RNA–Protein interactions for RNA: ENST00000473377.5

CGN-206, Transcript of cingulin, humanhuman

TSL 1 (best)

Gene CGN, Length 2,956 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGN-206ENST00000473377 HIRIP3Q9BW71 556 aaPredicted RBP13.29□□□□□ -0.28
CGN-206ENST00000473377 GPATCH8Q9UKJ3 1502 aaKnown RBP13.29□□□□□ -0.28
CGN-206ENST00000473377 YTHDC1Q96MU7 727 aaKnown RBP13.28□□□□□ -0.28
CGN-206ENST00000473377 CAMSAP2Q08AD1 1489 aa13.27□□□□□ -0.29
CGN-206ENST00000473377 DENND4BO75064 1496 aaPredicted RBP13.26□□□□□ -0.29
CGN-206ENST00000473377 DNMT1P26358 1616 aaKnown RBP13.24□□□□□ -0.29
CGN-206ENST00000473377 GCC2Q8IWJ2 1684 aa13.24□□□□□ -0.29
CGN-206ENST00000473377 MPHOSPH9Q99550 1183 aa13.23□□□□□ -0.29
CGN-206ENST00000473377 TONSLQ96HA7 1378 aa13.23□□□□□ -0.29
CGN-206ENST00000473377 PPP1R15AO75807 674 aaPredicted RBP13.22□□□□□ -0.29
CGN-206ENST00000473377 KCNH8Q96L42 1107 aa13.22□□□□□ -0.29
CGN-206ENST00000473377 SHROOM2Q13796 1616 aa13.22□□□□□ -0.29
CGN-206ENST00000473377 ADCY10Q96PN6 1610 aa13.22□□□□□ -0.29
CGN-206ENST00000473377 ABCC10Q5T3U5 1492 aa13.22□□□□□ -0.29
CGN-206ENST00000473377 HNRNPMP52272 730 aaKnown RBP eCLIP13.21□□□□□ -0.29
CGN-206ENST00000473377 AKNAQ7Z591 1439 aa13.21□□□□□ -0.3
CGN-206ENST00000473377 CDC42BPAQ5VT25 1732 aa13.21□□□□□ -0.3
CGN-206ENST00000473377 ITSN2Q9NZM3 1697 aa13.2□□□□□ -0.3
CGN-206ENST00000473377 ROCK1Q13464 1354 aa13.18□□□□□ -0.3
CGN-206ENST00000473377 NCOA1Q15788 1441 aa13.17□□□□□ -0.3
CGN-206ENST00000473377 CLASP1Q7Z460 1538 aa13.17□□□□□ -0.3
CGN-206ENST00000473377 SLC4A1APQ9BWU0 796 aaKnown RBP13.17□□□□□ -0.3
CGN-206ENST00000473377 SCAF1Q9H7N4 1312 aaKnown RBP13.16□□□□□ -0.3
CGN-206ENST00000473377 ABCC2Q92887 1545 aa13.14□□□□□ -0.31
CGN-206ENST00000473377 TIMELESSQ9UNS1 1208 aa13.14□□□□□ -0.31
CGN-206ENST00000473377 TTC37Q6PGP7 1564 aa13.14□□□□□ -0.31
CGN-206ENST00000473377 KDM5BQ9UGL1 1544 aa13.14□□□□□ -0.31
CGN-206ENST00000473377 DDX10Q13206 875 aaKnown RBP13.14□□□□□ -0.31
CGN-206ENST00000473377 C9orf84Q5VXU9 1444 aa13.13□□□□□ -0.31
CGN-206ENST00000473377 ACIN1Q9UKV3 1341 aaKnown RBP13.12□□□□□ -0.31
CGN-206ENST00000473377 CROCC2H7BZ55 1655 aa13.11□□□□□ -0.31
CGN-206ENST00000473377 L3MBTL2Q969R5 705 aa13.11□□□□□ -0.31
CGN-206ENST00000473377 ANKRD30AQ9BXX3 1397 aa13.11□□□□□ -0.31
CGN-206ENST00000473377 CDC42BPBQ9Y5S2 1711 aa13.11□□□□□ -0.31
CGN-206ENST00000473377 TSPY4P0CV99 314 aa13.11□□□□□ -0.31
CGN-206ENST00000473377 TSPY10P0CW01 314 aa13.11□□□□□ -0.31
CGN-206ENST00000473377 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.11□□□□□ -0.31
CGN-206ENST00000473377 SAMD9LQ8IVG5 1584 aa13.1□□□□□ -0.31
CGN-206ENST00000473377 PZPP20742 1482 aa13.1□□□□□ -0.31
CGN-206ENST00000473377 ANKRD50Q9ULJ7 1429 aa13.1□□□□□ -0.31
CGN-206ENST00000473377 ADGBQ8N7X0 1667 aa13.09□□□□□ -0.31
CGN-206ENST00000473377 ANKRD30BQ9BXX2 1392 aa13.09□□□□□ -0.31
CGN-206ENST00000473377 ARHGAP5Q13017 1502 aa13.09□□□□□ -0.31
CGN-206ENST00000473377 MBD5Q9P267 1494 aa13.09□□□□□ -0.31
CGN-206ENST00000473377 ADGRL2O95490 1459 aa13.09□□□□□ -0.31
CGN-206ENST00000473377 PKD2Q13563 968 aa13.08□□□□□ -0.31
CGN-206ENST00000473377 SYCP2Q9BX26 1530 aa13.08□□□□□ -0.32
CGN-206ENST00000473377 ZCCHC11Q5TAX3 1644 aaKnown RBP13.08□□□□□ -0.32
CGN-206ENST00000473377 KIF15Q9NS87 1388 aa13.07□□□□□ -0.32
CGN-206ENST00000473377 PREX2Q70Z35 1606 aa13.07□□□□□ -0.32
CGN-206ENST00000473377 CENPBP07199 599 aaPredicted RBP13.07□□□□□ -0.32
CGN-206ENST00000473377 NUP155O75694 1391 aa13.06□□□□□ -0.32
CGN-206ENST00000473377 PLPPR3Q6T4P5 718 aa13.06□□□□□ -0.32
CGN-206ENST00000473377 NBPF8Q3BBV2 869 aa13.05□□□□□ -0.32
CGN-206ENST00000473377 CCDC141Q6ZP82 1450 aa13.04□□□□□ -0.32
CGN-206ENST00000473377 ARHGEF12Q9NZN5 1544 aa13.04□□□□□ -0.32
CGN-206ENST00000473377 SHANK2Q9UPX8 1470 aa13.03□□□□□ -0.32
CGN-206ENST00000473377 ZNF326Q5BKZ1 582 aaKnown RBP13.03□□□□□ -0.32
CGN-206ENST00000473377 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.03□□□□□ -0.32
CGN-206ENST00000473377 RPRD2Q5VT52 1461 aaKnown RBP13.03□□□□□ -0.32
CGN-206ENST00000473377 HSPA5P11021 654 aaKnown RBP13.02□□□□□ -0.33
CGN-206ENST00000473377 ARHGEF5Q12774 1597 aa13.01□□□□□ -0.33
CGN-206ENST00000473377 OSCARQ8IYS5 282 aa13.01□□□□□ -0.33
CGN-206ENST00000473377 KIAA1107Q9UPP5 1409 aa13.01□□□□□ -0.33
CGN-206ENST00000473377 UHRF1BP1LA0JNW5 1464 aa13.01□□□□□ -0.33
CGN-206ENST00000473377 TEX14Q8IWB6 1497 aa13.01□□□□□ -0.33
CGN-206ENST00000473377 MYO5CQ9NQX4 1742 aa13□□□□□ -0.33
CGN-206ENST00000473377 GTF3C3Q9Y5Q9 886 aa13□□□□□ -0.33
CGN-206ENST00000473377 AFAP1Q8N556 730 aa12.99□□□□□ -0.33
CGN-206ENST00000473377 PLCH2O75038 1416 aa12.98□□□□□ -0.33
CGN-206ENST00000473377 TRAPPC8Q9Y2L5 1435 aa12.98□□□□□ -0.33
CGN-206ENST00000473377 EFCAB2Q5VUJ9 269 aa12.98□□□□□ -0.33
CGN-206ENST00000473377 PLEKHH2Q8IVE3 1493 aa12.96□□□□□ -0.33
CGN-206ENST00000473377 C11orf95C9JLR9 678 aaPredicted RBP12.96□□□□□ -0.33
CGN-206ENST00000473377 WASHC2AQ641Q2 1341 aa12.95□□□□□ -0.34
CGN-206ENST00000473377 EIF4G2P78344 907 aaKnown RBP eCLIP12.95□□□□□ -0.34
CGN-206ENST00000473377 KDM2AQ9Y2K7 1162 aa12.95□□□□□ -0.34
CGN-206ENST00000473377 WDR7Q9Y4E6 1490 aa12.94□□□□□ -0.34
CGN-206ENST00000473377 RSPH4AQ5TD94 716 aa12.94□□□□□ -0.34
CGN-206ENST00000473377 ASXL2Q76L83 1435 aa12.93□□□□□ -0.34
CGN-206ENST00000473377 FAM135AQ9P2D6 1515 aa12.92□□□□□ -0.34
CGN-206ENST00000473377 ABCC1P33527 1531 aa12.92□□□□□ -0.34
CGN-206ENST00000473377 MYT1LQ9UL68 1186 aa12.91□□□□□ -0.34
CGN-206ENST00000473377 RGL3Q3MIN7 710 aa12.9□□□□□ -0.34
CGN-206ENST00000473377 SPAG9O60271 1321 aaKnown RBP12.9□□□□□ -0.34
CGN-206ENST00000473377 KDM5DQ9BY66 1539 aa12.9□□□□□ -0.35
CGN-206ENST00000473377 MAST1Q9Y2H9 1570 aa12.89□□□□□ -0.35
CGN-206ENST00000473377 DCAF11Q8TEB1 546 aa12.89□□□□□ -0.35
CGN-206ENST00000473377 FANCAO15360 1455 aa12.88□□□□□ -0.35
CGN-206ENST00000473377 ANP32CO43423 234 aa12.88□□□□□ -0.35
CGN-206ENST00000473377 POLR3GLQ9BT43 218 aa12.88□□□□□ -0.35
CGN-206ENST00000473377 CNGB1Q14028 1251 aaPredicted RBP12.87□□□□□ -0.35
CGN-206ENST00000473377 NPM1P06748 294 aaKnown RBP eCLIP12.87□□□□□ -0.35
CGN-206ENST00000473377 PLA2R1Q13018 1463 aa12.86□□□□□ -0.35
CGN-206ENST00000473377 PLXNC1O60486 1568 aa12.86□□□□□ -0.35
CGN-206ENST00000473377 SCAPERQ9BY12 1400 aa12.85□□□□□ -0.35
CGN-206ENST00000473377 DUOX2Q9NRD8 1548 aa12.85□□□□□ -0.35
CGN-206ENST00000473377 ADGRL1O94910 1474 aa12.84□□□□□ -0.35
CGN-206ENST00000473377 SPATA31E1Q6ZUB1 1445 aa12.84□□□□□ -0.35
CGN-206ENST00000473377 UNC13BO14795 1591 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms