RNA–Protein interactions for RNA: ENST00000472577.1

PKD1-208, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 2

Gene PKD1, Length 1,140 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-208ENST00000472577 RIMS1Q86UR5 1692 aaKnown RBP27.46■■□□□ 1.99
PKD1-208ENST00000472577 ARID4BQ4LE39 1312 aaPredicted RBP27.45■■□□□ 1.99
PKD1-208ENST00000472577 YEATS2Q9ULM3 1422 aa27.41■■□□□ 1.98
PKD1-208ENST00000472577 LMTK3Q96Q04 1460 aa27.41■■□□□ 1.98
PKD1-208ENST00000472577 ZFYVE16Q7Z3T8 1539 aa27.4■■□□□ 1.98
PKD1-208ENST00000472577 VPS8Q8N3P4 1428 aa27.4■■□□□ 1.98
PKD1-208ENST00000472577 CCDC18Q5T9S5 1454 aa27.39■■□□□ 1.98
PKD1-208ENST00000472577 PLCH2O75038 1416 aa27.33■■□□□ 1.96
PKD1-208ENST00000472577 POGZQ7Z3K3 1410 aa27.33■■□□□ 1.96
PKD1-208ENST00000472577 KIF14Q15058 1648 aa27.31■■□□□ 1.96
PKD1-208ENST00000472577 CDK11AQ9UQ88 783 aaPredicted RBP27.3■■□□□ 1.96
PKD1-208ENST00000472577 SCAPERQ9BY12 1400 aa27.3■■□□□ 1.96
PKD1-208ENST00000472577 MAGI2Q86UL8 1455 aa27.3■■□□□ 1.96
PKD1-208ENST00000472577 MYO5CQ9NQX4 1742 aa27.3■■□□□ 1.96
PKD1-208ENST00000472577 TROQ12816 1431 aaPredicted RBP27.27■■□□□ 1.96
PKD1-208ENST00000472577 FER1L4A9Z1Z3 1794 aa27.25■■□□□ 1.95
PKD1-208ENST00000472577 PLPPR3Q6T4P5 718 aa27.23■■□□□ 1.95
PKD1-208ENST00000472577 FBXO41Q8TF61 875 aa27.23■■□□□ 1.95
PKD1-208ENST00000472577 HSPA2P54652 639 aa27.2■■□□□ 1.94
PKD1-208ENST00000472577 MLECQ14165 292 aa27.2■■□□□ 1.94
PKD1-208ENST00000472577 TIAM1Q13009 1591 aa27.18■■□□□ 1.94
PKD1-208ENST00000472577 ARHGEF12Q9NZN5 1544 aa27.18■■□□□ 1.94
PKD1-208ENST00000472577 ATP10AO60312 1499 aa27.17■■□□□ 1.94
PKD1-208ENST00000472577 C9orf84Q5VXU9 1444 aa27.16■■□□□ 1.94
PKD1-208ENST00000472577 ARHGAP5Q13017 1502 aa27.16■■□□□ 1.94
PKD1-208ENST00000472577 KDM5CP41229 1560 aa27.15■■□□□ 1.94
PKD1-208ENST00000472577 EFCAB2Q5VUJ9 269 aa27.14■■□□□ 1.94
PKD1-208ENST00000472577 MTUS2Q5JR59 1369 aa27.13■■□□□ 1.93
PKD1-208ENST00000472577 ZNF518AQ6AHZ1 1483 aa27.13■■□□□ 1.93
PKD1-208ENST00000472577 MAP3K1Q13233 1512 aa27.11■■□□□ 1.93
PKD1-208ENST00000472577 EHBP1L1Q8N3D4 1523 aa27.11■■□□□ 1.93
PKD1-208ENST00000472577 CDC42BPBQ9Y5S2 1711 aa27.1■■□□□ 1.93
PKD1-208ENST00000472577 DIP2CQ9Y2E4 1556 aa27.09■■□□□ 1.93
PKD1-208ENST00000472577 PREX2Q70Z35 1606 aa27.07■■□□□ 1.92
PKD1-208ENST00000472577 ABCA6Q8N139 1617 aa27.06■■□□□ 1.92
PKD1-208ENST00000472577 AFAP1Q8N556 730 aa27.06■■□□□ 1.92
PKD1-208ENST00000472577 LRRC9Q6ZRR7 1453 aa27.06■■□□□ 1.92
PKD1-208ENST00000472577 PREX1Q8TCU6 1659 aa27.05■■□□□ 1.92
PKD1-208ENST00000472577 ABCC1P33527 1531 aa27.03■■□□□ 1.92
PKD1-208ENST00000472577 KANK4Q5T7N3 995 aaPredicted RBP27.03■■□□□ 1.92
PKD1-208ENST00000472577 CEBPAP49715 358 aaPredicted RBP27.01■■□□□ 1.91
PKD1-208ENST00000472577 APLP2Q06481 763 aa27.01■■□□□ 1.91
PKD1-208ENST00000472577 REREQ9P2R6 1566 aa27.01■■□□□ 1.91
PKD1-208ENST00000472577 ITSN2Q9NZM3 1697 aa27■■□□□ 1.91
PKD1-208ENST00000472577 CDC42BPAQ5VT25 1732 aa26.99■■□□□ 1.91
PKD1-208ENST00000472577 TRAPPC8Q9Y2L5 1435 aa26.99■■□□□ 1.91
PKD1-208ENST00000472577 SUPT6HQ7KZ85 1726 aaKnown RBP26.98■■□□□ 1.91
PKD1-208ENST00000472577 MLH3Q9UHC1 1453 aa26.97■■□□□ 1.91
PKD1-208ENST00000472577 NCOA2Q15596 1464 aa26.96■■□□□ 1.91
PKD1-208ENST00000472577 GPATCH8Q9UKJ3 1502 aaKnown RBP26.95■■□□□ 1.91
PKD1-208ENST00000472577 CCNB3Q8WWL7 1395 aa26.93■■□□□ 1.9
PKD1-208ENST00000472577 C3P01024 1663 aa26.92■■□□□ 1.9
PKD1-208ENST00000472577 STRCQ7RTU9 1775 aa26.92■■□□□ 1.9
PKD1-208ENST00000472577 KIDINS220Q9ULH0 1771 aa26.92■■□□□ 1.9
PKD1-208ENST00000472577 MYT1LQ9UL68 1186 aa26.92■■□□□ 1.9
PKD1-208ENST00000472577 AGLP35573 1532 aa26.9■■□□□ 1.9
PKD1-208ENST00000472577 CERKQ8TCT0 537 aa26.88■■□□□ 1.89
PKD1-208ENST00000472577 UHRF1BP1Q6BDS2 1440 aa26.88■■□□□ 1.89
PKD1-208ENST00000472577 SAMD9LQ8IVG5 1584 aa26.88■■□□□ 1.89
PKD1-208ENST00000472577 SYCP2Q9BX26 1530 aa26.84■■□□□ 1.89
PKD1-208ENST00000472577 CFDP1Q9UEE9 299 aaPredicted RBP26.83■■□□□ 1.89
PKD1-208ENST00000472577 ZNF777Q9ULD5 760 aaPredicted RBP26.81■■□□□ 1.88
PKD1-208ENST00000472577 SETD1BQ9UPS6 1966 aaKnown RBP26.78■■□□□ 1.88
PKD1-208ENST00000472577 MYOM3Q5VTT5 1437 aa26.75■■□□□ 1.87
PKD1-208ENST00000472577 ZNF644Q9H582 1327 aaPredicted RBP26.74■■□□□ 1.87
PKD1-208ENST00000472577 INO80Q9ULG1 1556 aaPredicted RBP26.74■■□□□ 1.87
PKD1-208ENST00000472577 ATP7AQ04656 1500 aa26.72■■□□□ 1.87
PKD1-208ENST00000472577 PPARGC1BQ86YN6 1023 aaKnown RBP26.72■■□□□ 1.87
PKD1-208ENST00000472577 MROH2AA6NES4 1674 aa26.72■■□□□ 1.87
PKD1-208ENST00000472577 CNTLNQ9NXG0 1405 aa26.72■■□□□ 1.87
PKD1-208ENST00000472577 PLEKHH2Q8IVE3 1493 aa26.71■■□□□ 1.87
PKD1-208ENST00000472577 PLXNC1O60486 1568 aa26.71■■□□□ 1.87
PKD1-208ENST00000472577 HNRNPMP52272 730 aaKnown RBP eCLIP26.7■■□□□ 1.86
PKD1-208ENST00000472577 ESF1Q9H501 851 aaKnown RBP26.7■■□□□ 1.86
PKD1-208ENST00000472577 KIAA1107Q9UPP5 1409 aa26.7■■□□□ 1.86
PKD1-208ENST00000472577 CAMSAP2Q08AD1 1489 aa26.69■■□□□ 1.86
PKD1-208ENST00000472577 SPAG9O60271 1321 aaKnown RBP26.68■■□□□ 1.86
PKD1-208ENST00000472577 PTPRTO14522 1441 aa26.68■■□□□ 1.86
PKD1-208ENST00000472577 MIA2Q96PC5 1412 aa26.68■■□□□ 1.86
PKD1-208ENST00000472577 DMRT2Q9Y5R5 561 aa26.68■■□□□ 1.86
PKD1-208ENST00000472577 NCOA1Q15788 1441 aa26.66■■□□□ 1.86
PKD1-208ENST00000472577 CLTCQ00610 1675 aaKnown RBP26.66■■□□□ 1.86
PKD1-208ENST00000472577 MBD5Q9P267 1494 aa26.65■■□□□ 1.86
PKD1-208ENST00000472577 LTBP4Q8N2S1 1624 aa26.63■■□□□ 1.85
PKD1-208ENST00000472577 NPATQ14207 1427 aa26.63■■□□□ 1.85
PKD1-208ENST00000472577 FGD6Q6ZV73 1430 aa26.63■■□□□ 1.85
PKD1-208ENST00000472577 A2MP01023 1474 aa26.62■■□□□ 1.85
PKD1-208ENST00000472577 CAMSAP1Q5T5Y3 1602 aa26.61■■□□□ 1.85
PKD1-208ENST00000472577 PTPN23Q9H3S7 1636 aa26.61■■□□□ 1.85
PKD1-208ENST00000472577 ZMYM3Q14202 1370 aa26.6■■□□□ 1.85
PKD1-208ENST00000472577 MYO3AQ8NEV4 1616 aa26.6■■□□□ 1.85
PKD1-208ENST00000472577 ZNF142P52746 1687 aaPredicted RBP26.58■■□□□ 1.85
PKD1-208ENST00000472577 ADGBQ8N7X0 1667 aa26.57■■□□□ 1.84
PKD1-208ENST00000472577 TCOF1Q13428 1488 aaKnown RBP26.56■■□□□ 1.84
PKD1-208ENST00000472577 ARHGEF5Q12774 1597 aa26.56■■□□□ 1.84
PKD1-208ENST00000472577 CCDC141Q6ZP82 1450 aa26.55■■□□□ 1.84
PKD1-208ENST00000472577 PTPRKQ15262 1439 aa26.53■■□□□ 1.84
PKD1-208ENST00000472577 CEP170BQ9Y4F5 1589 aaPredicted RBP26.52■■□□□ 1.84
PKD1-208ENST00000472577 RSPH4AQ5TD94 716 aa26.5■■□□□ 1.83
PKD1-208ENST00000472577 GGT6Q6P531 493 aa26.49■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms