RNA–Protein interactions for RNA: ENST00000473879.1

BRAT1-205, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-205ENST00000473879 PREX2Q70Z35 1606 aa20.84■□□□□ 0.93
BRAT1-205ENST00000473879 EFCAB2Q5VUJ9 269 aa20.83■□□□□ 0.93
BRAT1-205ENST00000473879 CDC42BPAQ5VT25 1732 aa20.81■□□□□ 0.92
BRAT1-205ENST00000473879 CDC42BPBQ9Y5S2 1711 aa20.81■□□□□ 0.92
BRAT1-205ENST00000473879 ADGRL1O94910 1474 aa20.8■□□□□ 0.92
BRAT1-205ENST00000473879 LRRC9Q6ZRR7 1453 aa20.79■□□□□ 0.92
BRAT1-205ENST00000473879 ZMYM4Q5VZL5 1548 aa20.78■□□□□ 0.92
BRAT1-205ENST00000473879 ARHGEF40Q8TER5 1519 aa20.78■□□□□ 0.92
BRAT1-205ENST00000473879 SCAPERQ9BY12 1400 aa20.78■□□□□ 0.92
BRAT1-205ENST00000473879 ARHGAP5Q13017 1502 aa20.77■□□□□ 0.92
BRAT1-205ENST00000473879 GPATCH8Q9UKJ3 1502 aaKnown RBP20.75■□□□□ 0.91
BRAT1-205ENST00000473879 MTUS2Q5JR59 1369 aa20.74■□□□□ 0.91
BRAT1-205ENST00000473879 POGZQ7Z3K3 1410 aa20.74■□□□□ 0.91
BRAT1-205ENST00000473879 SUPT6HQ7KZ85 1726 aaKnown RBP20.73■□□□□ 0.91
BRAT1-205ENST00000473879 MAGI2Q86UL8 1455 aa20.72■□□□□ 0.91
BRAT1-205ENST00000473879 NCOA2Q15596 1464 aa20.71■□□□□ 0.91
BRAT1-205ENST00000473879 ABCC1P33527 1531 aa20.7■□□□□ 0.9
BRAT1-205ENST00000473879 ITSN2Q9NZM3 1697 aa20.69■□□□□ 0.9
BRAT1-205ENST00000473879 ZFYVE16Q7Z3T8 1539 aa20.68■□□□□ 0.9
BRAT1-205ENST00000473879 KDM5CP41229 1560 aa20.68■□□□□ 0.9
BRAT1-205ENST00000473879 SAMD9LQ8IVG5 1584 aa20.68■□□□□ 0.9
BRAT1-205ENST00000473879 ZNF518AQ6AHZ1 1483 aa20.67■□□□□ 0.9
BRAT1-205ENST00000473879 YEATS2Q9ULM3 1422 aa20.65■□□□□ 0.9
BRAT1-205ENST00000473879 CCNB3Q8WWL7 1395 aa20.65■□□□□ 0.9
BRAT1-205ENST00000473879 KANK4Q5T7N3 995 aaPredicted RBP20.65■□□□□ 0.9
BRAT1-205ENST00000473879 BCORL1Q5H9F3 1711 aa20.64■□□□□ 0.9
BRAT1-205ENST00000473879 ARHGEF12Q9NZN5 1544 aa20.64■□□□□ 0.9
BRAT1-205ENST00000473879 APLP2Q06481 763 aa20.64■□□□□ 0.89
BRAT1-205ENST00000473879 AFAP1Q8N556 730 aa20.64■□□□□ 0.89
BRAT1-205ENST00000473879 SIGLEC1Q9BZZ2 1709 aa20.64■□□□□ 0.89
BRAT1-205ENST00000473879 HECW2Q9P2P5 1572 aa20.63■□□□□ 0.89
BRAT1-205ENST00000473879 ADAMTSL3P82987 1691 aa20.63■□□□□ 0.89
BRAT1-205ENST00000473879 CFDP1Q9UEE9 299 aaPredicted RBP20.62■□□□□ 0.89
BRAT1-205ENST00000473879 ARID4BQ4LE39 1312 aaPredicted RBP20.61■□□□□ 0.89
BRAT1-205ENST00000473879 KIAA1107Q9UPP5 1409 aa20.61■□□□□ 0.89
BRAT1-205ENST00000473879 ZNF777Q9ULD5 760 aaPredicted RBP20.6■□□□□ 0.89
BRAT1-205ENST00000473879 TRAPPC8Q9Y2L5 1435 aa20.6■□□□□ 0.89
BRAT1-205ENST00000473879 ATP10AO60312 1499 aa20.58■□□□□ 0.89
BRAT1-205ENST00000473879 MLH3Q9UHC1 1453 aa20.58■□□□□ 0.89
BRAT1-205ENST00000473879 SYCP2Q9BX26 1530 aa20.58■□□□□ 0.88
BRAT1-205ENST00000473879 PLEKHH2Q8IVE3 1493 aa20.57■□□□□ 0.88
BRAT1-205ENST00000473879 MBD5Q9P267 1494 aa20.56■□□□□ 0.88
BRAT1-205ENST00000473879 MADDQ8WXG6 1647 aa20.56■□□□□ 0.88
BRAT1-205ENST00000473879 DIP2CQ9Y2E4 1556 aa20.55■□□□□ 0.88
BRAT1-205ENST00000473879 MYOM3Q5VTT5 1437 aa20.55■□□□□ 0.88
BRAT1-205ENST00000473879 C9orf84Q5VXU9 1444 aa20.55■□□□□ 0.88
BRAT1-205ENST00000473879 ABCA6Q8N139 1617 aa20.55■□□□□ 0.88
BRAT1-205ENST00000473879 MIA2Q96PC5 1412 aa20.54■□□□□ 0.88
BRAT1-205ENST00000473879 HNRNPMP52272 730 aaKnown RBP eCLIP20.54■□□□□ 0.88
BRAT1-205ENST00000473879 MYT1LQ9UL68 1186 aa20.54■□□□□ 0.88
BRAT1-205ENST00000473879 REREQ9P2R6 1566 aa20.53■□□□□ 0.88
BRAT1-205ENST00000473879 KIDINS220Q9ULH0 1771 aa20.53■□□□□ 0.88
BRAT1-205ENST00000473879 CAMSAP2Q08AD1 1489 aa20.52■□□□□ 0.88
BRAT1-205ENST00000473879 ARHGEF5Q12774 1597 aa20.51■□□□□ 0.87
BRAT1-205ENST00000473879 INO80Q9ULG1 1556 aaPredicted RBP20.51■□□□□ 0.87
BRAT1-205ENST00000473879 RIMS1Q86UR5 1692 aaKnown RBP20.5■□□□□ 0.87
BRAT1-205ENST00000473879 ZNF644Q9H582 1327 aaPredicted RBP20.5■□□□□ 0.87
BRAT1-205ENST00000473879 PTPRMP28827 1452 aa20.5■□□□□ 0.87
BRAT1-205ENST00000473879 FER1L4A9Z1Z3 1794 aa20.49■□□□□ 0.87
BRAT1-205ENST00000473879 TCOF1Q13428 1488 aaKnown RBP20.48■□□□□ 0.87
BRAT1-205ENST00000473879 SPAG9O60271 1321 aaKnown RBP20.48■□□□□ 0.87
BRAT1-205ENST00000473879 FGD6Q6ZV73 1430 aa20.45■□□□□ 0.86
BRAT1-205ENST00000473879 ATP7AQ04656 1500 aa20.45■□□□□ 0.86
BRAT1-205ENST00000473879 MLECQ14165 292 aa20.45■□□□□ 0.86
BRAT1-205ENST00000473879 AGLP35573 1532 aa20.43■□□□□ 0.86
BRAT1-205ENST00000473879 PTPN23Q9H3S7 1636 aa20.43■□□□□ 0.86
BRAT1-205ENST00000473879 CCDC141Q6ZP82 1450 aa20.43■□□□□ 0.86
BRAT1-205ENST00000473879 RSPH4AQ5TD94 716 aa20.42■□□□□ 0.86
BRAT1-205ENST00000473879 MAST1Q9Y2H9 1570 aa20.42■□□□□ 0.86
BRAT1-205ENST00000473879 PLXNC1O60486 1568 aa20.41■□□□□ 0.86
BRAT1-205ENST00000473879 RTEL1-TNFRSF6BF6WH68 1400 aa20.4■□□□□ 0.86
BRAT1-205ENST00000473879 PPARGC1BQ86YN6 1023 aaKnown RBP20.4■□□□□ 0.86
BRAT1-205ENST00000473879 CROCC2H7BZ55 1655 aa20.39■□□□□ 0.86
BRAT1-205ENST00000473879 ADGBQ8N7X0 1667 aa20.38■□□□□ 0.85
BRAT1-205ENST00000473879 DNMT1P26358 1616 aaKnown RBP20.37■□□□□ 0.85
BRAT1-205ENST00000473879 SHANK2Q9UPX8 1470 aa20.37■□□□□ 0.85
BRAT1-205ENST00000473879 A2MP01023 1474 aa20.35■□□□□ 0.85
BRAT1-205ENST00000473879 ABCC5O15440 1437 aa20.31■□□□□ 0.84
BRAT1-205ENST00000473879 TSPY4P0CV99 314 aa20.31■□□□□ 0.84
BRAT1-205ENST00000473879 TSPY10P0CW01 314 aa20.31■□□□□ 0.84
BRAT1-205ENST00000473879 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.31■□□□□ 0.84
BRAT1-205ENST00000473879 RRBP1Q9P2E9 1410 aaKnown RBP20.29■□□□□ 0.84
BRAT1-205ENST00000473879 DAPK1P53355 1430 aa20.28■□□□□ 0.84
BRAT1-205ENST00000473879 PLPPR3Q6T4P5 718 aa20.28■□□□□ 0.84
BRAT1-205ENST00000473879 ESF1Q9H501 851 aaKnown RBP20.28■□□□□ 0.84
BRAT1-205ENST00000473879 DHX29Q7Z478 1369 aaKnown RBP20.28■□□□□ 0.84
BRAT1-205ENST00000473879 C3P01024 1663 aa20.27■□□□□ 0.84
BRAT1-205ENST00000473879 CNTLNQ9NXG0 1405 aa20.27■□□□□ 0.83
BRAT1-205ENST00000473879 MROH2AA6NES4 1674 aa20.26■□□□□ 0.83
BRAT1-205ENST00000473879 TRIM26Q12899 539 aaPredicted RBP20.26■□□□□ 0.83
BRAT1-205ENST00000473879 ADGRL2O95490 1459 aa20.25■□□□□ 0.83
BRAT1-205ENST00000473879 LMTK3Q96Q04 1460 aa20.25■□□□□ 0.83
BRAT1-205ENST00000473879 CEBPAP49715 358 aaPredicted RBP20.25■□□□□ 0.83
BRAT1-205ENST00000473879 PREX1Q8TCU6 1659 aa20.24■□□□□ 0.83
BRAT1-205ENST00000473879 PPP6R1Q9UPN7 881 aa20.24■□□□□ 0.83
BRAT1-205ENST00000473879 GGT6Q6P531 493 aa20.22■□□□□ 0.83
BRAT1-205ENST00000473879 EIF2AK4Q9P2K8 1649 aaKnown RBP20.21■□□□□ 0.83
BRAT1-205ENST00000473879 CLTCQ00610 1675 aaKnown RBP20.21■□□□□ 0.83
BRAT1-205ENST00000473879 PTPRKQ15262 1439 aa20.2■□□□□ 0.82
BRAT1-205ENST00000473879 RNF17Q9BXT8 1623 aaKnown RBP20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 6.6 ms