RNA–Protein interactions for RNA: ENST00000472564.1

LAMP1-203, Transcript of lysosomal associated membrane protein 1, humanhuman

TSL 2

Gene LAMP1, Length 5,242 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP1-203ENST00000472564 NAP1L5Q96NT1 182 aaPredicted RBP22.04■■□□□ 1.12
LAMP1-203ENST00000472564 PNNQ9H307 717 aaKnown RBP22.04■■□□□ 1.12
LAMP1-203ENST00000472564 TPRNQ4KMQ1 711 aa22.03■■□□□ 1.12
LAMP1-203ENST00000472564 ROCK2O75116 1388 aaKnown RBP22.02■■□□□ 1.12
LAMP1-203ENST00000472564 KANK1Q14678 1352 aa22.02■■□□□ 1.12
LAMP1-203ENST00000472564 RUSC2Q8N2Y8 1516 aa22.02■■□□□ 1.12
LAMP1-203ENST00000472564 HSCBQ8IWL3 235 aa22.01■■□□□ 1.11
LAMP1-203ENST00000472564 DNTTIP2Q5QJE6 756 aaKnown RBP22.01■■□□□ 1.11
LAMP1-203ENST00000472564 ERCC6Q03468 1493 aa22■■□□□ 1.11
LAMP1-203ENST00000472564 FHOD3Q2V2M9 1422 aa22■■□□□ 1.11
LAMP1-203ENST00000472564 SRPK2P78362 688 aaKnown RBP21.98■■□□□ 1.11
LAMP1-203ENST00000472564 ANKRD30AQ9BXX3 1397 aa21.98■■□□□ 1.11
LAMP1-203ENST00000472564 ARID4BQ4LE39 1312 aaPredicted RBP21.96■■□□□ 1.11
LAMP1-203ENST00000472564 NLRP13Q86W25 1043 aa21.96■■□□□ 1.11
LAMP1-203ENST00000472564 SAFB2Q14151 953 aaKnown RBP eCLIP21.95■■□□□ 1.11
LAMP1-203ENST00000472564 SPRYD3Q8NCJ5 442 aa21.95■■□□□ 1.11
LAMP1-203ENST00000472564 A0A0G2JS52 829 aa21.95■■□□□ 1.1
LAMP1-203ENST00000472564 IPO9Q96P70 1041 aaKnown RBP21.94■■□□□ 1.1
LAMP1-203ENST00000472564 ZRSR1Q15695 479 aaKnown RBP21.94■■□□□ 1.1
LAMP1-203ENST00000472564 L1TD1Q5T7N2 865 aaKnown RBP21.93■■□□□ 1.1
LAMP1-203ENST00000472564 PLCB2Q00722 1185 aa21.92■■□□□ 1.1
LAMP1-203ENST00000472564 CARMIL2Q6F5E8 1435 aa21.91■■□□□ 1.1
LAMP1-203ENST00000472564 PDE3BQ13370 1112 aa21.91■■□□□ 1.1
LAMP1-203ENST00000472564 U2AF1L5P0DN76 240 aaPredicted RBP21.9■■□□□ 1.1
LAMP1-203ENST00000472564 U2AF1Q01081 240 aaKnown RBP eCLIP21.9■■□□□ 1.1
LAMP1-203ENST00000472564 IPO8O15397 1037 aaKnown RBP21.88■■□□□ 1.09
LAMP1-203ENST00000472564 GOLGA2Q08379 1002 aa21.88■■□□□ 1.09
LAMP1-203ENST00000472564 PRKRIP1Q9H875 184 aaPredicted RBP21.88■■□□□ 1.09
LAMP1-203ENST00000472564 GGT6Q6P531 493 aa21.88■■□□□ 1.09
LAMP1-203ENST00000472564 SLKQ9H2G2 1235 aaPredicted RBP21.87■■□□□ 1.09
LAMP1-203ENST00000472564 RWDD1Q9H446 243 aaPredicted RBP21.87■■□□□ 1.09
LAMP1-203ENST00000472564 OS9Q13438 667 aaPredicted RBP21.87■■□□□ 1.09
LAMP1-203ENST00000472564 PDS5BQ9NTI5 1447 aa21.85■■□□□ 1.09
LAMP1-203ENST00000472564 CADPSQ9ULU8 1353 aa21.85■■□□□ 1.09
LAMP1-203ENST00000472564 HAP1P54257 671 aaPredicted RBP21.84■■□□□ 1.09
LAMP1-203ENST00000472564 STK26Q9P289 416 aa21.84■■□□□ 1.09
LAMP1-203ENST00000472564 EFCAB2Q5VUJ9 269 aa21.84■■□□□ 1.09
LAMP1-203ENST00000472564 KCNJ4P48050 445 aa21.83■■□□□ 1.09
LAMP1-203ENST00000472564 LMOD2Q6P5Q4 547 aa21.83■■□□□ 1.08
LAMP1-203ENST00000472564 ST20-MTHFSA0A0A6YYL1 179 aa21.82■■□□□ 1.08
LAMP1-203ENST00000472564 SOX12O15370 315 aa21.82■■□□□ 1.08
LAMP1-203ENST00000472564 HNRNPMP52272 730 aaKnown RBP eCLIP21.82■■□□□ 1.087e-7■■■■■ 35.7
LAMP1-203ENST00000472564 ITPRIPQ8IWB1 547 aa21.81■■□□□ 1.08
LAMP1-203ENST00000472564 CFAP44Q96MT7 982 aa21.8■■□□□ 1.08
LAMP1-203ENST00000472564 FGD1P98174 961 aa21.8■■□□□ 1.08
LAMP1-203ENST00000472564 ATAD2BQ9ULI0 1458 aa21.79■■□□□ 1.08
LAMP1-203ENST00000472564 HDGFL2Q7Z4V5 671 aaPredicted RBP21.79■■□□□ 1.08
LAMP1-203ENST00000472564 PMFBP1Q8TBY8 1022 aa21.79■■□□□ 1.08
LAMP1-203ENST00000472564 ZBED9Q6R2W3 1325 aa21.78■■□□□ 1.08
LAMP1-203ENST00000472564 KIF15Q9NS87 1388 aa21.78■■□□□ 1.08
LAMP1-203ENST00000472564 MYBBP1AQ9BQG0 1328 aaKnown RBP21.78■■□□□ 1.08
LAMP1-203ENST00000472564 CCDC18Q5T9S5 1454 aa21.78■■□□□ 1.08
LAMP1-203ENST00000472564 CCDC146Q8IYE0 955 aa21.77■■□□□ 1.08
LAMP1-203ENST00000472564 MCCP23508 829 aa21.77■■□□□ 1.08
LAMP1-203ENST00000472564 GZF1Q9H116 711 aaPredicted RBP21.77■■□□□ 1.08
LAMP1-203ENST00000472564 APBB1O00213 710 aa21.77■■□□□ 1.08
LAMP1-203ENST00000472564 CLUAP1Q96AJ1 413 aa21.76■■□□□ 1.07
LAMP1-203ENST00000472564 MSNP26038 577 aaKnown RBP21.75■■□□□ 1.07
LAMP1-203ENST00000472564 RSPH4AQ5TD94 716 aa21.75■■□□□ 1.07
LAMP1-203ENST00000472564 GBP4Q96PP9 640 aa21.75■■□□□ 1.07
LAMP1-203ENST00000472564 PHLDB1Q86UU1 1377 aa21.75■■□□□ 1.07
LAMP1-203ENST00000472564 CDK11BP21127 795 aaKnown RBP21.74■■□□□ 1.07
LAMP1-203ENST00000472564 GOLGA6L4A6NEF3 574 aa21.74■■□□□ 1.07
LAMP1-203ENST00000472564 EIF3AQ14152 1382 aaKnown RBP21.73■■□□□ 1.07
LAMP1-203ENST00000472564 CALD1Q05682 793 aaKnown RBP21.73■■□□□ 1.07
LAMP1-203ENST00000472564 HDGFP51858 240 aaKnown RBP21.73■■□□□ 1.07
LAMP1-203ENST00000472564 SMC4Q9NTJ3 1288 aa21.73■■□□□ 1.07
LAMP1-203ENST00000472564 CENPJQ9HC77 1338 aaPredicted RBP21.73■■□□□ 1.07
LAMP1-203ENST00000472564 KIF3BO15066 747 aa21.73■■□□□ 1.07
LAMP1-203ENST00000472564 MLECQ14165 292 aa21.73■■□□□ 1.07
LAMP1-203ENST00000472564 RTF1Q92541 710 aaKnown RBP21.72■■□□□ 1.07
LAMP1-203ENST00000472564 MFAP1P55081 439 aaKnown RBP21.71■■□□□ 1.07
LAMP1-203ENST00000472564 PANK3Q9H999 370 aa21.71■■□□□ 1.07
LAMP1-203ENST00000472564 SMARCA4P51532 1647 aa21.71■■□□□ 1.07
LAMP1-203ENST00000472564 PDE4AP27815 886 aa21.7■■□□□ 1.06
LAMP1-203ENST00000472564 EXOC6Q8TAG9 804 aa21.69■■□□□ 1.06
LAMP1-203ENST00000472564 TAOK2Q9UL54 1235 aa21.69■■□□□ 1.06
LAMP1-203ENST00000472564 NAP1L2Q9ULW6 460 aaPredicted RBP21.68■■□□□ 1.06
LAMP1-203ENST00000472564 PLIN1O60240 522 aa21.68■■□□□ 1.06
LAMP1-203ENST00000472564 RRP1P56182 461 aaKnown RBP21.68■■□□□ 1.06
LAMP1-203ENST00000472564 USP47Q96K76 1375 aa21.67■■□□□ 1.06
LAMP1-203ENST00000472564 FANCIQ9NVI1 1328 aa21.65■■□□□ 1.06
LAMP1-203ENST00000472564 PTMSP20962 102 aa21.65■■□□□ 1.06
LAMP1-203ENST00000472564 JPH4Q96JJ6 628 aa21.65■■□□□ 1.06
LAMP1-203ENST00000472564 CENPQQ7L2Z9 268 aaPredicted RBP21.64■■□□□ 1.06
LAMP1-203ENST00000472564 USP35Q9P2H5 1018 aa21.64■■□□□ 1.06
LAMP1-203ENST00000472564 GOLGA6L6A8MZA4 724 aa21.64■■□□□ 1.05
LAMP1-203ENST00000472564 SPAG9O60271 1321 aaKnown RBP21.64■■□□□ 1.05
LAMP1-203ENST00000472564 NRDCO43847 1150 aa21.63■■□□□ 1.05
LAMP1-203ENST00000472564 CCDC144AA2RUR9 1427 aa21.63■■□□□ 1.05
LAMP1-203ENST00000472564 TERF2IPQ9NYB0 399 aa21.63■■□□□ 1.05
LAMP1-203ENST00000472564 CHAF1AQ13111 956 aaPredicted RBP21.62■■□□□ 1.05
LAMP1-203ENST00000472564 GOLGA6L3A6NEY3 463 aa21.62■■□□□ 1.05
LAMP1-203ENST00000472564 KIAA1211Q6ZU35 1233 aa21.62■■□□□ 1.05
LAMP1-203ENST00000472564 IGF1RP08069 1367 aa21.61■■□□□ 1.05
LAMP1-203ENST00000472564 FAM161AQ3B820 660 aa21.6■■□□□ 1.05
LAMP1-203ENST00000472564 RRP7AQ9Y3A4 280 aaKnown RBP21.6■■□□□ 1.05
LAMP1-203ENST00000472564 CRBNQ96SW2 442 aa21.59■■□□□ 1.05
LAMP1-203ENST00000472564 SLC4A3P48751 1232 aa21.58■■□□□ 1.04
LAMP1-203ENST00000472564 TRAK1Q9UPV9 953 aa21.58■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms