RNA–Protein interactions for RNA: ENST00000473711.1

SP140-208, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 644 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-208ENST00000473711 RRBP1Q9P2E9 1410 aaKnown RBP16.31■□□□□ 0.2
SP140-208ENST00000473711 CCNB3Q8WWL7 1395 aa16.3■□□□□ 0.2
SP140-208ENST00000473711 FAM50AQ14320 339 aaKnown RBP16.29■□□□□ 0.2
SP140-208ENST00000473711 CYB5RLQ6IPT4 315 aa16.29■□□□□ 0.2
SP140-208ENST00000473711 KDM5BQ9UGL1 1544 aa16.28■□□□□ 0.2
SP140-208ENST00000473711 ADCY10Q96PN6 1610 aa16.27■□□□□ 0.2
SP140-208ENST00000473711 NPM1P06748 294 aaKnown RBP eCLIP16.27■□□□□ 0.2
SP140-208ENST00000473711 MYOM3Q5VTT5 1437 aa16.27■□□□□ 0.19
SP140-208ENST00000473711 KCNH8Q96L42 1107 aa16.26■□□□□ 0.19
SP140-208ENST00000473711 ITGAEP38570 1179 aa16.25■□□□□ 0.19
SP140-208ENST00000473711 ZCCHC11Q5TAX3 1644 aaKnown RBP16.25■□□□□ 0.19
SP140-208ENST00000473711 FGD6Q6ZV73 1430 aa16.24■□□□□ 0.19
SP140-208ENST00000473711 TRHP20396 242 aaPredicted RBP16.23■□□□□ 0.19
SP140-208ENST00000473711 SAMD1Q6SPF0 538 aaPredicted RBP16.22■□□□□ 0.19
SP140-208ENST00000473711 KIF14Q15058 1648 aa16.22■□□□□ 0.19
SP140-208ENST00000473711 CFDP1Q9UEE9 299 aaPredicted RBP16.19■□□□□ 0.18
SP140-208ENST00000473711 ABCC10Q5T3U5 1492 aa16.18■□□□□ 0.18
SP140-208ENST00000473711 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.18■□□□□ 0.18
SP140-208ENST00000473711 DSG3P32926 999 aa16.18■□□□□ 0.18
SP140-208ENST00000473711 GPATCH8Q9UKJ3 1502 aaKnown RBP16.18■□□□□ 0.18
SP140-208ENST00000473711 MIA2Q96PC5 1412 aa16.18■□□□□ 0.18
SP140-208ENST00000473711 ZNF777Q9ULD5 760 aaPredicted RBP16.17■□□□□ 0.18
SP140-208ENST00000473711 MYCNP04198 464 aaPredicted RBP16.16■□□□□ 0.18
SP140-208ENST00000473711 ASXL2Q76L83 1435 aa16.16■□□□□ 0.18
SP140-208ENST00000473711 ZNF644Q9H582 1327 aaPredicted RBP16.16■□□□□ 0.18
SP140-208ENST00000473711 PTPN23Q9H3S7 1636 aa16.16■□□□□ 0.18
SP140-208ENST00000473711 TCOF1Q13428 1488 aaKnown RBP16.14■□□□□ 0.17
SP140-208ENST00000473711 WDR7Q9Y4E6 1490 aa16.14■□□□□ 0.17
SP140-208ENST00000473711 ZNF219Q9P2Y4 722 aaPredicted RBP16.13■□□□□ 0.17
SP140-208ENST00000473711 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.13■□□□□ 0.17
SP140-208ENST00000473711 FOXD4L1Q9NU39 408 aa16.1■□□□□ 0.17
SP140-208ENST00000473711 ITSN2Q9NZM3 1697 aa16.09■□□□□ 0.17
SP140-208ENST00000473711 TTC37Q6PGP7 1564 aa16.09■□□□□ 0.17
SP140-208ENST00000473711 CDC42BPAQ5VT25 1732 aa16.08■□□□□ 0.17
SP140-208ENST00000473711 PTPRKQ15262 1439 aa16.08■□□□□ 0.16
SP140-208ENST00000473711 CHIC2Q9UKJ5 165 aa16.07■□□□□ 0.16
SP140-208ENST00000473711 CAMSAP2Q08AD1 1489 aa16.06■□□□□ 0.16
SP140-208ENST00000473711 PLCH2O75038 1416 aa16.06■□□□□ 0.16
SP140-208ENST00000473711 HNRNPMP52272 730 aaKnown RBP eCLIP16.05■□□□□ 0.16
SP140-208ENST00000473711 EFCAB2Q5VUJ9 269 aa16.05■□□□□ 0.16
SP140-208ENST00000473711 ARHGAP5Q13017 1502 aa16.04■□□□□ 0.16
SP140-208ENST00000473711 CDC42BPBQ9Y5S2 1711 aa16.03■□□□□ 0.16
SP140-208ENST00000473711 PREX2Q70Z35 1606 aa16.03■□□□□ 0.16
SP140-208ENST00000473711 ABCC5O15440 1437 aa16.02■□□□□ 0.16
SP140-208ENST00000473711 DAPK1P53355 1430 aa16.02■□□□□ 0.15
SP140-208ENST00000473711 SETD5Q9C0A6 1442 aa16.02■□□□□ 0.15
SP140-208ENST00000473711 RRP7BPQ9NSQ0 103 aa16.01■□□□□ 0.15
SP140-208ENST00000473711 MYO5CQ9NQX4 1742 aa16.01■□□□□ 0.15
SP140-208ENST00000473711 MAPKBP1O60336 1514 aa16■□□□□ 0.15
SP140-208ENST00000473711 CCER1Q8TC90 406 aaPredicted RBP16■□□□□ 0.15
SP140-208ENST00000473711 ABCA9Q8IUA7 1624 aa15.99■□□□□ 0.15
SP140-208ENST00000473711 ILDR1Q86SU0 546 aaPredicted RBP15.99■□□□□ 0.15
SP140-208ENST00000473711 DNMT1P26358 1616 aaKnown RBP15.98■□□□□ 0.15
SP140-208ENST00000473711 SAMD9LQ8IVG5 1584 aa15.98■□□□□ 0.15
SP140-208ENST00000473711 RAB3GAP2Q9H2M9 1393 aa15.98■□□□□ 0.15
SP140-208ENST00000473711 CD109Q6YHK3 1445 aa15.97■□□□□ 0.15
SP140-208ENST00000473711 TSPY4P0CV99 314 aa15.97■□□□□ 0.15
SP140-208ENST00000473711 TSPY10P0CW01 314 aa15.97■□□□□ 0.15
SP140-208ENST00000473711 RSPH4AQ5TD94 716 aa15.97■□□□□ 0.15
SP140-208ENST00000473711 ABCB7O75027 752 aa15.96■□□□□ 0.15
SP140-208ENST00000473711 FAM69CQ0P6D2 419 aa15.96■□□□□ 0.15
SP140-208ENST00000473711 MBD5Q9P267 1494 aa15.96■□□□□ 0.14
SP140-208ENST00000473711 AKNAQ7Z591 1439 aa15.95■□□□□ 0.14
SP140-208ENST00000473711 PLEKHH2Q8IVE3 1493 aa15.95■□□□□ 0.14
SP140-208ENST00000473711 KIAA1107Q9UPP5 1409 aa15.94■□□□□ 0.14
SP140-208ENST00000473711 ARAP3Q8WWN8 1544 aa15.94■□□□□ 0.14
SP140-208ENST00000473711 HFM1A2PYH4 1435 aa15.94■□□□□ 0.14
SP140-208ENST00000473711 NAIPQ13075 1403 aa15.94■□□□□ 0.14
SP140-208ENST00000473711 FANCAO15360 1455 aa15.93■□□□□ 0.14
SP140-208ENST00000473711 ROCK1Q13464 1354 aa15.93■□□□□ 0.14
SP140-208ENST00000473711 HRCP23327 699 aa15.93■□□□□ 0.14
SP140-208ENST00000473711 ARHGEF12Q9NZN5 1544 aa15.93■□□□□ 0.14
SP140-208ENST00000473711 SYCP2Q9BX26 1530 aa15.92■□□□□ 0.14
SP140-208ENST00000473711 ARHGEF5Q12774 1597 aa15.92■□□□□ 0.14
SP140-208ENST00000473711 CCDC141Q6ZP82 1450 aa15.91■□□□□ 0.14
SP140-208ENST00000473711 ANKRD30AQ9BXX3 1397 aa15.9■□□□□ 0.14
SP140-208ENST00000473711 C9orf84Q5VXU9 1444 aa15.9■□□□□ 0.14
SP140-208ENST00000473711 GLI2P10070 1586 aa15.89■□□□□ 0.13
SP140-208ENST00000473711 NCOA1Q15788 1441 aa15.89■□□□□ 0.13
SP140-208ENST00000473711 TRAPPC8Q9Y2L5 1435 aa15.89■□□□□ 0.13
SP140-208ENST00000473711 AFAP1Q8N556 730 aa15.89■□□□□ 0.13
SP140-208ENST00000473711 SCAPERQ9BY12 1400 aa15.88■□□□□ 0.13
SP140-208ENST00000473711 SHANK2Q9UPX8 1470 aa15.88■□□□□ 0.13
SP140-208ENST00000473711 ABCC1P33527 1531 aa15.88■□□□□ 0.13
SP140-208ENST00000473711 ADGRL2O95490 1459 aa15.87■□□□□ 0.13
SP140-208ENST00000473711 ZBTB22O15209 634 aa15.87■□□□□ 0.13
SP140-208ENST00000473711 DHX57Q6P158 1386 aaKnown RBP15.87■□□□□ 0.13
SP140-208ENST00000473711 CROCC2H7BZ55 1655 aa15.86■□□□□ 0.13
SP140-208ENST00000473711 ADGRL1O94910 1474 aa15.86■□□□□ 0.13
SP140-208ENST00000473711 DIP2BQ9P265 1576 aa15.86■□□□□ 0.13
SP140-208ENST00000473711 ZEB1P37275 1124 aaPredicted RBP15.85■□□□□ 0.13
SP140-208ENST00000473711 TRIM52Q96A61 297 aa15.85■□□□□ 0.13
SP140-208ENST00000473711 SPAG9O60271 1321 aaKnown RBP15.85■□□□□ 0.13
SP140-208ENST00000473711 MAP3K4Q9Y6R4 1608 aa15.84■□□□□ 0.13
SP140-208ENST00000473711 ADGBQ8N7X0 1667 aa15.83■□□□□ 0.13
SP140-208ENST00000473711 MYT1LQ9UL68 1186 aa15.83■□□□□ 0.12
SP140-208ENST00000473711 KDM6BO15054 1643 aa15.83■□□□□ 0.12
SP140-208ENST00000473711 GCC2Q8IWJ2 1684 aa15.83■□□□□ 0.12
SP140-208ENST00000473711 KIF15Q9NS87 1388 aa15.82■□□□□ 0.12
SP140-208ENST00000473711 NEO1Q92859 1461 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms