RNA–Protein interactions for RNA: ENST00000473007.7

UBE2D4-210, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 5

Gene UBE2D4, Length 478 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-210ENST00000473007 PDE4DQ08499 809 aa6.6□□□□□ -1.35
UBE2D4-210ENST00000473007 KRI1Q8N9T8 703 aaKnown RBP6.6□□□□□ -1.35
UBE2D4-210ENST00000473007 FAM212AQ96EL1 285 aa6.6□□□□□ -1.35
UBE2D4-210ENST00000473007 PDS5BQ9NTI5 1447 aa6.59□□□□□ -1.35
UBE2D4-210ENST00000473007 TRIM66O15016 1216 aa6.59□□□□□ -1.35
UBE2D4-210ENST00000473007 ABCB7O75027 752 aa6.59□□□□□ -1.35
UBE2D4-210ENST00000473007 IGSF3O75054 1194 aa6.59□□□□□ -1.35
UBE2D4-210ENST00000473007 RGS22Q8NE09 1264 aa6.59□□□□□ -1.35
UBE2D4-210ENST00000473007 ZNF316A6NFI3 1004 aaPredicted RBP6.58□□□□□ -1.36
UBE2D4-210ENST00000473007 A6NJR5 290 aa6.58□□□□□ -1.36
UBE2D4-210ENST00000473007 TRAK2O60296 914 aa6.58□□□□□ -1.36
UBE2D4-210ENST00000473007 CCDC88BA6NC98 1476 aa6.58□□□□□ -1.36
UBE2D4-210ENST00000473007 ILDR1Q86SU0 546 aaPredicted RBP6.57□□□□□ -1.36
UBE2D4-210ENST00000473007 FAM117AQ9C073 453 aa6.57□□□□□ -1.36
UBE2D4-210ENST00000473007 KIF21AQ7Z4S6 1674 aa6.57□□□□□ -1.36
UBE2D4-210ENST00000473007 ABCC8Q09428 1581 aa6.57□□□□□ -1.36
UBE2D4-210ENST00000473007 ONECUT3O60422 494 aaPredicted RBP6.55□□□□□ -1.36
UBE2D4-210ENST00000473007 MTMR7Q9Y216 660 aa6.55□□□□□ -1.36
UBE2D4-210ENST00000473007 THOC2Q8NI27 1593 aaKnown RBP6.55□□□□□ -1.36
UBE2D4-210ENST00000473007 TTBK1Q5TCY1 1321 aaPredicted RBP6.54□□□□□ -1.36
UBE2D4-210ENST00000473007 MYT1Q01538 1121 aa6.54□□□□□ -1.36
UBE2D4-210ENST00000473007 AEBP1Q8IUX7 1158 aa6.54□□□□□ -1.36
UBE2D4-210ENST00000473007 GPIHBP1Q8IV16 184 aa6.54□□□□□ -1.36
UBE2D4-210ENST00000473007 CLUAP1Q96AJ1 413 aa6.54□□□□□ -1.36
UBE2D4-210ENST00000473007 PLEKHG3A1L390 1219 aa6.53□□□□□ -1.36
UBE2D4-210ENST00000473007 RBM26Q5T8P6 1007 aaKnown RBP6.53□□□□□ -1.36
UBE2D4-210ENST00000473007 ARIH1Q9Y4X5 557 aaPredicted RBP6.53□□□□□ -1.36
UBE2D4-210ENST00000473007 WDR62O43379 1518 aa6.53□□□□□ -1.36
UBE2D4-210ENST00000473007 WDR97A6NE52 1622 aa6.53□□□□□ -1.36
UBE2D4-210ENST00000473007 TMCO4Q5TGY1 634 aa6.52□□□□□ -1.37
UBE2D4-210ENST00000473007 CEP164Q9UPV0 1460 aa6.52□□□□□ -1.37
UBE2D4-210ENST00000473007 PYGBP11216 843 aa6.51□□□□□ -1.37
UBE2D4-210ENST00000473007 DDRGK1Q96HY6 314 aa6.51□□□□□ -1.37
UBE2D4-210ENST00000473007 MFRPQ9BY79 579 aa6.51□□□□□ -1.37
UBE2D4-210ENST00000473007 FANCD2Q9BXW9 1451 aa6.51□□□□□ -1.37
UBE2D4-210ENST00000473007 NESP48681 1621 aa6.5□□□□□ -1.37
UBE2D4-210ENST00000473007 MRC2Q9UBG0 1479 aa6.5□□□□□ -1.37
UBE2D4-210ENST00000473007 MFAP1P55081 439 aaKnown RBP6.5□□□□□ -1.37
UBE2D4-210ENST00000473007 RASEFQ8IZ41 740 aa6.5□□□□□ -1.37
UBE2D4-210ENST00000473007 PPP1R37O75864 691 aa6.49□□□□□ -1.37
UBE2D4-210ENST00000473007 FOXD4L5Q5VV16 416 aaPredicted RBP6.49□□□□□ -1.37
UBE2D4-210ENST00000473007 FOXD4L4Q8WXT5 416 aaPredicted RBP6.49□□□□□ -1.37
UBE2D4-210ENST00000473007 GZF1Q9H116 711 aaPredicted RBP6.49□□□□□ -1.37
UBE2D4-210ENST00000473007 DNMBPQ6XZF7 1577 aa6.48□□□□□ -1.37
UBE2D4-210ENST00000473007 BIVM-ERCC5R4GMW8 1640 aa6.48□□□□□ -1.37
UBE2D4-210ENST00000473007 RBM25P49756 843 aaKnown RBP6.48□□□□□ -1.37
UBE2D4-210ENST00000473007 ZNF428Q96B54 188 aa6.48□□□□□ -1.37
UBE2D4-210ENST00000473007 HMGB1P09429 215 aaKnown RBP6.47□□□□□ -1.37
UBE2D4-210ENST00000473007 MNX1P50219 401 aaPredicted RBP6.47□□□□□ -1.37
UBE2D4-210ENST00000473007 SERPINA10Q9UK55 444 aa6.47□□□□□ -1.37
UBE2D4-210ENST00000473007 ZNF777Q9ULD5 760 aaPredicted RBP6.47□□□□□ -1.37
UBE2D4-210ENST00000473007 MLLT3P42568 568 aaPredicted RBP6.46□□□□□ -1.38
UBE2D4-210ENST00000473007 GOPCQ9HD26 462 aa6.46□□□□□ -1.38
UBE2D4-210ENST00000473007 CCDC97Q96F63 343 aaPredicted RBP6.45□□□□□ -1.38
UBE2D4-210ENST00000473007 LARP6Q9BRS8 491 aaKnown RBP6.45□□□□□ -1.38
UBE2D4-210ENST00000473007 TOP2BQ02880 1626 aa6.45□□□□□ -1.38
UBE2D4-210ENST00000473007 NCKAP5LQ9HCH0 1330 aa6.45□□□□□ -1.38
UBE2D4-210ENST00000473007 MFSD10Q14728 455 aa6.44□□□□□ -1.38
UBE2D4-210ENST00000473007 RETREG2Q8NC44 543 aa6.44□□□□□ -1.38
UBE2D4-210ENST00000473007 PDAP1Q13442 181 aaKnown RBP6.43□□□□□ -1.38
UBE2D4-210ENST00000473007 PROSER2Q86WR7 435 aaPredicted RBP6.43□□□□□ -1.38
UBE2D4-210ENST00000473007 FNBP4Q8N3X1 1017 aaPredicted RBP6.43□□□□□ -1.38
UBE2D4-210ENST00000473007 CREBZFQ9NS37 354 aa6.43□□□□□ -1.38
UBE2D4-210ENST00000473007 URB2Q14146 1524 aaKnown RBP6.43□□□□□ -1.38
UBE2D4-210ENST00000473007 TOPBP1Q92547 1522 aa6.43□□□□□ -1.38
UBE2D4-210ENST00000473007 E9PSI1 815 aa6.42□□□□□ -1.38
UBE2D4-210ENST00000473007 HSP90B1P14625 803 aaKnown RBP6.42□□□□□ -1.38
UBE2D4-210ENST00000473007 PDE4AP27815 886 aa6.42□□□□□ -1.38
UBE2D4-210ENST00000473007 CAMK2BQ13554 666 aa6.42□□□□□ -1.38
UBE2D4-210ENST00000473007 IRF5Q13568 498 aa6.42□□□□□ -1.38
UBE2D4-210ENST00000473007 MCM6Q14566 821 aa6.42□□□□□ -1.38
UBE2D4-210ENST00000473007 ZNF467Q7Z7K2 595 aaPredicted RBP6.42□□□□□ -1.38
UBE2D4-210ENST00000473007 TARBP1Q13395 1621 aaKnown RBP6.42□□□□□ -1.38
UBE2D4-210ENST00000473007 FBXO22Q8NEZ5 403 aa6.41□□□□□ -1.38
UBE2D4-210ENST00000473007 IFT140Q96RY7 1462 aa6.41□□□□□ -1.38
UBE2D4-210ENST00000473007 GPR37O15354 613 aa6.4□□□□□ -1.38
UBE2D4-210ENST00000473007 CDK11BP21127 795 aaKnown RBP6.4□□□□□ -1.38
UBE2D4-210ENST00000473007 AMHR2Q16671 573 aa6.4□□□□□ -1.38
UBE2D4-210ENST00000473007 PARP9Q8IXQ6 854 aa6.4□□□□□ -1.38
UBE2D4-210ENST00000473007 PUS7Q96PZ0 661 aaKnown RBP6.4□□□□□ -1.38
UBE2D4-210ENST00000473007 CDK11AQ9UQ88 783 aaPredicted RBP6.4□□□□□ -1.38
UBE2D4-210ENST00000473007 MINK1Q8N4C8 1332 aaPredicted RBP6.4□□□□□ -1.39
UBE2D4-210ENST00000473007 EIF5BO60841 1220 aaKnown RBP6.39□□□□□ -1.39
UBE2D4-210ENST00000473007 NLRP6P59044 892 aa6.39□□□□□ -1.39
UBE2D4-210ENST00000473007 PCMTD1Q96MG8 357 aaPredicted RBP6.39□□□□□ -1.39
UBE2D4-210ENST00000473007 CUX1P39880 1505 aa6.39□□□□□ -1.39
UBE2D4-210ENST00000473007 CACNB1Q02641 598 aaPredicted RBP6.38□□□□□ -1.39
UBE2D4-210ENST00000473007 FBXW7Q969H0 707 aa6.38□□□□□ -1.39
UBE2D4-210ENST00000473007 DDX27Q96GQ7 796 aaKnown RBP6.38□□□□□ -1.39
UBE2D4-210ENST00000473007 CRISPLD2Q9H0B8 497 aa6.38□□□□□ -1.39
UBE2D4-210ENST00000473007 WRNQ14191 1432 aaPredicted RBP eCLIP6.38□□□□□ -1.39
UBE2D4-210ENST00000473007 POLA1P09884 1462 aaPredicted RBP6.38□□□□□ -1.39
UBE2D4-210ENST00000473007 ABCA10Q8WWZ4 1543 aa6.37□□□□□ -1.39
UBE2D4-210ENST00000473007 CCDC102AQ96A19 550 aa6.37□□□□□ -1.39
UBE2D4-210ENST00000473007 POM121Q96HA1 1249 aa6.37□□□□□ -1.39
UBE2D4-210ENST00000473007 IRF6O14896 467 aa6.36□□□□□ -1.39
UBE2D4-210ENST00000473007 DSG3P32926 999 aa6.36□□□□□ -1.39
UBE2D4-210ENST00000473007 PLSCR2Q9NRY7 297 aa6.36□□□□□ -1.39
UBE2D4-210ENST00000473007 ABCA5Q8WWZ7 1642 aa6.36□□□□□ -1.39
UBE2D4-210ENST00000473007 SYNJ1O43426 1573 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms