RNA–Protein interactions for RNA: ENST00000473522.1

RPUSD3-214, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-214ENST00000473522 CFAP74Q9C0B2 1584 aa27.84■■■□□ 2.05
RPUSD3-214ENST00000473522 ARHGAP5Q13017 1502 aa27.83■■■□□ 2.05
RPUSD3-214ENST00000473522 EHBP1L1Q8N3D4 1523 aa27.83■■■□□ 2.05
RPUSD3-214ENST00000473522 CFDP1Q9UEE9 299 aaPredicted RBP27.83■■■□□ 2.05
RPUSD3-214ENST00000473522 LRRC9Q6ZRR7 1453 aa27.83■■■□□ 2.04
RPUSD3-214ENST00000473522 APLP2Q06481 763 aa27.82■■■□□ 2.04
RPUSD3-214ENST00000473522 MYO5CQ9NQX4 1742 aa27.78■■■□□ 2.04
RPUSD3-214ENST00000473522 AFAP1Q8N556 730 aa27.78■■■□□ 2.04
RPUSD3-214ENST00000473522 POGZQ7Z3K3 1410 aa27.77■■■□□ 2.04
RPUSD3-214ENST00000473522 ZNF777Q9ULD5 760 aaPredicted RBP27.76■■■□□ 2.03
RPUSD3-214ENST00000473522 NCOA2Q15596 1464 aa27.76■■■□□ 2.03
RPUSD3-214ENST00000473522 FRMPD1Q5SYB0 1578 aa27.75■■■□□ 2.03
RPUSD3-214ENST00000473522 KDM4FA0A1W2PPD8 638 aa27.74■■■□□ 2.03
RPUSD3-214ENST00000473522 MAGI2Q86UL8 1455 aa27.73■■■□□ 2.03
RPUSD3-214ENST00000473522 PREX2Q70Z35 1606 aa27.73■■■□□ 2.03
RPUSD3-214ENST00000473522 ARHGEF12Q9NZN5 1544 aa27.72■■■□□ 2.03
RPUSD3-214ENST00000473522 KIAA1107Q9UPP5 1409 aa27.72■■■□□ 2.03
RPUSD3-214ENST00000473522 CDC42BPBQ9Y5S2 1711 aa27.72■■■□□ 2.03
RPUSD3-214ENST00000473522 HNRNPMP52272 730 aaKnown RBP eCLIP27.7■■■□□ 2.02
RPUSD3-214ENST00000473522 ZNF518AQ6AHZ1 1483 aa27.69■■■□□ 2.02
RPUSD3-214ENST00000473522 ZNF644Q9H582 1327 aaPredicted RBP27.68■■■□□ 2.02
RPUSD3-214ENST00000473522 TRAPPC8Q9Y2L5 1435 aa27.68■■■□□ 2.02
RPUSD3-214ENST00000473522 ZMYM4Q5VZL5 1548 aa27.67■■■□□ 2.02
RPUSD3-214ENST00000473522 CDC42BPAQ5VT25 1732 aa27.67■■■□□ 2.02
RPUSD3-214ENST00000473522 RICTORQ6R327 1708 aa27.67■■■□□ 2.02
RPUSD3-214ENST00000473522 PLEKHH2Q8IVE3 1493 aa27.66■■■□□ 2.02
RPUSD3-214ENST00000473522 ABCC1P33527 1531 aa27.65■■■□□ 2.02
RPUSD3-214ENST00000473522 YEATS2Q9ULM3 1422 aa27.64■■■□□ 2.02
RPUSD3-214ENST00000473522 SUPT6HQ7KZ85 1726 aaKnown RBP27.62■■■□□ 2.01
RPUSD3-214ENST00000473522 MLH3Q9UHC1 1453 aa27.62■■■□□ 2.01
RPUSD3-214ENST00000473522 RSPH4AQ5TD94 716 aa27.61■■■□□ 2.01
RPUSD3-214ENST00000473522 SAMD9LQ8IVG5 1584 aa27.6■■■□□ 2.01
RPUSD3-214ENST00000473522 KDM5CP41229 1560 aa27.6■■■□□ 2.01
RPUSD3-214ENST00000473522 MBD5Q9P267 1494 aa27.58■■■□□ 2.01
RPUSD3-214ENST00000473522 AEBP2Q6ZN18 517 aaPredicted RBP27.58■■■□□ 2.01
RPUSD3-214ENST00000473522 ZFYVE16Q7Z3T8 1539 aa27.57■■■□□ 2
RPUSD3-214ENST00000473522 MIA2Q96PC5 1412 aa27.57■■■□□ 2
RPUSD3-214ENST00000473522 ATP10AO60312 1499 aa27.57■■■□□ 2
RPUSD3-214ENST00000473522 MYT1LQ9UL68 1186 aa27.55■■■□□ 2
RPUSD3-214ENST00000473522 SPAG9O60271 1321 aaKnown RBP27.55■■■□□ 2
RPUSD3-214ENST00000473522 MYOM3Q5VTT5 1437 aa27.55■■■□□ 2
RPUSD3-214ENST00000473522 ARHGEF40Q8TER5 1519 aa27.54■■■□□ 2
RPUSD3-214ENST00000473522 SYCP2Q9BX26 1530 aa27.53■■■□□ 2
RPUSD3-214ENST00000473522 ARID4BQ4LE39 1312 aaPredicted RBP27.53■■■□□ 2
RPUSD3-214ENST00000473522 ITSN2Q9NZM3 1697 aa27.5■■□□□ 1.99
RPUSD3-214ENST00000473522 C9orf84Q5VXU9 1444 aa27.48■■□□□ 1.99
RPUSD3-214ENST00000473522 CAMSAP2Q08AD1 1489 aa27.47■■□□□ 1.99
RPUSD3-214ENST00000473522 RTEL1-TNFRSF6BF6WH68 1400 aa27.45■■□□□ 1.98
RPUSD3-214ENST00000473522 HECW2Q9P2P5 1572 aa27.44■■□□□ 1.98
RPUSD3-214ENST00000473522 TSPY4P0CV99 314 aa27.44■■□□□ 1.98
RPUSD3-214ENST00000473522 TSPY10P0CW01 314 aa27.44■■□□□ 1.98
RPUSD3-214ENST00000473522 CCDC141Q6ZP82 1450 aa27.4■■□□□ 1.98
RPUSD3-214ENST00000473522 FGD6Q6ZV73 1430 aa27.39■■□□□ 1.97
RPUSD3-214ENST00000473522 DIP2CQ9Y2E4 1556 aa27.39■■□□□ 1.97
RPUSD3-214ENST00000473522 REREQ9P2R6 1566 aa27.38■■□□□ 1.97
RPUSD3-214ENST00000473522 KIDINS220Q9ULH0 1771 aa27.37■■□□□ 1.97
RPUSD3-214ENST00000473522 MLECQ14165 292 aa27.36■■□□□ 1.97
RPUSD3-214ENST00000473522 ARHGEF5Q12774 1597 aa27.35■■□□□ 1.97
RPUSD3-214ENST00000473522 AGLP35573 1532 aa27.35■■□□□ 1.97
RPUSD3-214ENST00000473522 ATP7AQ04656 1500 aa27.35■■□□□ 1.97
RPUSD3-214ENST00000473522 TCOF1Q13428 1488 aaKnown RBP27.33■■□□□ 1.97
RPUSD3-214ENST00000473522 ABCA6Q8N139 1617 aa27.33■■□□□ 1.97
RPUSD3-214ENST00000473522 PPARGC1BQ86YN6 1023 aaKnown RBP27.32■■□□□ 1.96
RPUSD3-214ENST00000473522 ADAMTSL3P82987 1691 aa27.32■■□□□ 1.96
RPUSD3-214ENST00000473522 DHX29Q7Z478 1369 aaKnown RBP27.31■■□□□ 1.96
RPUSD3-214ENST00000473522 INO80Q9ULG1 1556 aaPredicted RBP27.31■■□□□ 1.96
RPUSD3-214ENST00000473522 BCORL1Q5H9F3 1711 aa27.3■■□□□ 1.96
RPUSD3-214ENST00000473522 SIGLEC1Q9BZZ2 1709 aa27.3■■□□□ 1.96
RPUSD3-214ENST00000473522 A2MP01023 1474 aa27.3■■□□□ 1.96
RPUSD3-214ENST00000473522 ABCC5O15440 1437 aa27.29■■□□□ 1.96
RPUSD3-214ENST00000473522 PTPRMP28827 1452 aa27.26■■□□□ 1.95
RPUSD3-214ENST00000473522 PTPN23Q9H3S7 1636 aa27.25■■□□□ 1.95
RPUSD3-214ENST00000473522 PPP6R1Q9UPN7 881 aa27.23■■□□□ 1.95
RPUSD3-214ENST00000473522 FAM50AQ14320 339 aaKnown RBP27.22■■□□□ 1.95
RPUSD3-214ENST00000473522 DAPK1P53355 1430 aa27.21■■□□□ 1.95
RPUSD3-214ENST00000473522 PLXNC1O60486 1568 aa27.2■■□□□ 1.94
RPUSD3-214ENST00000473522 MAST1Q9Y2H9 1570 aa27.2■■□□□ 1.94
RPUSD3-214ENST00000473522 MADDQ8WXG6 1647 aa27.18■■□□□ 1.94
RPUSD3-214ENST00000473522 KIF3BO15066 747 aa27.17■■□□□ 1.94
RPUSD3-214ENST00000473522 GGT6Q6P531 493 aa27.17■■□□□ 1.94
RPUSD3-214ENST00000473522 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.17■■□□□ 1.94
RPUSD3-214ENST00000473522 SHANK2Q9UPX8 1470 aa27.17■■□□□ 1.94
RPUSD3-214ENST00000473522 ESF1Q9H501 851 aaKnown RBP27.16■■□□□ 1.94
RPUSD3-214ENST00000473522 RRP7BPQ9NSQ0 103 aa27.13■■□□□ 1.93
RPUSD3-214ENST00000473522 CHIC2Q9UKJ5 165 aa27.13■■□□□ 1.93
RPUSD3-214ENST00000473522 ADGBQ8N7X0 1667 aa27.11■■□□□ 1.93
RPUSD3-214ENST00000473522 CNTLNQ9NXG0 1405 aa27.11■■□□□ 1.93
RPUSD3-214ENST00000473522 CEBPAP49715 358 aaPredicted RBP27.11■■□□□ 1.93
RPUSD3-214ENST00000473522 ANKRD30AQ9BXX3 1397 aa27.1■■□□□ 1.93
RPUSD3-214ENST00000473522 NCOA1Q15788 1441 aa27.1■■□□□ 1.93
RPUSD3-214ENST00000473522 DNMT1P26358 1616 aaKnown RBP27.1■■□□□ 1.93
RPUSD3-214ENST00000473522 KIF15Q9NS87 1388 aa27.09■■□□□ 1.93
RPUSD3-214ENST00000473522 ZMYM3Q14202 1370 aa27.07■■□□□ 1.92
RPUSD3-214ENST00000473522 PTPRKQ15262 1439 aa27.06■■□□□ 1.92
RPUSD3-214ENST00000473522 RRBP1Q9P2E9 1410 aaKnown RBP27.06■■□□□ 1.92
RPUSD3-214ENST00000473522 DUOX2Q9NRD8 1548 aa27.05■■□□□ 1.92
RPUSD3-214ENST00000473522 PLPPR3Q6T4P5 718 aa27.04■■□□□ 1.92
RPUSD3-214ENST00000473522 ADGRL2O95490 1459 aa27.04■■□□□ 1.92
RPUSD3-214ENST00000473522 RIMS1Q86UR5 1692 aaKnown RBP27.04■■□□□ 1.92
RPUSD3-214ENST00000473522 WASHC2CQ9Y4E1 1318 aa27■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms