q9NY27 417 aa19.28■□□□□ 0.68
RPGR-206ENST00000474584 PLB1Q6P1J6 1458 aa19.27■□□□□ 0.68
RPGR-206ENST00000474584 CEP170Q5SW79 1584 aa19.27■□□□□ 0.68
RPGR-206ENST00000474584 ANKRD30AQ9BXX3 1397 aa19.26■□□□□ 0.67
RPGR-206ENST00000474584 USP47Q96K76 1375 aa19.24■□□□□ 0.67
RPGR-206ENST00000474584 SYNJ2O15056 1496 aa19.24■□□□□ 0.67
RPGR-206ENST00000474584 BCORL1Q5H9F3 1711 aa19.24■□□□□ 0.67
RPGR-206ENST00000474584 KDM5CP41229 1560 aa19.24■□□□□ 0.67
RPGR-206ENST00000474584 CARMIL2Q6F5E8 1435 aa19.23■□□□□ 0.67
RPGR-206ENST00000474584 ZNF777Q9ULD5 760 aaPredicted RBP19.23■□□□□ 0.67
RPGR-206ENST00000474584 CDC42BPAQ5VT25 1732 aa19.22■□□□□ 0.67
RPGR-206ENST00000474584 FANCIQ9NVI1 1328 aa19.22■□□□□ 0.67
RPGR-206ENST00000474584 ANKRD50Q9ULJ7 1429 aa19.22■□□□□ 0.67
RPGR-206ENST00000474584 CHMP7Q8WUX9 453 aaPredicted RBP19.21■□□□□ 0.67
RPGR-206ENST00000474584 ARID4BQ4LE39 1312 aaPredicted RBP19.2■□□□□ 0.66
RPGR-206ENST00000474584 SHANK2Q9UPX8 1470 aa19.2■□□□□ 0.66
RPGR-206ENST00000474584 PKD2Q13563 968 aa19.2■□□□□ 0.66
RPGR-206ENST00000474584 DHX29Q7Z478 1369 aaKnown RBP19.2■□□□□ 0.66
RPGR-206ENST00000474584 ZNF326Q5BKZ1 582 aaKnown RBP19.18■□□□□ 0.66
RPGR-206ENST00000474584 ARHGEF12Q9NZN5 1544 aa19.17■□□□□ 0.66
RPGR-206ENST00000474584 RALGAPBQ86X10 1494 aa19.17■□□□□ 0.66
RPGR-206ENST00000474584 UHRF1BP1Q6BDS2 1440 aa19.17■□□□□ 0.66
RPGR-206ENST00000474584 ROCK2O75116 1388 aaKnown RBP19.16■□□□□ 0.66
RPGR-206ENST00000474584 C9orf84Q5VXU9 1444 aa19.15■□□□□ 0.66
RPGR-206ENST00000474584 SMG6Q86US8 1419 aaKnown RBP19.15■□□□□ 0.66
RPGR-206ENST00000474584 KDM5DQ9BY66 1539 aa19.15■□□□□ 0.66
RPGR-206ENST00000474584 NUP160Q12769 1436 aa19.15■□□□□ 0.66
RPGR-206ENST00000474584 ERCC6Q03468 1493 aa19.14■□□□□ 0.65
RPGR-206ENST00000474584 POLR3GLQ9BT43 218 aa19.14■□□□□ 0.65
RPGR-206ENST00000474584 ABCA8O94911 1581 aa19.14■□□□□ 0.65
RPGR-206ENST00000474584 NUP155O75694 1391 aa19.13■□□□□ 0.65
RPGR-206ENST00000474584 MSH5O43196 834 aa19.13■□□□□ 0.65
RPGR-206ENST00000474584 ABCC10Q5T3U5 1492 aa19.13■□□□□ 0.65
RPGR-206ENST00000474584 PLEKHD1A6NEE1 506 aa19.12■□□□□ 0.65
RPGR-206ENST00000474584 JPH4Q96JJ6 628 aa19.12■□□□□ 0.65
RPGR-206ENST00000474584 FBLN2P98095 1184 aa19.11■□□□□ 0.65
RPGR-206ENST00000474584 B4GALNT3Q6L9W6 998 aa19.11■□□□□ 0.65
RPGR-206ENST00000474584 ERICH6Q7L0X2 663 aa19.09■□□□□ 0.65
RPGR-206ENST00000474584 ARHGEF5Q12774 1597 aa19.08■□□□□ 0.65
RPGR-206ENST00000474584 CARD11Q9BXL7 1154 aa19.08■□□□□ 0.64
RPGR-206ENST00000474584 NUDCQ9Y266 331 aa19.08■□□□□ 0.64
RPGR-206ENST00000474584 ATP10BO94823 1461 aa19.07■□□□□ 0.64
RPGR-206ENST00000474584 TSPY4P0CV99 314 aa19.07■□□□□ 0.64
RPGR-206ENST00000474584 TSPY10P0CW01 314 aa19.07■□□□□ 0.64
RPGR-206ENST00000474584 CNGB1Q14028 1251 aaPredicted RBP19.07■□□□□ 0.64
RPGR-206ENST00000474584 KIF15Q9NS87 1388 aa19.06■□□□□ 0.64
RPGR-206ENST00000474584 PTPRGP23470 1445 aa19.05■□□□□ 0.64
RPGR-206ENST00000474584 E9PCH4 1651 aa19.04■□□□□ 0.64
RPGR-206ENST00000474584 KTN1Q86UP2 1357 aaKnown RBP19.04■□□□□ 0.64
RPGR-206ENST00000474584 TMC1Q8TDI8 760 aa19.03■□□□□ 0.64
RPGR-206ENST00000474584 PNISRQ8TF01 805 aaKnown RBP19.02■□□□□ 0.63
RPGR-206ENST00000474584 RNF123Q5XPI4 1314 aa19.02■□□□□ 0.63
RPGR-206ENST00000474584 PREX2Q70Z35 1606 aa19■□□□□ 0.63
RPGR-206ENST00000474584 CCDC141Q6ZP82 1450 aa19■□□□□ 0.63
RPGR-206ENST00000474584 FAM135AQ9P2D6 1515 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms