RNA–Protein interactions for RNA: ENST00000472947.5

NMD3-206, Transcript of NMD3 ribosome export adaptor, humanhuman

TSL 1 (best) BASIC

Gene NMD3, Length 2,378 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NMD3-206ENST00000472947 GPATCH8Q9UKJ3 1502 aaKnown RBP15.86■□□□□ 0.13
NMD3-206ENST00000472947 YTHDC1Q96MU7 727 aaKnown RBP15.85■□□□□ 0.13
NMD3-206ENST00000472947 DENND4BO75064 1496 aaPredicted RBP15.82■□□□□ 0.12
NMD3-206ENST00000472947 CAMSAP2Q08AD1 1489 aa15.82■□□□□ 0.12
NMD3-206ENST00000472947 GCC2Q8IWJ2 1684 aa15.82■□□□□ 0.12
NMD3-206ENST00000472947 DNMT1P26358 1616 aaKnown RBP15.81■□□□□ 0.12
NMD3-206ENST00000472947 PPP1R15AO75807 674 aaPredicted RBP15.8■□□□□ 0.12
NMD3-206ENST00000472947 MPHOSPH9Q99550 1183 aa15.79■□□□□ 0.12
NMD3-206ENST00000472947 ADCY10Q96PN6 1610 aa15.78■□□□□ 0.12
NMD3-206ENST00000472947 CDC42BPAQ5VT25 1732 aa15.78■□□□□ 0.12
NMD3-206ENST00000472947 TONSLQ96HA7 1378 aa15.78■□□□□ 0.12
NMD3-206ENST00000472947 SHROOM2Q13796 1616 aa15.77■□□□□ 0.12
NMD3-206ENST00000472947 ABCC10Q5T3U5 1492 aa15.77■□□□□ 0.11
NMD3-206ENST00000472947 HNRNPMP52272 730 aaKnown RBP eCLIP15.77■□□□□ 0.11
NMD3-206ENST00000472947 KCNH8Q96L42 1107 aa15.76■□□□□ 0.11
NMD3-206ENST00000472947 ITSN2Q9NZM3 1697 aa15.76■□□□□ 0.11
NMD3-206ENST00000472947 AKNAQ7Z591 1439 aa15.75■□□□□ 0.11
NMD3-206ENST00000472947 SCAF1Q9H7N4 1312 aaKnown RBP15.74■□□□□ 0.11
NMD3-206ENST00000472947 ROCK1Q13464 1354 aa15.73■□□□□ 0.11
NMD3-206ENST00000472947 NCOA1Q15788 1441 aa15.72■□□□□ 0.11
NMD3-206ENST00000472947 SLC4A1APQ9BWU0 796 aaKnown RBP15.71■□□□□ 0.11
NMD3-206ENST00000472947 TIMELESSQ9UNS1 1208 aa15.71■□□□□ 0.11
NMD3-206ENST00000472947 CLASP1Q7Z460 1538 aa15.7■□□□□ 0.1
NMD3-206ENST00000472947 DDX10Q13206 875 aaKnown RBP15.7■□□□□ 0.1
NMD3-206ENST00000472947 ACIN1Q9UKV3 1341 aaKnown RBP15.69■□□□□ 0.1
NMD3-206ENST00000472947 KDM5BQ9UGL1 1544 aa15.68■□□□□ 0.1
NMD3-206ENST00000472947 CROCC2H7BZ55 1655 aa15.67■□□□□ 0.1
NMD3-206ENST00000472947 CDC42BPBQ9Y5S2 1711 aa15.67■□□□□ 0.1
NMD3-206ENST00000472947 ABCC2Q92887 1545 aa15.66■□□□□ 0.1
NMD3-206ENST00000472947 TTC37Q6PGP7 1564 aa15.66■□□□□ 0.1
NMD3-206ENST00000472947 L3MBTL2Q969R5 705 aa15.66■□□□□ 0.1
NMD3-206ENST00000472947 ADGBQ8N7X0 1667 aa15.65■□□□□ 0.1
NMD3-206ENST00000472947 C9orf84Q5VXU9 1444 aa15.65■□□□□ 0.1
NMD3-206ENST00000472947 ANKRD30AQ9BXX3 1397 aa15.65■□□□□ 0.1
NMD3-206ENST00000472947 TSPY4P0CV99 314 aa15.64■□□□□ 0.09
NMD3-206ENST00000472947 TSPY10P0CW01 314 aa15.64■□□□□ 0.09
NMD3-206ENST00000472947 SAMD9LQ8IVG5 1584 aa15.64■□□□□ 0.09
NMD3-206ENST00000472947 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.64■□□□□ 0.092e-7■■■□□ 19.1
NMD3-206ENST00000472947 ANKRD30BQ9BXX2 1392 aa15.64■□□□□ 0.09
NMD3-206ENST00000472947 PZPP20742 1482 aa15.63■□□□□ 0.09
NMD3-206ENST00000472947 CENPBP07199 599 aaPredicted RBP15.62■□□□□ 0.09
NMD3-206ENST00000472947 ANKRD50Q9ULJ7 1429 aa15.62■□□□□ 0.09
NMD3-206ENST00000472947 MBD5Q9P267 1494 aa15.62■□□□□ 0.09
NMD3-206ENST00000472947 ADGRL2O95490 1459 aa15.62■□□□□ 0.09
NMD3-206ENST00000472947 PKD2Q13563 968 aa15.61■□□□□ 0.09
NMD3-206ENST00000472947 ARHGAP5Q13017 1502 aa15.61■□□□□ 0.09
NMD3-206ENST00000472947 ZCCHC11Q5TAX3 1644 aaKnown RBP15.61■□□□□ 0.09
NMD3-206ENST00000472947 PREX2Q70Z35 1606 aa15.61■□□□□ 0.09
NMD3-206ENST00000472947 SYCP2Q9BX26 1530 aa15.59■□□□□ 0.09
NMD3-206ENST00000472947 KIF15Q9NS87 1388 aa15.59■□□□□ 0.09
NMD3-206ENST00000472947 NBPF8Q3BBV2 869 aa15.58■□□□□ 0.09
NMD3-206ENST00000472947 NUP155O75694 1391 aa15.58■□□□□ 0.08
NMD3-206ENST00000472947 GTF3C3Q9Y5Q9 886 aa15.55■□□□□ 0.08
NMD3-206ENST00000472947 RPRD2Q5VT52 1461 aaKnown RBP15.55■□□□□ 0.08
NMD3-206ENST00000472947 HSPA5P11021 654 aaKnown RBP15.55■□□□□ 0.08
NMD3-206ENST00000472947 CCDC141Q6ZP82 1450 aa15.55■□□□□ 0.08
NMD3-206ENST00000472947 ARHGEF12Q9NZN5 1544 aa15.54■□□□□ 0.08
NMD3-206ENST00000472947 SHANK2Q9UPX8 1470 aa15.54■□□□□ 0.08
NMD3-206ENST00000472947 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.54■□□□□ 0.081e-7■■■□□ 19.2
NMD3-206ENST00000472947 MYO5CQ9NQX4 1742 aa15.53■□□□□ 0.08
NMD3-206ENST00000472947 ARHGEF5Q12774 1597 aa15.53■□□□□ 0.08
NMD3-206ENST00000472947 ZNF326Q5BKZ1 582 aaKnown RBP15.53■□□□□ 0.08
NMD3-206ENST00000472947 KIAA1107Q9UPP5 1409 aa15.52■□□□□ 0.07
NMD3-206ENST00000472947 UHRF1BP1LA0JNW5 1464 aa15.51■□□□□ 0.07
NMD3-206ENST00000472947 TEX14Q8IWB6 1497 aa15.51■□□□□ 0.07
NMD3-206ENST00000472947 OSCARQ8IYS5 282 aa15.5■□□□□ 0.07
NMD3-206ENST00000472947 PLCH2O75038 1416 aa15.49■□□□□ 0.07
NMD3-206ENST00000472947 C11orf95C9JLR9 678 aaPredicted RBP15.48■□□□□ 0.07
NMD3-206ENST00000472947 AFAP1Q8N556 730 aa15.48■□□□□ 0.07
NMD3-206ENST00000472947 EFCAB2Q5VUJ9 269 aa15.48■□□□□ 0.07
NMD3-206ENST00000472947 TRAPPC8Q9Y2L5 1435 aa15.48■□□□□ 0.07
NMD3-206ENST00000472947 EIF4G2P78344 907 aaKnown RBP eCLIP15.47■□□□□ 0.07
NMD3-206ENST00000472947 WASHC2AQ641Q2 1341 aa15.46■□□□□ 0.07
NMD3-206ENST00000472947 PLEKHH2Q8IVE3 1493 aa15.46■□□□□ 0.07
NMD3-206ENST00000472947 RSPH4AQ5TD94 716 aa15.46■□□□□ 0.06
NMD3-206ENST00000472947 KDM2AQ9Y2K7 1162 aa15.46■□□□□ 0.06
NMD3-206ENST00000472947 WDR7Q9Y4E6 1490 aa15.43■□□□□ 0.06
NMD3-206ENST00000472947 FAM135AQ9P2D6 1515 aa15.42■□□□□ 0.06
NMD3-206ENST00000472947 ASXL2Q76L83 1435 aa15.4■□□□□ 0.06
NMD3-206ENST00000472947 ABCC1P33527 1531 aa15.4■□□□□ 0.06
NMD3-206ENST00000472947 ANP32CO43423 234 aa15.4■□□□□ 0.06
NMD3-206ENST00000472947 RGL3Q3MIN7 710 aa15.4■□□□□ 0.06
NMD3-206ENST00000472947 MYT1LQ9UL68 1186 aa15.39■□□□□ 0.05
NMD3-206ENST00000472947 KDM5DQ9BY66 1539 aa15.39■□□□□ 0.05
NMD3-206ENST00000472947 MAST1Q9Y2H9 1570 aa15.39■□□□□ 0.05
NMD3-206ENST00000472947 DCAF11Q8TEB1 546 aa15.39■□□□□ 0.05
NMD3-206ENST00000472947 SPAG9O60271 1321 aaKnown RBP15.38■□□□□ 0.05
NMD3-206ENST00000472947 FANCAO15360 1455 aa15.36■□□□□ 0.05
NMD3-206ENST00000472947 POLR3GLQ9BT43 218 aa15.36■□□□□ 0.05
NMD3-206ENST00000472947 CNGB1Q14028 1251 aaPredicted RBP15.35■□□□□ 0.05
NMD3-206ENST00000472947 PLXNC1O60486 1568 aa15.35■□□□□ 0.05
NMD3-206ENST00000472947 PLA2R1Q13018 1463 aa15.35■□□□□ 0.05
NMD3-206ENST00000472947 NPM1P06748 294 aaKnown RBP eCLIP15.34■□□□□ 0.05
NMD3-206ENST00000472947 SPATA31E1Q6ZUB1 1445 aa15.34■□□□□ 0.05
NMD3-206ENST00000472947 DUOX2Q9NRD8 1548 aa15.33■□□□□ 0.04
NMD3-206ENST00000472947 UNC13BO14795 1591 aa15.33■□□□□ 0.04
NMD3-206ENST00000472947 CCDC7Q96M83 1385 aa15.33■□□□□ 0.04
NMD3-206ENST00000472947 PELP1Q8IZL8 1130 aaKnown RBP15.33■□□□□ 0.04
NMD3-206ENST00000472947 SCAPERQ9BY12 1400 aa15.32■□□□□ 0.04
NMD3-206ENST00000472947 KIF7Q2M1P5 1343 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms