RNA–Protein interactions for RNA: ENST00000473344.1

CKS1B-205, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 390 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-205ENST00000473344 RAPGEF6Q8TEU7 1601 aa11.61□□□□□ -0.55
CKS1B-205ENST00000473344 NEO1Q92859 1461 aa11.61□□□□□ -0.55
CKS1B-205ENST00000473344 SAMD9Q5K651 1589 aa11.61□□□□□ -0.55
CKS1B-205ENST00000473344 PTPRMP28827 1452 aa11.59□□□□□ -0.55
CKS1B-205ENST00000473344 PLEKHD1A6NEE1 506 aa11.59□□□□□ -0.55
CKS1B-205ENST00000473344 EEA1Q15075 1411 aa11.57□□□□□ -0.56
CKS1B-205ENST00000473344 NUP153P49790 1475 aaKnown RBP11.57□□□□□ -0.56
CKS1B-205ENST00000473344 FHOD3Q2V2M9 1422 aa11.56□□□□□ -0.56
CKS1B-205ENST00000473344 FBXO41Q8TF61 875 aa11.55□□□□□ -0.56
CKS1B-205ENST00000473344 DENND4BO75064 1496 aaPredicted RBP11.55□□□□□ -0.56
CKS1B-205ENST00000473344 ADAMTSL3P82987 1691 aa11.55□□□□□ -0.56
CKS1B-205ENST00000473344 POLA2Q14181 598 aa11.54□□□□□ -0.56
CKS1B-205ENST00000473344 AKNAQ7Z591 1439 aa11.53□□□□□ -0.56
CKS1B-205ENST00000473344 FANCAO15360 1455 aa11.53□□□□□ -0.56
CKS1B-205ENST00000473344 SLC4A1APQ9BWU0 796 aaKnown RBP11.53□□□□□ -0.56
CKS1B-205ENST00000473344 FRMPD1Q5SYB0 1578 aa11.53□□□□□ -0.56
CKS1B-205ENST00000473344 BCORL1Q5H9F3 1711 aa11.52□□□□□ -0.56
CKS1B-205ENST00000473344 CFAP74Q9C0B2 1584 aa11.52□□□□□ -0.57
CKS1B-205ENST00000473344 MADDQ8WXG6 1647 aa11.52□□□□□ -0.57
CKS1B-205ENST00000473344 POGZQ7Z3K3 1410 aa11.52□□□□□ -0.57
CKS1B-205ENST00000473344 EFCAB5A4FU69 1503 aa11.5□□□□□ -0.57
CKS1B-205ENST00000473344 ARHGEF40Q8TER5 1519 aa11.5□□□□□ -0.57
CKS1B-205ENST00000473344 PCF11O94913 1555 aaKnown RBP11.5□□□□□ -0.57
CKS1B-205ENST00000473344 FOXD4L1Q9NU39 408 aa11.5□□□□□ -0.57
CKS1B-205ENST00000473344 ATP1B4Q9UN42 357 aaPredicted RBP11.5□□□□□ -0.57
CKS1B-205ENST00000473344 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.5□□□□□ -0.57
CKS1B-205ENST00000473344 LMTK3Q96Q04 1460 aa11.49□□□□□ -0.57
CKS1B-205ENST00000473344 RICTORQ6R327 1708 aa11.47□□□□□ -0.57
CKS1B-205ENST00000473344 ZFYVE16Q7Z3T8 1539 aa11.47□□□□□ -0.57
CKS1B-205ENST00000473344 MLECQ14165 292 aa11.47□□□□□ -0.57
CKS1B-205ENST00000473344 RIMS1Q86UR5 1692 aaKnown RBP11.46□□□□□ -0.57
CKS1B-205ENST00000473344 TTC37Q6PGP7 1564 aa11.46□□□□□ -0.57
CKS1B-205ENST00000473344 MAGI2Q86UL8 1455 aa11.46□□□□□ -0.57
CKS1B-205ENST00000473344 UBTFP17480 764 aaKnown RBP11.46□□□□□ -0.57
CKS1B-205ENST00000473344 EHMT2Q96KQ7 1210 aa11.46□□□□□ -0.57
CKS1B-205ENST00000473344 CDK11AQ9UQ88 783 aaPredicted RBP11.46□□□□□ -0.57
CKS1B-205ENST00000473344 ZBTB12Q9Y330 459 aaPredicted RBP11.46□□□□□ -0.57
CKS1B-205ENST00000473344 ZMYM4Q5VZL5 1548 aa11.45□□□□□ -0.58
CKS1B-205ENST00000473344 YEATS2Q9ULM3 1422 aa11.45□□□□□ -0.58
CKS1B-205ENST00000473344 HSPA2P54652 639 aa11.45□□□□□ -0.58
CKS1B-205ENST00000473344 CDK13Q14004 1512 aaKnown RBP11.45□□□□□ -0.58
CKS1B-205ENST00000473344 PLCH2O75038 1416 aa11.44□□□□□ -0.58
CKS1B-205ENST00000473344 SCAPERQ9BY12 1400 aa11.44□□□□□ -0.58
CKS1B-205ENST00000473344 FMN1Q68DA7 1419 aa11.43□□□□□ -0.58
CKS1B-205ENST00000473344 EFCAB2Q5VUJ9 269 aa11.43□□□□□ -0.58
CKS1B-205ENST00000473344 HECW1Q76N89 1606 aa11.42□□□□□ -0.58
CKS1B-205ENST00000473344 MYT1LQ9UL68 1186 aa11.42□□□□□ -0.58
CKS1B-205ENST00000473344 ATP10AO60312 1499 aa11.39□□□□□ -0.59
CKS1B-205ENST00000473344 CLIP1P30622 1438 aa11.39□□□□□ -0.59
CKS1B-205ENST00000473344 C9orf84Q5VXU9 1444 aa11.39□□□□□ -0.59
CKS1B-205ENST00000473344 FER1L4A9Z1Z3 1794 aa11.38□□□□□ -0.59
CKS1B-205ENST00000473344 ZNF518AQ6AHZ1 1483 aa11.38□□□□□ -0.59
CKS1B-205ENST00000473344 ARHGAP5Q13017 1502 aa11.37□□□□□ -0.59
CKS1B-205ENST00000473344 CERKQ8TCT0 537 aa11.37□□□□□ -0.59
CKS1B-205ENST00000473344 KIF14Q15058 1648 aa11.37□□□□□ -0.59
CKS1B-205ENST00000473344 SIGLEC1Q9BZZ2 1709 aa11.37□□□□□ -0.59
CKS1B-205ENST00000473344 MYO5CQ9NQX4 1742 aa11.37□□□□□ -0.59
CKS1B-205ENST00000473344 CHRDL2Q6WN34 429 aa11.36□□□□□ -0.59
CKS1B-205ENST00000473344 AFAP1Q8N556 730 aa11.36□□□□□ -0.59
CKS1B-205ENST00000473344 ARHGAP35Q9NRY4 1499 aa11.36□□□□□ -0.59
CKS1B-205ENST00000473344 TROQ12816 1431 aaPredicted RBP11.35□□□□□ -0.59
CKS1B-205ENST00000473344 ARHGEF12Q9NZN5 1544 aa11.35□□□□□ -0.59
CKS1B-205ENST00000473344 CEBPAP49715 358 aaPredicted RBP11.35□□□□□ -0.59
CKS1B-205ENST00000473344 ESF1Q9H501 851 aaKnown RBP11.35□□□□□ -0.59
CKS1B-205ENST00000473344 UHRF1BP1Q6BDS2 1440 aa11.33□□□□□ -0.6
CKS1B-205ENST00000473344 AKT1S1Q96B36 256 aa11.32□□□□□ -0.6
CKS1B-205ENST00000473344 PREX1Q8TCU6 1659 aa11.32□□□□□ -0.6
CKS1B-205ENST00000473344 KDM5CP41229 1560 aa11.31□□□□□ -0.6
CKS1B-205ENST00000473344 CCDC18Q5T9S5 1454 aa11.29□□□□□ -0.6
CKS1B-205ENST00000473344 MLH3Q9UHC1 1453 aa11.29□□□□□ -0.6
CKS1B-205ENST00000473344 DIP2CQ9Y2E4 1556 aa11.28□□□□□ -0.6
CKS1B-205ENST00000473344 ATF5Q9Y2D1 282 aaPredicted RBP11.28□□□□□ -0.6
CKS1B-205ENST00000473344 REREQ9P2R6 1566 aa11.28□□□□□ -0.6
CKS1B-205ENST00000473344 ZNF777Q9ULD5 760 aaPredicted RBP11.26□□□□□ -0.61
CKS1B-205ENST00000473344 ABCA6Q8N139 1617 aa11.26□□□□□ -0.61
CKS1B-205ENST00000473344 CASKIN1Q8WXD9 1431 aa11.26□□□□□ -0.61
CKS1B-205ENST00000473344 TRAPPC8Q9Y2L5 1435 aa11.26□□□□□ -0.61
CKS1B-205ENST00000473344 ABCC1P33527 1531 aa11.25□□□□□ -0.61
CKS1B-205ENST00000473344 PREX2Q70Z35 1606 aa11.25□□□□□ -0.61
CKS1B-205ENST00000473344 AGLP35573 1532 aa11.25□□□□□ -0.61
CKS1B-205ENST00000473344 CDC42BPBQ9Y5S2 1711 aa11.24□□□□□ -0.61
CKS1B-205ENST00000473344 ATXN8OSP0DMR3 200 aa11.24□□□□□ -0.61
CKS1B-205ENST00000473344 CNTLNQ9NXG0 1405 aa11.24□□□□□ -0.61
CKS1B-205ENST00000473344 LRRIQ1Q96JM4 1722 aa11.23□□□□□ -0.61
CKS1B-205ENST00000473344 C3P01024 1663 aa11.23□□□□□ -0.61
CKS1B-205ENST00000473344 PTPRTO14522 1441 aa11.22□□□□□ -0.61
CKS1B-205ENST00000473344 SPAG9O60271 1321 aaKnown RBP11.22□□□□□ -0.61
CKS1B-205ENST00000473344 STRCQ7RTU9 1775 aa11.22□□□□□ -0.61
CKS1B-205ENST00000473344 ITSN2Q9NZM3 1697 aa11.22□□□□□ -0.61
CKS1B-205ENST00000473344 DISP3Q9P2K9 1392 aa11.22□□□□□ -0.61
CKS1B-205ENST00000473344 FYCO1Q9BQS8 1478 aa11.21□□□□□ -0.61
CKS1B-205ENST00000473344 HNRNPMP52272 730 aaKnown RBP eCLIP11.2□□□□□ -0.62
CKS1B-205ENST00000473344 KIDINS220Q9ULH0 1771 aa11.19□□□□□ -0.62
CKS1B-205ENST00000473344 CFDP1Q9UEE9 299 aaPredicted RBP11.19□□□□□ -0.62
CKS1B-205ENST00000473344 SAMD9LQ8IVG5 1584 aa11.19□□□□□ -0.62
CKS1B-205ENST00000473344 SYCP2Q9BX26 1530 aa11.19□□□□□ -0.62
CKS1B-205ENST00000473344 CDC42BPAQ5VT25 1732 aa11.18□□□□□ -0.62
CKS1B-205ENST00000473344 ZMYM3Q14202 1370 aa11.18□□□□□ -0.62
CKS1B-205ENST00000473344 GPATCH8Q9UKJ3 1502 aaKnown RBP11.18□□□□□ -0.62
CKS1B-205ENST00000473344 NPATQ14207 1427 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms