RNA–Protein interactions for RNA: ENST00000472282.5

SMC4-213, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 667 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-213ENST00000472282 ABCA8O94911 1581 aa15.32■□□□□ 0.04
SMC4-213ENST00000472282 GOLGA3Q08378 1498 aa15.31■□□□□ 0.04
SMC4-213ENST00000472282 MAP3K4Q9Y6R4 1608 aa15.31■□□□□ 0.04
SMC4-213ENST00000472282 EPRSP07814 1512 aaKnown RBP15.28■□□□□ 0.04
SMC4-213ENST00000472282 SAMD9Q5K651 1589 aa15.28■□□□□ 0.04
SMC4-213ENST00000472282 PRKAR2AP13861 404 aaKnown RBP15.26■□□□□ 0.03
SMC4-213ENST00000472282 C19orf67A6NJJ6 358 aa15.25■□□□□ 0.03
SMC4-213ENST00000472282 GABBR2O75899 941 aa15.25■□□□□ 0.03
SMC4-213ENST00000472282 WDR7Q9Y4E6 1490 aa15.23■□□□□ 0.03
SMC4-213ENST00000472282 P3H3Q8IVL6 736 aa15.23■□□□□ 0.03
SMC4-213ENST00000472282 EEA1Q15075 1411 aa15.23■□□□□ 0.03
SMC4-213ENST00000472282 FAM9AQ8IZU1 332 aaPredicted RBP15.22■□□□□ 0.03
SMC4-213ENST00000472282 KIF21BO75037 1637 aa15.21■□□□□ 0.02
SMC4-213ENST00000472282 CFAP43Q8NDM7 1665 aa15.2■□□□□ 0.02
SMC4-213ENST00000472282 COL17A1Q9UMD9 1497 aaPredicted RBP15.2■□□□□ 0.02
SMC4-213ENST00000472282 RAPGEF6Q8TEU7 1601 aa15.19■□□□□ 0.02
SMC4-213ENST00000472282 PRR29P0C7W0 189 aa15.17■□□□□ 0.02
SMC4-213ENST00000472282 ARID3CA6NKF2 412 aa15.16■□□□□ 0.02
SMC4-213ENST00000472282 ATP10BO94823 1461 aa15.15■□□□□ 0.02
SMC4-213ENST00000472282 RANGAP1P46060 587 aaPredicted RBP15.14■□□□□ 0.01
SMC4-213ENST00000472282 TEX14Q8IWB6 1497 aa15.14■□□□□ 0.01
SMC4-213ENST00000472282 FHOD3Q2V2M9 1422 aa15.13■□□□□ 0.01
SMC4-213ENST00000472282 KCNH8Q96L42 1107 aa15.13■□□□□ 0.01
SMC4-213ENST00000472282 MAGI3Q5TCQ9 1506 aa15.11■□□□□ 0.01
SMC4-213ENST00000472282 CD109Q6YHK3 1445 aa15.1■□□□□ 0.01
SMC4-213ENST00000472282 NUP153P49790 1475 aaKnown RBP15.1■□□□□ 0.01
SMC4-213ENST00000472282 KDM4FA0A1W2PPD8 638 aa15.1■□□□□ 0.01
SMC4-213ENST00000472282 ABCA9Q8IUA7 1624 aa15.1■□□□□ 0.01
SMC4-213ENST00000472282 PLSCR2Q9NRY7 297 aa15.09■□□□□ 0.01
SMC4-213ENST00000472282 EFCAB5A4FU69 1503 aa15.07■□□□□ 0
SMC4-213ENST00000472282 CHADLQ6NUI6 762 aa15.03■□□□□ -0
SMC4-213ENST00000472282 ADGRL1O94910 1474 aa15.02■□□□□ -0
SMC4-213ENST00000472282 LRRIQ1Q96JM4 1722 aa15.01□□□□□ -0.01
SMC4-213ENST00000472282 CDK13Q14004 1512 aaKnown RBP15□□□□□ -0.01
SMC4-213ENST00000472282 ARHGAP35Q9NRY4 1499 aa15□□□□□ -0.01
SMC4-213ENST00000472282 POTEIP0CG38 1075 aa14.99□□□□□ -0.01
SMC4-213ENST00000472282 ARAP3Q8WWN8 1544 aa14.98□□□□□ -0.01
SMC4-213ENST00000472282 UBTFP17480 764 aaKnown RBP14.98□□□□□ -0.01
SMC4-213ENST00000472282 FRMPD1Q5SYB0 1578 aa14.97□□□□□ -0.01
SMC4-213ENST00000472282 TTC37Q6PGP7 1564 aa14.97□□□□□ -0.01
SMC4-213ENST00000472282 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.97□□□□□ -0.011e-7■■■□□ 17.3
SMC4-213ENST00000472282 STAG3Q9UJ98 1225 aa14.96□□□□□ -0.01
SMC4-213ENST00000472282 SPDYE4A6NLX3 237 aa14.94□□□□□ -0.02
SMC4-213ENST00000472282 HECW1Q76N89 1606 aa14.94□□□□□ -0.02
SMC4-213ENST00000472282 RICTORQ6R327 1708 aa14.93□□□□□ -0.02
SMC4-213ENST00000472282 NEO1Q92859 1461 aa14.93□□□□□ -0.02
SMC4-213ENST00000472282 PLEKHD1A6NEE1 506 aa14.91□□□□□ -0.02
SMC4-213ENST00000472282 KIF14Q15058 1648 aa14.89□□□□□ -0.03
SMC4-213ENST00000472282 RAPGEF3O95398 923 aa14.89□□□□□ -0.03
SMC4-213ENST00000472282 FMN1Q68DA7 1419 aa14.89□□□□□ -0.03
SMC4-213ENST00000472282 MYO5CQ9NQX4 1742 aa14.89□□□□□ -0.03
SMC4-213ENST00000472282 PHLDB1Q86UU1 1377 aa14.88□□□□□ -0.03
SMC4-213ENST00000472282 PCF11O94913 1555 aaKnown RBP14.88□□□□□ -0.03
SMC4-213ENST00000472282 CFAP74Q9C0B2 1584 aa14.88□□□□□ -0.03
SMC4-213ENST00000472282 FANCAO15360 1455 aa14.87□□□□□ -0.03
SMC4-213ENST00000472282 ATP1B4Q9UN42 357 aaPredicted RBP14.86□□□□□ -0.03
SMC4-213ENST00000472282 FARP1Q9Y4F1 1045 aaPredicted RBP14.86□□□□□ -0.03
SMC4-213ENST00000472282 SIGLEC1Q9BZZ2 1709 aa14.86□□□□□ -0.03
SMC4-213ENST00000472282 AKNAQ7Z591 1439 aa14.85□□□□□ -0.03
SMC4-213ENST00000472282 ADAMTSL3P82987 1691 aa14.85□□□□□ -0.03
SMC4-213ENST00000472282 BCORL1Q5H9F3 1711 aa14.83□□□□□ -0.03
SMC4-213ENST00000472282 ARHGEF40Q8TER5 1519 aa14.83□□□□□ -0.04
SMC4-213ENST00000472282 DENND4BO75064 1496 aaPredicted RBP14.82□□□□□ -0.04
SMC4-213ENST00000472282 HECW2Q9P2P5 1572 aa14.81□□□□□ -0.04
SMC4-213ENST00000472282 CDC42BPBQ9Y5S2 1711 aa14.81□□□□□ -0.04
SMC4-213ENST00000472282 ZMYM4Q5VZL5 1548 aa14.81□□□□□ -0.04
SMC4-213ENST00000472282 PLCH2O75038 1416 aa14.8□□□□□ -0.04
SMC4-213ENST00000472282 MADDQ8WXG6 1647 aa14.8□□□□□ -0.04
SMC4-213ENST00000472282 CD44P16070 742 aaKnown RBP14.79□□□□□ -0.04
SMC4-213ENST00000472282 TROQ12816 1431 aaPredicted RBP14.79□□□□□ -0.04
SMC4-213ENST00000472282 CASKIN1Q8WXD9 1431 aa14.78□□□□□ -0.04
SMC4-213ENST00000472282 YEATS2Q9ULM3 1422 aa14.77□□□□□ -0.04
SMC4-213ENST00000472282 CDC42BPAQ5VT25 1732 aa14.77□□□□□ -0.05
SMC4-213ENST00000472282 RIMS1Q86UR5 1692 aaKnown RBP14.76□□□□□ -0.05
SMC4-213ENST00000472282 PREX2Q70Z35 1606 aa14.76□□□□□ -0.05
SMC4-213ENST00000472282 ZFYVE16Q7Z3T8 1539 aa14.76□□□□□ -0.05
SMC4-213ENST00000472282 SCAPERQ9BY12 1400 aa14.75□□□□□ -0.05
SMC4-213ENST00000472282 CLIP1P30622 1438 aa14.75□□□□□ -0.05
SMC4-213ENST00000472282 POGZQ7Z3K3 1410 aa14.75□□□□□ -0.05
SMC4-213ENST00000472282 ARHGAP5Q13017 1502 aa14.74□□□□□ -0.05
SMC4-213ENST00000472282 PTPRMP28827 1452 aa14.74□□□□□ -0.05
SMC4-213ENST00000472282 CCDC18Q5T9S5 1454 aa14.74□□□□□ -0.05
SMC4-213ENST00000472282 LOC105371045A0A1W2PR82 267 aa14.73□□□□□ -0.05
SMC4-213ENST00000472282 CDK11AQ9UQ88 783 aaPredicted RBP14.73□□□□□ -0.05
SMC4-213ENST00000472282 FYCO1Q9BQS8 1478 aa14.73□□□□□ -0.05
SMC4-213ENST00000472282 CLCN6P51797 869 aa14.72□□□□□ -0.05
SMC4-213ENST00000472282 ITSN2Q9NZM3 1697 aa14.71□□□□□ -0.05
SMC4-213ENST00000472282 FER1L4A9Z1Z3 1794 aa14.7□□□□□ -0.06
SMC4-213ENST00000472282 ARID4BQ4LE39 1312 aaPredicted RBP14.7□□□□□ -0.06
SMC4-213ENST00000472282 CREBZFQ9NS37 354 aa14.7□□□□□ -0.06
SMC4-213ENST00000472282 MAGI2Q86UL8 1455 aa14.69□□□□□ -0.06
SMC4-213ENST00000472282 KDM5CP41229 1560 aa14.69□□□□□ -0.06
SMC4-213ENST00000472282 EFCAB2Q5VUJ9 269 aa14.69□□□□□ -0.06
SMC4-213ENST00000472282 CEP162Q5TB80 1403 aa14.68□□□□□ -0.06
SMC4-213ENST00000472282 ABCC1P33527 1531 aa14.68□□□□□ -0.06
SMC4-213ENST00000472282 ARHGEF12Q9NZN5 1544 aa14.68□□□□□ -0.06
SMC4-213ENST00000472282 ABCA6Q8N139 1617 aa14.67□□□□□ -0.06
SMC4-213ENST00000472282 DIP2CQ9Y2E4 1556 aa14.66□□□□□ -0.06
SMC4-213ENST00000472282 SAMD9LQ8IVG5 1584 aa14.65□□□□□ -0.06
SMC4-213ENST00000472282 ZNF518AQ6AHZ1 1483 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms