RNA–Protein interactions for RNA: ENST00000474394.5

RNF220-210, Transcript of ring finger protein 220, humanhuman

TSL 3

Gene RNF220, Length 810 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-210ENST00000474394 NEO1Q92859 1461 aa17.16■□□□□ 0.34
RNF220-210ENST00000474394 TTC37Q6PGP7 1564 aa17.15■□□□□ 0.34
RNF220-210ENST00000474394 KIF14Q15058 1648 aa17.15■□□□□ 0.34
RNF220-210ENST00000474394 RIMS1Q86UR5 1692 aaKnown RBP17.13■□□□□ 0.33
RNF220-210ENST00000474394 PLCH2O75038 1416 aa17.12■□□□□ 0.33
RNF220-210ENST00000474394 FANCAO15360 1455 aa17.12■□□□□ 0.33
RNF220-210ENST00000474394 CFAP74Q9C0B2 1584 aa17.11■□□□□ 0.33
RNF220-210ENST00000474394 PLPPR3Q6T4P5 718 aa17.09■□□□□ 0.33
RNF220-210ENST00000474394 AKNAQ7Z591 1439 aa17.09■□□□□ 0.33
RNF220-210ENST00000474394 VPS8Q8N3P4 1428 aa17.09■□□□□ 0.33
RNF220-210ENST00000474394 SPATA31D1Q6ZQQ2 1576 aa17.09■□□□□ 0.33
RNF220-210ENST00000474394 MYO5CQ9NQX4 1742 aa17.08■□□□□ 0.32
RNF220-210ENST00000474394 EFCAB2Q5VUJ9 269 aa17.08■□□□□ 0.32
RNF220-210ENST00000474394 MTUS2Q5JR59 1369 aa17.07■□□□□ 0.32
RNF220-210ENST00000474394 DENND4BO75064 1496 aaPredicted RBP17.05■□□□□ 0.32
RNF220-210ENST00000474394 FRMPD1Q5SYB0 1578 aa17.04■□□□□ 0.32
RNF220-210ENST00000474394 ARHGAP5Q13017 1502 aa17.03■□□□□ 0.32
RNF220-210ENST00000474394 POGZQ7Z3K3 1410 aa17.01■□□□□ 0.31
RNF220-210ENST00000474394 SCAPERQ9BY12 1400 aa17.01■□□□□ 0.31
RNF220-210ENST00000474394 EHBP1L1Q8N3D4 1523 aa17.01■□□□□ 0.31
RNF220-210ENST00000474394 DMRT2Q9Y5R5 561 aa17■□□□□ 0.31
RNF220-210ENST00000474394 ARHGEF40Q8TER5 1519 aa17■□□□□ 0.31
RNF220-210ENST00000474394 PREX2Q70Z35 1606 aa16.99■□□□□ 0.31
RNF220-210ENST00000474394 CDC42BPBQ9Y5S2 1711 aa16.99■□□□□ 0.31
RNF220-210ENST00000474394 TIAM1Q13009 1591 aa16.98■□□□□ 0.31
RNF220-210ENST00000474394 CCNB3Q8WWL7 1395 aa16.98■□□□□ 0.31
RNF220-210ENST00000474394 RICTORQ6R327 1708 aa16.98■□□□□ 0.31
RNF220-210ENST00000474394 CDC42BPAQ5VT25 1732 aa16.97■□□□□ 0.31
RNF220-210ENST00000474394 YEATS2Q9ULM3 1422 aa16.96■□□□□ 0.31
RNF220-210ENST00000474394 GPATCH8Q9UKJ3 1502 aaKnown RBP16.96■□□□□ 0.3
RNF220-210ENST00000474394 APLP2Q06481 763 aa16.95■□□□□ 0.3
RNF220-210ENST00000474394 MAP3K1Q13233 1512 aa16.95■□□□□ 0.3
RNF220-210ENST00000474394 CFDP1Q9UEE9 299 aaPredicted RBP16.94■□□□□ 0.3
RNF220-210ENST00000474394 ZMYM4Q5VZL5 1548 aa16.94■□□□□ 0.3
RNF220-210ENST00000474394 STRCQ7RTU9 1775 aa16.94■□□□□ 0.3
RNF220-210ENST00000474394 FER1L4A9Z1Z3 1794 aa16.93■□□□□ 0.3
RNF220-210ENST00000474394 ZNF777Q9ULD5 760 aaPredicted RBP16.93■□□□□ 0.3
RNF220-210ENST00000474394 PREX1Q8TCU6 1659 aa16.93■□□□□ 0.3
RNF220-210ENST00000474394 MLECQ14165 292 aa16.92■□□□□ 0.3
RNF220-210ENST00000474394 ZNF518AQ6AHZ1 1483 aa16.92■□□□□ 0.3
RNF220-210ENST00000474394 LRRC9Q6ZRR7 1453 aa16.92■□□□□ 0.3
RNF220-210ENST00000474394 MAGI2Q86UL8 1455 aa16.92■□□□□ 0.3
RNF220-210ENST00000474394 SUPT6HQ7KZ85 1726 aaKnown RBP16.91■□□□□ 0.3
RNF220-210ENST00000474394 ABCC1P33527 1531 aa16.91■□□□□ 0.3
RNF220-210ENST00000474394 SIGLEC1Q9BZZ2 1709 aa16.9■□□□□ 0.3
RNF220-210ENST00000474394 NCOA2Q15596 1464 aa16.9■□□□□ 0.3
RNF220-210ENST00000474394 AFAP1Q8N556 730 aa16.89■□□□□ 0.29
RNF220-210ENST00000474394 ZFYVE16Q7Z3T8 1539 aa16.89■□□□□ 0.29
RNF220-210ENST00000474394 ITSN2Q9NZM3 1697 aa16.88■□□□□ 0.29
RNF220-210ENST00000474394 KANK4Q5T7N3 995 aaPredicted RBP16.88■□□□□ 0.29
RNF220-210ENST00000474394 SAMD9LQ8IVG5 1584 aa16.88■□□□□ 0.29
RNF220-210ENST00000474394 PLEKHH2Q8IVE3 1493 aa16.87■□□□□ 0.29
RNF220-210ENST00000474394 ARHGEF12Q9NZN5 1544 aa16.87■□□□□ 0.29
RNF220-210ENST00000474394 MYT1LQ9UL68 1186 aa16.87■□□□□ 0.29
RNF220-210ENST00000474394 TRAPPC8Q9Y2L5 1435 aa16.87■□□□□ 0.29
RNF220-210ENST00000474394 KDM5CP41229 1560 aa16.86■□□□□ 0.29
RNF220-210ENST00000474394 KIAA1107Q9UPP5 1409 aa16.86■□□□□ 0.29
RNF220-210ENST00000474394 SETD1BQ9UPS6 1966 aaKnown RBP16.85■□□□□ 0.29
RNF220-210ENST00000474394 CEBPAP49715 358 aaPredicted RBP16.84■□□□□ 0.29
RNF220-210ENST00000474394 HNRNPMP52272 730 aaKnown RBP eCLIP16.84■□□□□ 0.29
RNF220-210ENST00000474394 SYCP2Q9BX26 1530 aa16.84■□□□□ 0.29
RNF220-210ENST00000474394 PTPRTO14522 1441 aa16.83■□□□□ 0.28
RNF220-210ENST00000474394 ATP10AO60312 1499 aa16.82■□□□□ 0.28
RNF220-210ENST00000474394 MLH3Q9UHC1 1453 aa16.82■□□□□ 0.28
RNF220-210ENST00000474394 IQSEC2Q5JU85 1478 aa16.81■□□□□ 0.28
RNF220-210ENST00000474394 UHRF1BP1Q6BDS2 1440 aa16.81■□□□□ 0.28
RNF220-210ENST00000474394 ZNF644Q9H582 1327 aaPredicted RBP16.81■□□□□ 0.28
RNF220-210ENST00000474394 C9orf84Q5VXU9 1444 aa16.8■□□□□ 0.28
RNF220-210ENST00000474394 LTBP4Q8N2S1 1624 aa16.8■□□□□ 0.28
RNF220-210ENST00000474394 SPAG9O60271 1321 aaKnown RBP16.79■□□□□ 0.28
RNF220-210ENST00000474394 CAMSAP2Q08AD1 1489 aa16.77■□□□□ 0.28
RNF220-210ENST00000474394 MYOM3Q5VTT5 1437 aa16.77■□□□□ 0.27
RNF220-210ENST00000474394 DIP2CQ9Y2E4 1556 aa16.77■□□□□ 0.27
RNF220-210ENST00000474394 MBD5Q9P267 1494 aa16.76■□□□□ 0.27
RNF220-210ENST00000474394 RSPH4AQ5TD94 716 aa16.76■□□□□ 0.27
RNF220-210ENST00000474394 KIDINS220Q9ULH0 1771 aa16.76■□□□□ 0.27
RNF220-210ENST00000474394 ABCA6Q8N139 1617 aa16.75■□□□□ 0.27
RNF220-210ENST00000474394 MIA2Q96PC5 1412 aa16.75■□□□□ 0.27
RNF220-210ENST00000474394 REREQ9P2R6 1566 aa16.73■□□□□ 0.27
RNF220-210ENST00000474394 ATP7AQ04656 1500 aa16.73■□□□□ 0.27
RNF220-210ENST00000474394 CCDC141Q6ZP82 1450 aa16.73■□□□□ 0.27
RNF220-210ENST00000474394 INO80Q9ULG1 1556 aaPredicted RBP16.71■□□□□ 0.27
RNF220-210ENST00000474394 ARHGEF5Q12774 1597 aa16.7■□□□□ 0.26
RNF220-210ENST00000474394 UBAP1LF5GYI3 381 aa16.7■□□□□ 0.26
RNF220-210ENST00000474394 RTEL1-TNFRSF6BF6WH68 1400 aa16.7■□□□□ 0.26
RNF220-210ENST00000474394 TSPY4P0CV99 314 aa16.69■□□□□ 0.26
RNF220-210ENST00000474394 TSPY10P0CW01 314 aa16.69■□□□□ 0.26
RNF220-210ENST00000474394 AGLP35573 1532 aa16.69■□□□□ 0.26
RNF220-210ENST00000474394 FGD6Q6ZV73 1430 aa16.66■□□□□ 0.26
RNF220-210ENST00000474394 A2MP01023 1474 aa16.66■□□□□ 0.26
RNF220-210ENST00000474394 C3P01024 1663 aa16.65■□□□□ 0.26
RNF220-210ENST00000474394 NCOA1Q15788 1441 aa16.65■□□□□ 0.26
RNF220-210ENST00000474394 PTPN23Q9H3S7 1636 aa16.65■□□□□ 0.26
RNF220-210ENST00000474394 ADGBQ8N7X0 1667 aa16.64■□□□□ 0.25
RNF220-210ENST00000474394 TCOF1Q13428 1488 aaKnown RBP16.62■□□□□ 0.25
RNF220-210ENST00000474394 ESF1Q9H501 851 aaKnown RBP16.62■□□□□ 0.25
RNF220-210ENST00000474394 PLXNC1O60486 1568 aa16.62■□□□□ 0.25
RNF220-210ENST00000474394 DHX29Q7Z478 1369 aaKnown RBP16.62■□□□□ 0.25
RNF220-210ENST00000474394 MED1Q15648 1581 aaPredicted RBP16.6■□□□□ 0.25
RNF220-210ENST00000474394 MAST1Q9Y2H9 1570 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms