RNA–Protein interactions for RNA: ENST00000473333.1

GTF2I-206, Transcript of general transcription factor IIi, humanhuman

TSL 3

Gene GTF2I, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2I-206ENST00000473333 ZNF710Q8N1W2 664 aa14.51□□□□□ -0.09
GTF2I-206ENST00000473333 HS3ST6Q96QI5 342 aa14.5□□□□□ -0.09
GTF2I-206ENST00000473333 DOK7Q18PE1 504 aa14.49□□□□□ -0.09
GTF2I-206ENST00000473333 HOXB1P14653 301 aaPredicted RBP14.46□□□□□ -0.09
GTF2I-206ENST00000473333 SPNS2Q8IVW8 549 aa14.42□□□□□ -0.1
GTF2I-206ENST00000473333 RIMBP2O15034 1052 aa14.39□□□□□ -0.11
GTF2I-206ENST00000473333 KRTAP3-3Q9BYR6 98 aa14.39□□□□□ -0.11
GTF2I-206ENST00000473333 KRTAP3-2Q9BYR7 98 aa14.39□□□□□ -0.11
GTF2I-206ENST00000473333 ERBB3P21860 1342 aa14.37□□□□□ -0.11
GTF2I-206ENST00000473333 PPP1R37O75864 691 aa14.35□□□□□ -0.11
GTF2I-206ENST00000473333 MMRN1Q13201 1228 aa14.34□□□□□ -0.11
GTF2I-206ENST00000473333 GPR153Q6NV75 609 aa14.34□□□□□ -0.11
GTF2I-206ENST00000473333 C2orf72A6NCS6 295 aa14.32□□□□□ -0.12
GTF2I-206ENST00000473333 ZSWIM6Q9HCJ5 1215 aa14.32□□□□□ -0.12
GTF2I-206ENST00000473333 ARSIQ5FYB1 569 aa14.31□□□□□ -0.12
GTF2I-206ENST00000473333 KIF3CO14782 793 aa14.3□□□□□ -0.12
GTF2I-206ENST00000473333 VARS2Q5ST30 1063 aaKnown RBP14.29□□□□□ -0.12
GTF2I-206ENST00000473333 KHSRPQ92945 711 aaKnown RBP eCLIP14.29□□□□□ -0.12
GTF2I-206ENST00000473333 HS6ST3Q8IZP7 471 aa14.28□□□□□ -0.12
GTF2I-206ENST00000473333 CHGAP10645 457 aaKnown RBP14.25□□□□□ -0.13
GTF2I-206ENST00000473333 TMC2Q8TDI7 906 aa14.21□□□□□ -0.13
GTF2I-206ENST00000473333 ZNF687Q8N1G0 1237 aa14.16□□□□□ -0.14
GTF2I-206ENST00000473333 NKX1-1Q15270 411 aaPredicted RBP14.15□□□□□ -0.14
GTF2I-206ENST00000473333 ZNF316A6NFI3 1004 aaPredicted RBP14.14□□□□□ -0.15
GTF2I-206ENST00000473333 NUDT7P0C024 238 aa14.13□□□□□ -0.15
GTF2I-206ENST00000473333 ABCC9O60706 1549 aa14.12□□□□□ -0.15
GTF2I-206ENST00000473333 SLC34A2O95436 690 aa14.11□□□□□ -0.15
GTF2I-206ENST00000473333 PCDHGA4Q9Y5G9 962 aa14.11□□□□□ -0.15
GTF2I-206ENST00000473333 CCDC180Q9P1Z9 1646 aa14.09□□□□□ -0.15
GTF2I-206ENST00000473333 DNAJC5Q9H3Z4 198 aa14.07□□□□□ -0.16
GTF2I-206ENST00000473333 LHX6Q9UPM6 363 aa14.05□□□□□ -0.16
GTF2I-206ENST00000473333 GPHNQ9NQX3 736 aaPredicted RBP14.04□□□□□ -0.16
GTF2I-206ENST00000473333 PLPP6Q8IY26 295 aa14.03□□□□□ -0.16
GTF2I-206ENST00000473333 FOXK1P85037 733 aa14.02□□□□□ -0.17
GTF2I-206ENST00000473333 DSG2Q14126 1118 aa14.01□□□□□ -0.17
GTF2I-206ENST00000473333 ANKRD13DQ6ZTN6 518 aa14.01□□□□□ -0.17
GTF2I-206ENST00000473333 PTCD2Q8WV60 388 aaKnown RBP13.98□□□□□ -0.17
GTF2I-206ENST00000473333 POTEEQ6S8J3 1075 aa13.97□□□□□ -0.17
GTF2I-206ENST00000473333 AXIN2Q9Y2T1 843 aa13.96□□□□□ -0.17
GTF2I-206ENST00000473333 KDM4FA0A1W2PPD8 638 aa13.95□□□□□ -0.18
GTF2I-206ENST00000473333 DCAF8L2P0C7V8 631 aa13.95□□□□□ -0.18
GTF2I-206ENST00000473333 RNF166Q96A37 237 aaPredicted RBP13.95□□□□□ -0.18
GTF2I-206ENST00000473333 MYT1LQ9UL68 1186 aa13.95□□□□□ -0.18
GTF2I-206ENST00000473333 LSM11P83369 360 aaKnown RBP eCLIP13.93□□□□□ -0.18
GTF2I-206ENST00000473333 RYDENQ9NUL5 291 aaKnown RBP13.93□□□□□ -0.18
GTF2I-206ENST00000473333 GTPBP6O43824 516 aaPredicted RBP13.92□□□□□ -0.18
GTF2I-206ENST00000473333 CRISPLD2Q9H0B8 497 aa13.89□□□□□ -0.19
GTF2I-206ENST00000473333 PBX2P40425 430 aa13.87□□□□□ -0.19
GTF2I-206ENST00000473333 NCKAP5LQ9HCH0 1330 aa13.86□□□□□ -0.19
GTF2I-206ENST00000473333 TBC1D12O60347 775 aa13.85□□□□□ -0.19
GTF2I-206ENST00000473333 UPF1Q92900 1129 aaKnown RBP eCLIP13.85□□□□□ -0.19
GTF2I-206ENST00000473333 PTGER2P43116 358 aa13.83□□□□□ -0.2
GTF2I-206ENST00000473333 PSDA5PKW4 1024 aaPredicted RBP13.82□□□□□ -0.2
GTF2I-206ENST00000473333 PPP1R15BQ5SWA1 713 aa13.82□□□□□ -0.2
GTF2I-206ENST00000473333 OXER1Q8TDS5 423 aa13.82□□□□□ -0.2
GTF2I-206ENST00000473333 ARHGAP33O14559 1287 aa13.8□□□□□ -0.2
GTF2I-206ENST00000473333 PDE4AP27815 886 aa13.8□□□□□ -0.2
GTF2I-206ENST00000473333 PSEN2P49810 448 aa13.78□□□□□ -0.2
GTF2I-206ENST00000473333 DMRTA1Q5VZB9 504 aa13.77□□□□□ -0.21
GTF2I-206ENST00000473333 LARP6Q9BRS8 491 aaKnown RBP13.77□□□□□ -0.21
GTF2I-206ENST00000473333 PPP4R3BQ5MIZ7 849 aa13.76□□□□□ -0.21
GTF2I-206ENST00000473333 ADGRD1Q6QNK2 874 aa13.74□□□□□ -0.21
GTF2I-206ENST00000473333 CADPS2Q86UW7 1296 aa13.71□□□□□ -0.21
GTF2I-206ENST00000473333 DDX27Q96GQ7 796 aaKnown RBP13.71□□□□□ -0.21
GTF2I-206ENST00000473333 ZNF454Q8N9F8 522 aa13.68□□□□□ -0.22
GTF2I-206ENST00000473333 KCNK17Q96T54 332 aa13.68□□□□□ -0.22
GTF2I-206ENST00000473333 MFSD10Q14728 455 aa13.66□□□□□ -0.22
GTF2I-206ENST00000473333 TK2O00142 265 aa13.65□□□□□ -0.22
GTF2I-206ENST00000473333 HRO43593 1189 aa13.65□□□□□ -0.22
GTF2I-206ENST00000473333 EVI5O60447 810 aa13.64□□□□□ -0.23
GTF2I-206ENST00000473333 ANO8Q9HCE9 1232 aaPredicted RBP13.64□□□□□ -0.23
GTF2I-206ENST00000473333 FOSBP53539 338 aa13.63□□□□□ -0.23
GTF2I-206ENST00000473333 EMILIN3Q9NT22 766 aa13.63□□□□□ -0.23
GTF2I-206ENST00000473333 MAP3K9P80192 1104 aa13.61□□□□□ -0.23
GTF2I-206ENST00000473333 BCL2L12Q9HB09 334 aa13.59□□□□□ -0.23
GTF2I-206ENST00000473333 KCNH8Q96L42 1107 aa13.58□□□□□ -0.24
GTF2I-206ENST00000473333 VPS9D1Q9Y2B5 631 aa13.56□□□□□ -0.24
GTF2I-206ENST00000473333 BBXQ8WY36 941 aaPredicted RBP13.55□□□□□ -0.24
GTF2I-206ENST00000473333 JPH4Q96JJ6 628 aa13.55□□□□□ -0.24
GTF2I-206ENST00000473333 STAC3Q96MF2 364 aa13.54□□□□□ -0.24
GTF2I-206ENST00000473333 ADAM33Q9BZ11 813 aa13.54□□□□□ -0.24
GTF2I-206ENST00000473333 HCSTQ9UBK5 93 aa13.54□□□□□ -0.24
GTF2I-206ENST00000473333 ZDHHC16Q969W1 377 aa13.53□□□□□ -0.24
GTF2I-206ENST00000473333 PTPREP23469 700 aa13.52□□□□□ -0.25
GTF2I-206ENST00000473333 KCTD12Q96CX2 325 aaKnown RBP13.52□□□□□ -0.25
GTF2I-206ENST00000473333 ZBED2Q9BTP6 218 aa13.48□□□□□ -0.25
GTF2I-206ENST00000473333 SLC4A5Q9BY07 1137 aa13.48□□□□□ -0.25
GTF2I-206ENST00000473333 PCDHGA10Q9Y5H3 936 aa13.48□□□□□ -0.25
GTF2I-206ENST00000473333 CAMK2BQ13554 666 aa13.47□□□□□ -0.25
GTF2I-206ENST00000473333 RTN4Q9NQC3 1192 aaKnown RBP13.47□□□□□ -0.25
GTF2I-206ENST00000473333 PLA2G2EQ9NZK7 142 aa13.45□□□□□ -0.26
GTF2I-206ENST00000473333 BHMG1C9JSJ3 638 aaPredicted RBP13.44□□□□□ -0.26
GTF2I-206ENST00000473333 DPYSL4O14531 572 aa13.44□□□□□ -0.26
GTF2I-206ENST00000473333 AMER1Q5JTC6 1135 aaPredicted RBP13.44□□□□□ -0.26
GTF2I-206ENST00000473333 SPRYD3Q8NCJ5 442 aa13.43□□□□□ -0.26
GTF2I-206ENST00000473333 RB1CC1Q8TDY2 1594 aa13.41□□□□□ -0.26
GTF2I-206ENST00000473333 COL9A1P20849 921 aa13.4□□□□□ -0.26
GTF2I-206ENST00000473333 PTPN5P54829 565 aa13.4□□□□□ -0.26
GTF2I-206ENST00000473333 PHF14O94880 888 aa13.39□□□□□ -0.27
GTF2I-206ENST00000473333 TYW1BQ6NUM6 668 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms