RNA–Protein interactions for RNA: ENST00000473711.1

SP140-208, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 644 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-208ENST00000473711 RRBP1Q9P2E9 1410 aaKnown RBP16.31■□□□□ 0.2
SP140-208ENST00000473711 CCNB3Q8WWL7 1395 aa16.3■□□□□ 0.2
SP140-208ENST00000473711 FAM50AQ14320 339 aaKnown RBP16.29■□□□□ 0.2
SP140-208ENST00000473711 CYB5RLQ6IPT4 315 aa16.29■□□□□ 0.2
SP140-208ENST00000473711 KDM5BQ9UGL1 1544 aa16.28■□□□□ 0.2
SP140-208ENST00000473711 ADCY10Q96PN6 1610 aa16.27■□□□□ 0.2
SP140-208ENST00000473711 NPM1P06748 294 aaKnown RBP eCLIP16.27■□□□□ 0.2
SP140-208ENST00000473711 MYOM3Q5VTT5 1437 aa16.27■□□□□ 0.19
SP140-208ENST00000473711 KCNH8Q96L42 1107 aa16.26■□□□□ 0.19
SP140-208ENST00000473711 ITGAEP38570 1179 aa16.25■□□□□ 0.19
SP140-208ENST00000473711 ZCCHC11Q5TAX3 1644 aaKnown RBP16.25■□□□□ 0.19
SP140-208ENST00000473711 FGD6Q6ZV73 1430 aa16.24■□□□□ 0.19
SP140-208ENST00000473711 TRHP20396 242 aaPredicted RBP16.23■□□□□ 0.19
SP140-208ENST00000473711 SAMD1Q6SPF0 538 aaPredicted RBP16.22■□□□□ 0.19
SP140-208ENST00000473711 KIF14Q15058 1648 aa16.22■□□□□ 0.19
SP140-208ENST00000473711 CFDP1Q9UEE9 299 aaPredicted RBP16.19■□□□□ 0.18
SP140-208ENST00000473711 ABCC10Q5T3U5 1492 aa16.18■□□□□ 0.18
SP140-208ENST00000473711 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.18■□□□□ 0.18
SP140-208ENST00000473711 DSG3P32926 999 aa16.18■□□□□ 0.18
SP140-208ENST00000473711 GPATCH8Q9UKJ3 1502 aaKnown RBP16.18■□□□□ 0.18
SP140-208ENST00000473711 MIA2Q96PC5 1412 aa16.18■□□□□ 0.18
SP140-208ENST00000473711 ZNF777Q9ULD5 760 aaPredicted RBP16.17■□□□□ 0.18
SP140-208ENST00000473711 MYCNP04198 464 aaPredicted RBP16.16■□□□□ 0.18
SP140-208ENST00000473711 ASXL2Q76L83 1435 aa16.16■□□□□ 0.18
SP140-208ENST00000473711 ZNF644Q9H582 1327 aaPredicted RBP16.16■□□□□ 0.18
SP140-208ENST00000473711 PTPN23Q9H3S7 1636 aa16.16■□□□□ 0.18
SP140-208ENST00000473711 TCOF1Q13428 1488 aaKnown RBP16.14■□□□□ 0.17
SP140-208ENST00000473711 WDR7Q9Y4E6 1490 aa16.14■□□□□ 0.17
SP140-208ENST00000473711 ZNF219Q9P2Y4 722 aaPredicted RBP16.13■□□□□ 0.17
SP140-208ENST00000473711 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.13■□□□□ 0.17
SP140-208ENST00000473711 FOXD4L1Q9NU39 408 aa16.1■□□□□ 0.17
SP140-208ENST00000473711 ITSN2Q9NZM3 1697 aa16.09■□□□□ 0.17
SP140-208ENST00000473711 TTC37Q6PGP7 1564 aa16.09■□□□□ 0.17
SP140-208ENST00000473711 CDC42BPAQ5VT25 1732 aa16.08■□□□□ 0.17
SP140-208ENST00000473711 PTPRKQ15262 1439 aa16.08■□□□□ 0.16
SP140-208ENST00000473711 CHIC2Q9UKJ5 165 aa16.07■□□□□ 0.16
SP140-208ENST00000473711 CAMSAP2Q08AD1 1489 aa16.06■□□□□ 0.16
SP140-208ENST00000473711 PLCH2O75038 1416 aa16.06■□□□□ 0.16
SP140-208ENST00000473711 HNRNPMP52272 730 aaKnown RBP eCLIP16.05■□□□□ 0.16
SP140-208ENST00000473711 EFCAB2Q5VUJ9 269 aa16.05■□□□□ 0.16
SP140-208ENST00000473711 ARHGAP5Q13017 1502 aa16.04■□□□□ 0.16
SP140-208ENST00000473711 CDC42BPBQ9Y5S2 1711 aa16.03■□□□□ 0.16
SP140-208ENST00000473711 PREX2Q70Z35 1606 aa16.03■□□□□ 0.16
SP140-208ENST00000473711 ABCC5O15440 1437 aa16.02■□□□□ 0.16
SP140-208ENST00000473711 DAPK1P53355 1430 aa16.02■□□□□ 0.15
SP140-208ENST00000473711 SETD5Q9C0A6 1442 aa16.02■□□□□ 0.15
SP140-208ENST00000473711 RRP7BPQ9NSQ0 103 aa16.01■□□□□ 0.15
SP140-208ENST00000473711 MYO5CQ9NQX4 1742 aa16.01■□□□□ 0.15
SP140-208ENST00000473711 MAPKBP1O60336 1514 aa16■□□□□ 0.15
SP140-208ENST00000473711 CCER1Q8TC90 406 aaPredicted RBP16■□□□□ 0.15
SP140-208ENST00000473711 ABCA9Q8IUA7 1624 aa15.99■□□□□ 0.15
SP140-208ENST00000473711 ILDR1Q86SU0 546 aaPredicted RBP15.99■□□□□ 0.15
SP140-208ENST00000473711 DNMT1P26358 1616 aaKnown RBP15.98■□□□□ 0.15
SP140-208ENST00000473711 SAMD9LQ8IVG5 1584 aa15.98■□□□□ 0.15
SP140-208ENST00000473711 RAB3GAP2Q9H2M9 1393 aa15.98■□□□□ 0.15
SP140-208ENST00000473711 CD109Q6YHK3 1445 aa15.97■□□□□ 0.15
SP140-208ENST00000473711 TSPY4P0CV99 314 aa15.97■□□□□ 0.15
SP140-208ENST00000473711 TSPY10P0CW01 314 aa15.97■□□□□ 0.15
SP140-208ENST00000473711 RSPH4AQ5TD94 716 aa15.97■□□□□ 0.15
SP140-208ENST00000473711 ABCB7O75027 752 aa15.96■□□□□ 0.15
SP140-208ENST00000473711 FAM69CQ0P6D2 419 aa15.96■□□□□ 0.15
SP140-208ENST00000473711 MBD5Q9P267 1494 aa15.96■□□□□ 0.14
SP140-208ENST00000473711 AKNAQ7Z591 1439 aa15.95■□□□□ 0.14
SP140-208ENST00000473711 PLEKHH2Q8IVE3 1493 aa15.95■□□□□ 0.14
SP140-208ENST00000473711 KIAA1107Q9UPP5 1409 aa15.94■□□□□ 0.14
SP140-208ENST00000473711 ARAP3Q8WWN8 1544 aa15.94■□□□□ 0.14
SP140-208ENST00000473711 HFM1A2PYH4 1435 aa15.94■□□□□ 0.14
SP140-208ENST00000473711 NAIPQ13075 1403 aa15.94■□□□□ 0.14
SP140-208ENST00000473711 FANCAO15360 1455 aa15.93■□□□□ 0.14
SP140-208ENST00000473711 ROCK1Q13464 1354 aa15.93■□□□□ 0.14
SP140-208ENST00000473711 HRCP23327 699 aa15.93■□□□□ 0.14
SP140-208ENST00000473711 ARHGEF12Q9NZN5 1544 aa15.93■□□□□ 0.14
SP140-208ENST00000473711 SYCP2Q9BX26 1530 aa15.92■□□□□ 0.14
SP140-208ENST00000473711 ARHGEF5Q12774 1597 aa15.92■□□□□ 0.14
SP140-208ENST00000473711 CCDC141Q6ZP82 1450 aa15.91■□□□□ 0.14
SP140-208ENST00000473711 ANKRD30AQ9BXX3 1397 aa15.9■□□□□ 0.14
SP140-208ENST00000473711 C9orf84Q5VXU9 1444 aa15.9■□□□□ 0.14
SP140-208ENST00000473711 GLI2P10070 1586 aa15.89■□□□□ 0.13
SP140-208ENST00000473711 NCOA1Q15788 1441 aa15.89■□□□□ 0.13
SP140-208ENST00000473711 TRAPPC8Q9Y2L5 1435 aa15.89■□□□□ 0.13
SP140-208ENST00000473711 AFAP1Q8N556 730 aa15.89■□□□□ 0.13
SP140-208ENST00000473711 SCAPERQ9BY12 1400 aa15.88■□□□□ 0.13
SP140-208ENST00000473711 SHANK2Q9UPX8 1470 aa15.88■□□□□ 0.13
SP140-208ENST00000473711 ABCC1P33527 1531 aa15.88■□□□□ 0.13
SP140-208ENST00000473711 ADGRL2O95490 1459 aa15.87■□□□□ 0.13
SP140-208ENST00000473711 ZBTB22O15209 634 aa15.87■□□□□ 0.13
SP140-208ENST00000473711 DHX57Q6P158 1386 aaKnown RBP15.87■□□□□ 0.13
SP140-208ENST00000473711 CROCC2H7BZ55 1655 aa15.86■□□□□ 0.13
SP140-208ENST00000473711 ADGRL1O94910 1474 aa15.86■□□□□ 0.13
SP140-208ENST00000473711 DIP2BQ9P265 1576 aa15.86■□□□□ 0.13
SP140-208ENST00000473711 ZEB1P37275 1124 aaPredicted RBP15.85■□□□□ 0.13
SP140-208ENST00000473711 TRIM52Q96A61 297 aa15.85■□□□□ 0.13
SP140-208ENST00000473711 SPAG9O60271 1321 aaKnown RBP15.85■□□□□ 0.13
SP140-208ENST00000473711 MAP3K4Q9Y6R4 1608 aa15.84■□□□□ 0.13
SP140-208ENST00000473711 ADGBQ8N7X0 1667 aa15.83■□□□□ 0.13
SP140-208ENST00000473711 MYT1LQ9UL68 1186 aa15.83■□□□□ 0.12
SP140-208ENST00000473711 KDM6BO15054 1643 aa15.83■□□□□ 0.12
SP140-208ENST00000473711 GCC2Q8IWJ2 1684 aa15.83■□□□□ 0.12
SP140-208ENST00000473711 KIF15Q9NS87 1388 aa15.82■□□□□ 0.12
SP140-208ENST00000473711 NEO1Q92859 1461 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms