RNA–Protein interactions for RNA: ENST00000474000.5

COL16A1-210, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 676 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-210ENST00000474000 CFAP74Q9C0B2 1584 aa19.71■□□□□ 0.75
COL16A1-210ENST00000474000 EFCAB2Q5VUJ9 269 aa19.71■□□□□ 0.75
COL16A1-210ENST00000474000 POGZQ7Z3K3 1410 aa19.7■□□□□ 0.74
COL16A1-210ENST00000474000 SCAPERQ9BY12 1400 aa19.69■□□□□ 0.74
COL16A1-210ENST00000474000 SIGLEC1Q9BZZ2 1709 aa19.69■□□□□ 0.74
COL16A1-210ENST00000474000 ZMYM4Q5VZL5 1548 aa19.69■□□□□ 0.74
COL16A1-210ENST00000474000 ZFYVE16Q7Z3T8 1539 aa19.69■□□□□ 0.74
COL16A1-210ENST00000474000 MAGI2Q86UL8 1455 aa19.67■□□□□ 0.74
COL16A1-210ENST00000474000 HECW1Q76N89 1606 aa19.67■□□□□ 0.74
COL16A1-210ENST00000474000 TROQ12816 1431 aaPredicted RBP19.63■□□□□ 0.73
COL16A1-210ENST00000474000 ATP10AO60312 1499 aa19.6■□□□□ 0.73
COL16A1-210ENST00000474000 CLIP1P30622 1438 aa19.6■□□□□ 0.73
COL16A1-210ENST00000474000 AFAP1Q8N556 730 aa19.6■□□□□ 0.73
COL16A1-210ENST00000474000 CEBPAP49715 358 aaPredicted RBP19.59■□□□□ 0.73
COL16A1-210ENST00000474000 CERKQ8TCT0 537 aa19.57■□□□□ 0.72
COL16A1-210ENST00000474000 C9orf84Q5VXU9 1444 aa19.57■□□□□ 0.72
COL16A1-210ENST00000474000 CASKIN1Q8WXD9 1431 aa19.57■□□□□ 0.72
COL16A1-210ENST00000474000 FER1L4A9Z1Z3 1794 aa19.57■□□□□ 0.72
COL16A1-210ENST00000474000 ARHGEF12Q9NZN5 1544 aa19.56■□□□□ 0.72
COL16A1-210ENST00000474000 KIF14Q15058 1648 aa19.55■□□□□ 0.72
COL16A1-210ENST00000474000 MYT1LQ9UL68 1186 aa19.55■□□□□ 0.72
COL16A1-210ENST00000474000 ARHGAP5Q13017 1502 aa19.54■□□□□ 0.72
COL16A1-210ENST00000474000 MYO5CQ9NQX4 1742 aa19.53■□□□□ 0.72
COL16A1-210ENST00000474000 ZNF518AQ6AHZ1 1483 aa19.51■□□□□ 0.71
COL16A1-210ENST00000474000 CCDC18Q5T9S5 1454 aa19.5■□□□□ 0.71
COL16A1-210ENST00000474000 KDM5CP41229 1560 aa19.46■□□□□ 0.71
COL16A1-210ENST00000474000 PREX1Q8TCU6 1659 aa19.45■□□□□ 0.7
COL16A1-210ENST00000474000 LRRIQ1Q96JM4 1722 aa19.45■□□□□ 0.7
COL16A1-210ENST00000474000 TRAPPC8Q9Y2L5 1435 aa19.44■□□□□ 0.7
COL16A1-210ENST00000474000 FYCO1Q9BQS8 1478 aa19.44■□□□□ 0.7
COL16A1-210ENST00000474000 ZNF777Q9ULD5 760 aaPredicted RBP19.44■□□□□ 0.7
COL16A1-210ENST00000474000 DMRT2Q9Y5R5 561 aa19.43■□□□□ 0.7
COL16A1-210ENST00000474000 DIP2CQ9Y2E4 1556 aa19.43■□□□□ 0.7
COL16A1-210ENST00000474000 MLH3Q9UHC1 1453 aa19.42■□□□□ 0.7
COL16A1-210ENST00000474000 CDC42BPBQ9Y5S2 1711 aa19.42■□□□□ 0.7
COL16A1-210ENST00000474000 UHRF1BP1Q6BDS2 1440 aa19.42■□□□□ 0.7
COL16A1-210ENST00000474000 STRCQ7RTU9 1775 aa19.39■□□□□ 0.7
COL16A1-210ENST00000474000 ESF1Q9H501 851 aaKnown RBP19.39■□□□□ 0.69
COL16A1-210ENST00000474000 HNRNPMP52272 730 aaKnown RBP eCLIP19.38■□□□□ 0.69
COL16A1-210ENST00000474000 ABCA6Q8N139 1617 aa19.38■□□□□ 0.69
COL16A1-210ENST00000474000 REREQ9P2R6 1566 aa19.38■□□□□ 0.69
COL16A1-210ENST00000474000 SETD1BQ9UPS6 1966 aaKnown RBP19.38■□□□□ 0.69
COL16A1-210ENST00000474000 GPATCH8Q9UKJ3 1502 aaKnown RBP19.37■□□□□ 0.69
COL16A1-210ENST00000474000 CFDP1Q9UEE9 299 aaPredicted RBP19.37■□□□□ 0.69
COL16A1-210ENST00000474000 ABCC1P33527 1531 aa19.36■□□□□ 0.69
COL16A1-210ENST00000474000 PREX2Q70Z35 1606 aa19.36■□□□□ 0.69
COL16A1-210ENST00000474000 AGLP35573 1532 aa19.35■□□□□ 0.69
COL16A1-210ENST00000474000 C3P01024 1663 aa19.34■□□□□ 0.69
COL16A1-210ENST00000474000 SPAG9O60271 1321 aaKnown RBP19.34■□□□□ 0.69
COL16A1-210ENST00000474000 MTUS2Q5JR59 1369 aa19.33■□□□□ 0.69
COL16A1-210ENST00000474000 CCNB3Q8WWL7 1395 aa19.33■□□□□ 0.69
COL16A1-210ENST00000474000 ITSN2Q9NZM3 1697 aa19.31■□□□□ 0.68
COL16A1-210ENST00000474000 PTPRTO14522 1441 aa19.31■□□□□ 0.68
COL16A1-210ENST00000474000 KIDINS220Q9ULH0 1771 aa19.31■□□□□ 0.68
COL16A1-210ENST00000474000 KIAA1107Q9UPP5 1409 aa19.29■□□□□ 0.68
COL16A1-210ENST00000474000 CDC42BPAQ5VT25 1732 aa19.28■□□□□ 0.68
COL16A1-210ENST00000474000 ZNF644Q9H582 1327 aaPredicted RBP19.27■□□□□ 0.68
COL16A1-210ENST00000474000 CNTLNQ9NXG0 1405 aa19.27■□□□□ 0.68
COL16A1-210ENST00000474000 DISP3Q9P2K9 1392 aa19.27■□□□□ 0.68
COL16A1-210ENST00000474000 SAMD9LQ8IVG5 1584 aa19.27■□□□□ 0.67
COL16A1-210ENST00000474000 SYCP2Q9BX26 1530 aa19.26■□□□□ 0.67
COL16A1-210ENST00000474000 ILDR2Q71H61 639 aa19.26■□□□□ 0.67
COL16A1-210ENST00000474000 CEP162Q5TB80 1403 aa19.25■□□□□ 0.67
COL16A1-210ENST00000474000 PLEKHH2Q8IVE3 1493 aa19.25■□□□□ 0.67
COL16A1-210ENST00000474000 ZMYM3Q14202 1370 aa19.25■□□□□ 0.67
COL16A1-210ENST00000474000 NCOA1Q15788 1441 aa19.24■□□□□ 0.67
COL16A1-210ENST00000474000 LTBP4Q8N2S1 1624 aa19.22■□□□□ 0.67
COL16A1-210ENST00000474000 NCKAP5LQ9HCH0 1330 aa19.21■□□□□ 0.67
COL16A1-210ENST00000474000 NPATQ14207 1427 aa19.2■□□□□ 0.66
COL16A1-210ENST00000474000 LOC105371045A0A1W2PR82 267 aa19.2■□□□□ 0.66
COL16A1-210ENST00000474000 GGT6Q6P531 493 aa19.2■□□□□ 0.66
COL16A1-210ENST00000474000 CAMSAP1Q5T5Y3 1602 aa19.18■□□□□ 0.66
COL16A1-210ENST00000474000 A2MP01023 1474 aa19.18■□□□□ 0.66
COL16A1-210ENST00000474000 SUPT6HQ7KZ85 1726 aaKnown RBP19.18■□□□□ 0.66
COL16A1-210ENST00000474000 ATP7AQ04656 1500 aa19.18■□□□□ 0.66
COL16A1-210ENST00000474000 MBD5Q9P267 1494 aa19.17■□□□□ 0.66
COL16A1-210ENST00000474000 MROH2AA6NES4 1674 aa19.16■□□□□ 0.66
COL16A1-210ENST00000474000 EHBP1L1Q8N3D4 1523 aa19.15■□□□□ 0.66
COL16A1-210ENST00000474000 PPP6R1Q9UPN7 881 aa19.15■□□□□ 0.66
COL16A1-210ENST00000474000 SOCS7O14512 581 aa19.14■□□□□ 0.65
COL16A1-210ENST00000474000 ZNF335Q9H4Z2 1342 aaPredicted RBP19.14■□□□□ 0.65
COL16A1-210ENST00000474000 TIAM1Q13009 1591 aa19.14■□□□□ 0.65
COL16A1-210ENST00000474000 RSPH4AQ5TD94 716 aa19.13■□□□□ 0.65
COL16A1-210ENST00000474000 IQSEC2Q5JU85 1478 aa19.13■□□□□ 0.65
COL16A1-210ENST00000474000 CLTCQ00610 1675 aaKnown RBP19.13■□□□□ 0.65
COL16A1-210ENST00000474000 PLXNC1O60486 1568 aa19.12■□□□□ 0.65
COL16A1-210ENST00000474000 RTEL1-TNFRSF6BF6WH68 1400 aa19.12■□□□□ 0.65
COL16A1-210ENST00000474000 PTPRKQ15262 1439 aa19.12■□□□□ 0.65
COL16A1-210ENST00000474000 INO80Q9ULG1 1556 aaPredicted RBP19.11■□□□□ 0.65
COL16A1-210ENST00000474000 NCOA2Q15596 1464 aa19.11■□□□□ 0.65
COL16A1-210ENST00000474000 DHX29Q7Z478 1369 aaKnown RBP19.11■□□□□ 0.65
COL16A1-210ENST00000474000 PKD2Q13563 968 aa19.1■□□□□ 0.65
COL16A1-210ENST00000474000 KIF3BO15066 747 aa19.08■□□□□ 0.64
COL16A1-210ENST00000474000 UBAP1LF5GYI3 381 aa19.07■□□□□ 0.64
COL16A1-210ENST00000474000 PLA2R1Q13018 1463 aa19.07■□□□□ 0.64
COL16A1-210ENST00000474000 MYO3AQ8NEV4 1616 aa19.07■□□□□ 0.64
COL16A1-210ENST00000474000 SPATA31D1Q6ZQQ2 1576 aa19.06■□□□□ 0.64
COL16A1-210ENST00000474000 TSPY4P0CV99 314 aa19.06■□□□□ 0.64
COL16A1-210ENST00000474000 TSPY10P0CW01 314 aa19.06■□□□□ 0.64
COL16A1-210ENST00000474000 VPS8Q8N3P4 1428 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms