RNA–Protein interactions for RNA: ENST00000473146.5

SLC6A20-206, Transcript of solute carrier family 6 member 20, humanhuman

TSL 1 (best)

Gene SLC6A20, Length 2,441 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A20-206ENST00000473146 CFDP1Q9UEE9 299 aaPredicted RBP18.88■□□□□ 0.61
SLC6A20-206ENST00000473146 RAB3GAP2Q9H2M9 1393 aa18.84■□□□□ 0.61
SLC6A20-206ENST00000473146 SETD5Q9C0A6 1442 aa18.84■□□□□ 0.61
SLC6A20-206ENST00000473146 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.83■□□□□ 0.61
SLC6A20-206ENST00000473146 CAMSAP2Q08AD1 1489 aa18.83■□□□□ 0.6
SLC6A20-206ENST00000473146 KCNH8Q96L42 1107 aa18.83■□□□□ 0.6
SLC6A20-206ENST00000473146 TTC37Q6PGP7 1564 aa18.83■□□□□ 0.6
SLC6A20-206ENST00000473146 ZNF777Q9ULD5 760 aaPredicted RBP18.82■□□□□ 0.6
SLC6A20-206ENST00000473146 DNMT1P26358 1616 aaKnown RBP18.8■□□□□ 0.6
SLC6A20-206ENST00000473146 CDC42BPBQ9Y5S2 1711 aa18.79■□□□□ 0.6
SLC6A20-206ENST00000473146 PREX2Q70Z35 1606 aa18.79■□□□□ 0.6
SLC6A20-206ENST00000473146 DAPK1P53355 1430 aa18.79■□□□□ 0.6
SLC6A20-206ENST00000473146 CHIC2Q9UKJ5 165 aa18.79■□□□□ 0.6
SLC6A20-206ENST00000473146 HFM1A2PYH4 1435 aa18.78■□□□□ 0.6
SLC6A20-206ENST00000473146 ABCC5O15440 1437 aa18.78■□□□□ 0.6
SLC6A20-206ENST00000473146 WDR7Q9Y4E6 1490 aa18.78■□□□□ 0.6
SLC6A20-206ENST00000473146 RIMBP3CA6NJZ7 1639 aa18.77■□□□□ 0.6
SLC6A20-206ENST00000473146 RIMBP3BA6NNM3 1639 aa18.77■□□□□ 0.6
SLC6A20-206ENST00000473146 RIMBP3Q9UFD9 1639 aa18.77■□□□□ 0.6
SLC6A20-206ENST00000473146 DHX57Q6P158 1386 aaKnown RBP18.77■□□□□ 0.6
SLC6A20-206ENST00000473146 NAIPQ13075 1403 aa18.76■□□□□ 0.59
SLC6A20-206ENST00000473146 MYO5CQ9NQX4 1742 aa18.75■□□□□ 0.59
SLC6A20-206ENST00000473146 ASXL2Q76L83 1435 aa18.75■□□□□ 0.59
SLC6A20-206ENST00000473146 NPM1P06748 294 aaKnown RBP eCLIP18.74■□□□□ 0.59
SLC6A20-206ENST00000473146 RRP7BPQ9NSQ0 103 aa18.73■□□□□ 0.59
SLC6A20-206ENST00000473146 SAMD9LQ8IVG5 1584 aa18.72■□□□□ 0.59
SLC6A20-206ENST00000473146 CYB5RLQ6IPT4 315 aa18.72■□□□□ 0.59
SLC6A20-206ENST00000473146 ARHGAP5Q13017 1502 aa18.72■□□□□ 0.59
SLC6A20-206ENST00000473146 AKNAQ7Z591 1439 aa18.71■□□□□ 0.59
SLC6A20-206ENST00000473146 PLCH2O75038 1416 aa18.7■□□□□ 0.58
SLC6A20-206ENST00000473146 CROCC2H7BZ55 1655 aa18.7■□□□□ 0.58
SLC6A20-206ENST00000473146 GCC2Q8IWJ2 1684 aa18.69■□□□□ 0.58
SLC6A20-206ENST00000473146 ROCK1Q13464 1354 aa18.69■□□□□ 0.58
SLC6A20-206ENST00000473146 HNRNPMP52272 730 aaKnown RBP eCLIP18.68■□□□□ 0.58
SLC6A20-206ENST00000473146 MBD5Q9P267 1494 aa18.67■□□□□ 0.58
SLC6A20-206ENST00000473146 ABCA9Q8IUA7 1624 aa18.66■□□□□ 0.58
SLC6A20-206ENST00000473146 CLSPNQ9HAW4 1339 aa18.66■□□□□ 0.58
SLC6A20-206ENST00000473146 ARHGEF5Q12774 1597 aa18.66■□□□□ 0.58
SLC6A20-206ENST00000473146 KDM6BO15054 1643 aa18.65■□□□□ 0.58
SLC6A20-206ENST00000473146 SYCP2Q9BX26 1530 aa18.64■□□□□ 0.57
SLC6A20-206ENST00000473146 ADGBQ8N7X0 1667 aa18.64■□□□□ 0.57
SLC6A20-206ENST00000473146 NCOA1Q15788 1441 aa18.64■□□□□ 0.57
SLC6A20-206ENST00000473146 ADGRL2O95490 1459 aa18.63■□□□□ 0.57
SLC6A20-206ENST00000473146 SHANK2Q9UPX8 1470 aa18.62■□□□□ 0.57
SLC6A20-206ENST00000473146 EFCAB2Q5VUJ9 269 aa18.62■□□□□ 0.57
SLC6A20-206ENST00000473146 ARAP3Q8WWN8 1544 aa18.62■□□□□ 0.57
SLC6A20-206ENST00000473146 CCDC141Q6ZP82 1450 aa18.62■□□□□ 0.57
SLC6A20-206ENST00000473146 C9orf84Q5VXU9 1444 aa18.61■□□□□ 0.57
SLC6A20-206ENST00000473146 MAPKBP1O60336 1514 aa18.61■□□□□ 0.57
SLC6A20-206ENST00000473146 KIAA1107Q9UPP5 1409 aa18.61■□□□□ 0.57
SLC6A20-206ENST00000473146 PLEKHH2Q8IVE3 1493 aa18.61■□□□□ 0.57
SLC6A20-206ENST00000473146 TSPY4P0CV99 314 aa18.6■□□□□ 0.57
SLC6A20-206ENST00000473146 TSPY10P0CW01 314 aa18.6■□□□□ 0.57
SLC6A20-206ENST00000473146 ARHGEF12Q9NZN5 1544 aa18.6■□□□□ 0.57
SLC6A20-206ENST00000473146 RSPH4AQ5TD94 716 aa18.6■□□□□ 0.57
SLC6A20-206ENST00000473146 ANKRD30AQ9BXX3 1397 aa18.59■□□□□ 0.57
SLC6A20-206ENST00000473146 ABCC1P33527 1531 aa18.58■□□□□ 0.56
SLC6A20-206ENST00000473146 FANCAO15360 1455 aa18.57■□□□□ 0.56
SLC6A20-206ENST00000473146 MAST1Q9Y2H9 1570 aa18.52■□□□□ 0.56
SLC6A20-206ENST00000473146 TRIM52Q96A61 297 aa18.52■□□□□ 0.56
SLC6A20-206ENST00000473146 SUPT16HQ9Y5B9 1047 aaKnown RBP18.52■□□□□ 0.56
SLC6A20-206ENST00000473146 CD109Q6YHK3 1445 aa18.52■□□□□ 0.56
SLC6A20-206ENST00000473146 TRAPPC8Q9Y2L5 1435 aa18.52■□□□□ 0.56
SLC6A20-206ENST00000473146 KIF15Q9NS87 1388 aa18.51■□□□□ 0.55
SLC6A20-206ENST00000473146 ANKRD50Q9ULJ7 1429 aa18.51■□□□□ 0.55
SLC6A20-206ENST00000473146 ADGRL1O94910 1474 aa18.48■□□□□ 0.55
SLC6A20-206ENST00000473146 DENND4BO75064 1496 aaPredicted RBP18.48■□□□□ 0.55
SLC6A20-206ENST00000473146 AFAP1Q8N556 730 aa18.48■□□□□ 0.55
SLC6A20-206ENST00000473146 SCAPERQ9BY12 1400 aa18.46■□□□□ 0.55
SLC6A20-206ENST00000473146 PLXNC1O60486 1568 aa18.46■□□□□ 0.54
SLC6A20-206ENST00000473146 SIN3AQ96ST3 1273 aa18.45■□□□□ 0.54
SLC6A20-206ENST00000473146 MPHOSPH9Q99550 1183 aa18.45■□□□□ 0.54
SLC6A20-206ENST00000473146 MAP3K4Q9Y6R4 1608 aa18.44■□□□□ 0.54
SLC6A20-206ENST00000473146 GLI2P10070 1586 aa18.43■□□□□ 0.54
SLC6A20-206ENST00000473146 CFAP74Q9C0B2 1584 aa18.43■□□□□ 0.54
SLC6A20-206ENST00000473146 SPAG9O60271 1321 aaKnown RBP18.42■□□□□ 0.54
SLC6A20-206ENST00000473146 DIP2BQ9P265 1576 aa18.42■□□□□ 0.54
SLC6A20-206ENST00000473146 ZFYVE16Q7Z3T8 1539 aa18.41■□□□□ 0.54
SLC6A20-206ENST00000473146 PZPP20742 1482 aa18.41■□□□□ 0.54
SLC6A20-206ENST00000473146 RTEL1-TNFRSF6BF6WH68 1400 aa18.4■□□□□ 0.54
SLC6A20-206ENST00000473146 FAM69CQ0P6D2 419 aa18.4■□□□□ 0.54
SLC6A20-206ENST00000473146 SLC4A1APQ9BWU0 796 aaKnown RBP18.4■□□□□ 0.54
SLC6A20-206ENST00000473146 DUOX2Q9NRD8 1548 aa18.39■□□□□ 0.53
SLC6A20-206ENST00000473146 INO80Q9ULG1 1556 aaPredicted RBP18.38■□□□□ 0.53
SLC6A20-206ENST00000473146 FOXD1Q16676 465 aa18.38■□□□□ 0.53
SLC6A20-206ENST00000473146 NEO1Q92859 1461 aa18.38■□□□□ 0.53
SLC6A20-206ENST00000473146 ZNF518AQ6AHZ1 1483 aa18.37■□□□□ 0.53
SLC6A20-206ENST00000473146 ATP7AQ04656 1500 aa18.37■□□□□ 0.53
SLC6A20-206ENST00000473146 NUP155O75694 1391 aa18.37■□□□□ 0.53
SLC6A20-206ENST00000473146 POGZQ7Z3K3 1410 aa18.35■□□□□ 0.53
SLC6A20-206ENST00000473146 ERBINQ96RT1 1412 aa18.35■□□□□ 0.53
SLC6A20-206ENST00000473146 KDM5DQ9BY66 1539 aa18.34■□□□□ 0.53
SLC6A20-206ENST00000473146 KDM5CP41229 1560 aa18.33■□□□□ 0.52
SLC6A20-206ENST00000473146 KIDINS220Q9ULH0 1771 aa18.32■□□□□ 0.52
SLC6A20-206ENST00000473146 MYT1LQ9UL68 1186 aa18.32■□□□□ 0.52
SLC6A20-206ENST00000473146 UNC13BO14795 1591 aa18.31■□□□□ 0.52
SLC6A20-206ENST00000473146 TSPOAP1O95153 1857 aa18.31■□□□□ 0.52
SLC6A20-206ENST00000473146 ANKRD30BQ9BXX2 1392 aa18.31■□□□□ 0.52
SLC6A20-206ENST00000473146 TSHZ2Q9NRE2 1034 aa18.31■□□□□ 0.52
SLC6A20-206ENST00000473146 TIMELESSQ9UNS1 1208 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms