RNA–Protein interactions for RNA: ENST00000473657.1

PHACTR3-207, Transcript of phosphatase and actin regulator 3, humanhuman

TSL 2

Gene PHACTR3, Length 2,408 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR3-207ENST00000473657 ERCC6L2Q5T890 1561 aa13.07□□□□□ -0.32
PHACTR3-207ENST00000473657 ADGBQ8N7X0 1667 aa13.06□□□□□ -0.32
PHACTR3-207ENST00000473657 ACIN1Q9UKV3 1341 aaKnown RBP13.06□□□□□ -0.32
PHACTR3-207ENST00000473657 PLEKHD1A6NEE1 506 aa13.05□□□□□ -0.32
PHACTR3-207ENST00000473657 ZNF644Q9H582 1327 aaPredicted RBP13.05□□□□□ -0.32
PHACTR3-207ENST00000473657 DENND4BO75064 1496 aaPredicted RBP13.05□□□□□ -0.32
PHACTR3-207ENST00000473657 SIN3AQ96ST3 1273 aa13.05□□□□□ -0.32
PHACTR3-207ENST00000473657 RRP7BPQ9NSQ0 103 aa13.05□□□□□ -0.32
PHACTR3-207ENST00000473657 ADGRL2O95490 1459 aa13.05□□□□□ -0.32
PHACTR3-207ENST00000473657 ABCC2Q92887 1545 aa13.05□□□□□ -0.32
PHACTR3-207ENST00000473657 CFDP1Q9UEE9 299 aaPredicted RBP13.04□□□□□ -0.32
PHACTR3-207ENST00000473657 CHIC2Q9UKJ5 165 aa13.04□□□□□ -0.32
PHACTR3-207ENST00000473657 SHANK2Q9UPX8 1470 aa13.01□□□□□ -0.33
PHACTR3-207ENST00000473657 UHRF1BP1LA0JNW5 1464 aa13.01□□□□□ -0.33
PHACTR3-207ENST00000473657 PREX2Q70Z35 1606 aa13.01□□□□□ -0.33
PHACTR3-207ENST00000473657 NCOA1Q15788 1441 aa13□□□□□ -0.33
PHACTR3-207ENST00000473657 ARHGEF5Q12774 1597 aa12.99□□□□□ -0.33
PHACTR3-207ENST00000473657 CDC42BPBQ9Y5S2 1711 aa12.99□□□□□ -0.33
PHACTR3-207ENST00000473657 NEUROD1Q13562 356 aa12.99□□□□□ -0.33
PHACTR3-207ENST00000473657 KDM5BQ9UGL1 1544 aa12.99□□□□□ -0.33
PHACTR3-207ENST00000473657 PPP1R15AO75807 674 aaPredicted RBP12.98□□□□□ -0.33
PHACTR3-207ENST00000473657 SAMD9LQ8IVG5 1584 aa12.96□□□□□ -0.34
PHACTR3-207ENST00000473657 ZCCHC11Q5TAX3 1644 aaKnown RBP12.95□□□□□ -0.34
PHACTR3-207ENST00000473657 MBD5Q9P267 1494 aa12.95□□□□□ -0.34
PHACTR3-207ENST00000473657 TTC37Q6PGP7 1564 aa12.95□□□□□ -0.34
PHACTR3-207ENST00000473657 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.95□□□□□ -0.34
PHACTR3-207ENST00000473657 MPHOSPH9Q99550 1183 aa12.95□□□□□ -0.34
PHACTR3-207ENST00000473657 TONSLQ96HA7 1378 aa12.95□□□□□ -0.34
PHACTR3-207ENST00000473657 ANKRD30AQ9BXX3 1397 aa12.94□□□□□ -0.34
PHACTR3-207ENST00000473657 TRIM52Q96A61 297 aa12.93□□□□□ -0.34
PHACTR3-207ENST00000473657 C9orf84Q5VXU9 1444 aa12.93□□□□□ -0.34
PHACTR3-207ENST00000473657 PZPP20742 1482 aa12.93□□□□□ -0.34
PHACTR3-207ENST00000473657 MYO5CQ9NQX4 1742 aa12.93□□□□□ -0.34
PHACTR3-207ENST00000473657 ZNF777Q9ULD5 760 aaPredicted RBP12.92□□□□□ -0.34
PHACTR3-207ENST00000473657 MIER1Q8N108 512 aa12.92□□□□□ -0.34
PHACTR3-207ENST00000473657 ANKRD30BQ9BXX2 1392 aa12.91□□□□□ -0.34
PHACTR3-207ENST00000473657 CCDC141Q6ZP82 1450 aa12.91□□□□□ -0.34
PHACTR3-207ENST00000473657 MAST1Q9Y2H9 1570 aa12.91□□□□□ -0.34
PHACTR3-207ENST00000473657 KDM5DQ9BY66 1539 aa12.9□□□□□ -0.34
PHACTR3-207ENST00000473657 ANKRD50Q9ULJ7 1429 aa12.89□□□□□ -0.35
PHACTR3-207ENST00000473657 RPRD2Q5VT52 1461 aaKnown RBP12.89□□□□□ -0.35
PHACTR3-207ENST00000473657 RSPH4AQ5TD94 716 aa12.89□□□□□ -0.35
PHACTR3-207ENST00000473657 KIAA1107Q9UPP5 1409 aa12.89□□□□□ -0.35
PHACTR3-207ENST00000473657 PLEKHH2Q8IVE3 1493 aa12.88□□□□□ -0.35
PHACTR3-207ENST00000473657 ARHGAP5Q13017 1502 aa12.88□□□□□ -0.35
PHACTR3-207ENST00000473657 SYCP2Q9BX26 1530 aa12.87□□□□□ -0.35
PHACTR3-207ENST00000473657 ARAP3Q8WWN8 1544 aa12.86□□□□□ -0.35
PHACTR3-207ENST00000473657 PLCH2O75038 1416 aa12.86□□□□□ -0.35
PHACTR3-207ENST00000473657 TEX14Q8IWB6 1497 aa12.85□□□□□ -0.35
PHACTR3-207ENST00000473657 TSPY4P0CV99 314 aa12.85□□□□□ -0.35
PHACTR3-207ENST00000473657 TSPY10P0CW01 314 aa12.85□□□□□ -0.35
PHACTR3-207ENST00000473657 HNRNPMP52272 730 aaKnown RBP eCLIP12.85□□□□□ -0.35
PHACTR3-207ENST00000473657 PLXNC1O60486 1568 aa12.85□□□□□ -0.35
PHACTR3-207ENST00000473657 SLC4A1APQ9BWU0 796 aaKnown RBP12.84□□□□□ -0.35
PHACTR3-207ENST00000473657 KIF15Q9NS87 1388 aa12.84□□□□□ -0.35
PHACTR3-207ENST00000473657 FOXD1Q16676 465 aa12.82□□□□□ -0.36
PHACTR3-207ENST00000473657 ABCC1P33527 1531 aa12.82□□□□□ -0.36
PHACTR3-207ENST00000473657 ARHGEF12Q9NZN5 1544 aa12.82□□□□□ -0.36
PHACTR3-207ENST00000473657 WDR7Q9Y4E6 1490 aa12.81□□□□□ -0.36
PHACTR3-207ENST00000473657 UNC13BO14795 1591 aa12.8□□□□□ -0.36
PHACTR3-207ENST00000473657 CENPBP07199 599 aaPredicted RBP12.8□□□□□ -0.36
PHACTR3-207ENST00000473657 L3MBTL2Q969R5 705 aa12.79□□□□□ -0.36
PHACTR3-207ENST00000473657 ABCA9Q8IUA7 1624 aa12.79□□□□□ -0.36
PHACTR3-207ENST00000473657 NUP155O75694 1391 aa12.78□□□□□ -0.36
PHACTR3-207ENST00000473657 KCNH8Q96L42 1107 aa12.78□□□□□ -0.36
PHACTR3-207ENST00000473657 EFCAB2Q5VUJ9 269 aa12.77□□□□□ -0.37
PHACTR3-207ENST00000473657 PKD2Q13563 968 aa12.77□□□□□ -0.37
PHACTR3-207ENST00000473657 OSCARQ8IYS5 282 aa12.77□□□□□ -0.37
PHACTR3-207ENST00000473657 DUOX2Q9NRD8 1548 aa12.77□□□□□ -0.37
PHACTR3-207ENST00000473657 FAM135AQ9P2D6 1515 aa12.76□□□□□ -0.37
PHACTR3-207ENST00000473657 MAGI2Q86UL8 1455 aa12.76□□□□□ -0.37
PHACTR3-207ENST00000473657 IQGAP3Q86VI3 1631 aa12.75□□□□□ -0.37
PHACTR3-207ENST00000473657 ERBINQ96RT1 1412 aa12.74□□□□□ -0.37
PHACTR3-207ENST00000473657 RTEL1-TNFRSF6BF6WH68 1400 aa12.73□□□□□ -0.37
PHACTR3-207ENST00000473657 TRAPPC8Q9Y2L5 1435 aa12.73□□□□□ -0.37
PHACTR3-207ENST00000473657 ASXL2Q76L83 1435 aa12.73□□□□□ -0.37
PHACTR3-207ENST00000473657 SCAF1Q9H7N4 1312 aaKnown RBP12.72□□□□□ -0.37
PHACTR3-207ENST00000473657 DDX10Q13206 875 aaKnown RBP12.72□□□□□ -0.37
PHACTR3-207ENST00000473657 NBPF8Q3BBV2 869 aa12.72□□□□□ -0.37
PHACTR3-207ENST00000473657 HIRIP3Q9BW71 556 aaPredicted RBP12.72□□□□□ -0.37
PHACTR3-207ENST00000473657 ZFYVE16Q7Z3T8 1539 aa12.72□□□□□ -0.37
PHACTR3-207ENST00000473657 UHRF1BP1Q6BDS2 1440 aa12.71□□□□□ -0.38
PHACTR3-207ENST00000473657 SPATA31E1Q6ZUB1 1445 aa12.7□□□□□ -0.38
PHACTR3-207ENST00000473657 INO80Q9ULG1 1556 aaPredicted RBP12.7□□□□□ -0.38
PHACTR3-207ENST00000473657 FANCAO15360 1455 aa12.7□□□□□ -0.38
PHACTR3-207ENST00000473657 HSPA5P11021 654 aaKnown RBP12.7□□□□□ -0.38
PHACTR3-207ENST00000473657 EIF4G2P78344 907 aaKnown RBP eCLIP12.69□□□□□ -0.38
PHACTR3-207ENST00000473657 POLR1AO95602 1720 aaPredicted RBP12.69□□□□□ -0.38
PHACTR3-207ENST00000473657 YTHDC1Q96MU7 727 aaKnown RBP12.68□□□□□ -0.38
PHACTR3-207ENST00000473657 ATP10AO60312 1499 aa12.68□□□□□ -0.38
PHACTR3-207ENST00000473657 DEPDC5O75140 1603 aa12.67□□□□□ -0.38
PHACTR3-207ENST00000473657 PLA2R1Q13018 1463 aa12.66□□□□□ -0.38
PHACTR3-207ENST00000473657 ATP7AQ04656 1500 aa12.66□□□□□ -0.38
PHACTR3-207ENST00000473657 WASHC2AQ641Q2 1341 aa12.65□□□□□ -0.38
PHACTR3-207ENST00000473657 RALGAPBQ86X10 1494 aa12.65□□□□□ -0.38
PHACTR3-207ENST00000473657 SPAG9O60271 1321 aaKnown RBP12.65□□□□□ -0.38
PHACTR3-207ENST00000473657 ADGRL1O94910 1474 aa12.64□□□□□ -0.39
PHACTR3-207ENST00000473657 CFAP74Q9C0B2 1584 aa12.63□□□□□ -0.39
PHACTR3-207ENST00000473657 EIF2AK4Q9P2K8 1649 aaKnown RBP12.63□□□□□ -0.39
PHACTR3-207ENST00000473657 KDM5CP41229 1560 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms