RNA–Protein interactions for RNA: ENST00000472216.2

SPC25-203, Transcript of SPC25, NDC80 kinetochore complex component, humanhuman

TSL 5

Gene SPC25, Length 754 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC25-203ENST00000472216 DISP1Q96F81 1524 aa18.31■□□□□ 0.52
SPC25-203ENST00000472216 RBM33Q96EV2 1170 aaKnown RBP18.29■□□□□ 0.52
SPC25-203ENST00000472216 PPP6R1Q9UPN7 881 aa18.29■□□□□ 0.52
SPC25-203ENST00000472216 FHOD3Q2V2M9 1422 aa18.29■□□□□ 0.52
SPC25-203ENST00000472216 TRAPPC8Q9Y2L5 1435 aa18.29■□□□□ 0.52
SPC25-203ENST00000472216 ZFYVE16Q7Z3T8 1539 aa18.28■□□□□ 0.52
SPC25-203ENST00000472216 EFCAB5A4FU69 1503 aa18.27■□□□□ 0.51
SPC25-203ENST00000472216 CPS1P31327 1500 aa18.26■□□□□ 0.51
SPC25-203ENST00000472216 ZRANB1Q9UGI0 708 aa18.24■□□□□ 0.51
SPC25-203ENST00000472216 MAGI2Q86UL8 1455 aa18.23■□□□□ 0.51
SPC25-203ENST00000472216 ABCA9Q8IUA7 1624 aa18.23■□□□□ 0.51
SPC25-203ENST00000472216 IQGAP2Q13576 1575 aa18.22■□□□□ 0.51
SPC25-203ENST00000472216 RICTORQ6R327 1708 aa18.2■□□□□ 0.5
SPC25-203ENST00000472216 TRIM52Q96A61 297 aa18.2■□□□□ 0.5
SPC25-203ENST00000472216 ALKQ9UM73 1620 aa18.2■□□□□ 0.5
SPC25-203ENST00000472216 ZMYM4Q5VZL5 1548 aa18.18■□□□□ 0.5
SPC25-203ENST00000472216 ESF1Q9H501 851 aaKnown RBP18.17■□□□□ 0.5
SPC25-203ENST00000472216 IGF1RP08069 1367 aa18.17■□□□□ 0.5
SPC25-203ENST00000472216 BIVM-ERCC5R4GMW8 1640 aa18.15■□□□□ 0.5
SPC25-203ENST00000472216 ATP10AO60312 1499 aa18.14■□□□□ 0.49
SPC25-203ENST00000472216 PLA2R1Q13018 1463 aa18.14■□□□□ 0.49
SPC25-203ENST00000472216 SHANK2Q9UPX8 1470 aa18.14■□□□□ 0.49
SPC25-203ENST00000472216 C9orf84Q5VXU9 1444 aa18.12■□□□□ 0.49
SPC25-203ENST00000472216 C3P01024 1663 aa18.12■□□□□ 0.49
SPC25-203ENST00000472216 TCOF1Q13428 1488 aaKnown RBP18.11■□□□□ 0.49
SPC25-203ENST00000472216 RAPGEF2Q9Y4G8 1499 aa18.09■□□□□ 0.49
SPC25-203ENST00000472216 SETBP1Q9Y6X0 1596 aa18.05■□□□□ 0.48
SPC25-203ENST00000472216 UGGT2Q9NYU1 1516 aa18.05■□□□□ 0.48
SPC25-203ENST00000472216 ARID3CA6NKF2 412 aa18.04■□□□□ 0.48
SPC25-203ENST00000472216 ZNF772Q68DY9 489 aaPredicted RBP18.04■□□□□ 0.48
SPC25-203ENST00000472216 ABCA8O94911 1581 aa18.04■□□□□ 0.48
SPC25-203ENST00000472216 HECW1Q76N89 1606 aa18.03■□□□□ 0.48
SPC25-203ENST00000472216 RXRBP28702 533 aa18.02■□□□□ 0.48
SPC25-203ENST00000472216 CARMIL1Q5VZK9 1371 aa18.01■□□□□ 0.47
SPC25-203ENST00000472216 NPATQ14207 1427 aa18■□□□□ 0.47
SPC25-203ENST00000472216 LRRC7Q96NW7 1537 aa17.99■□□□□ 0.47
SPC25-203ENST00000472216 YY1P25490 414 aa17.99■□□□□ 0.47
SPC25-203ENST00000472216 ATP10BO94823 1461 aa17.95■□□□□ 0.46
SPC25-203ENST00000472216 CFAP74Q9C0B2 1584 aa17.94■□□□□ 0.46
SPC25-203ENST00000472216 CNTLNQ9NXG0 1405 aa17.93■□□□□ 0.46
SPC25-203ENST00000472216 FAM9AQ8IZU1 332 aaPredicted RBP17.93■□□□□ 0.46
SPC25-203ENST00000472216 CDK12Q9NYV4 1490 aaPredicted RBP17.92■□□□□ 0.46
SPC25-203ENST00000472216 SENP3-EIF4A1A0A087X0R7 540 aa17.91■□□□□ 0.46
SPC25-203ENST00000472216 KIF27Q86VH2 1401 aa17.9■□□□□ 0.46
SPC25-203ENST00000472216 RNF17Q9BXT8 1623 aaKnown RBP17.9■□□□□ 0.46
SPC25-203ENST00000472216 SUPT6HQ7KZ85 1726 aaKnown RBP17.89■□□□□ 0.46
SPC25-203ENST00000472216 FAM135BQ49AJ0 1406 aa17.88■□□□□ 0.45
SPC25-203ENST00000472216 SCAPERQ9BY12 1400 aa17.87■□□□□ 0.45
SPC25-203ENST00000472216 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.86■□□□□ 0.45
SPC25-203ENST00000472216 HNRNPUL2Q1KMD3 747 aaKnown RBP17.86■□□□□ 0.45
SPC25-203ENST00000472216 MEX3CQ5U5Q3 659 aaKnown RBP17.85■□□□□ 0.45
SPC25-203ENST00000472216 VWDEQ8N2E2 1590 aa17.85■□□□□ 0.45
SPC25-203ENST00000472216 CEP170BQ9Y4F5 1589 aaPredicted RBP17.84■□□□□ 0.45
SPC25-203ENST00000472216 NUTM2BA6NNL0 878 aaPredicted RBP17.84■□□□□ 0.45
SPC25-203ENST00000472216 NUTM2EB1AL46 878 aaPredicted RBP17.84■□□□□ 0.45
SPC25-203ENST00000472216 NUTM2DQ5VT03 806 aaPredicted RBP17.84■□□□□ 0.45
SPC25-203ENST00000472216 NUTM2AQ8IVF1 878 aaPredicted RBP17.84■□□□□ 0.45
SPC25-203ENST00000472216 ZNF142P52746 1687 aaPredicted RBP17.83■□□□□ 0.45
SPC25-203ENST00000472216 AGLP35573 1532 aa17.83■□□□□ 0.45
SPC25-203ENST00000472216 ZMYM3Q14202 1370 aa17.82■□□□□ 0.44
SPC25-203ENST00000472216 MYT1LQ9UL68 1186 aa17.81■□□□□ 0.44
SPC25-203ENST00000472216 GOLGA3Q08378 1498 aa17.8■□□□□ 0.44
SPC25-203ENST00000472216 JCADQ9P266 1359 aa17.79■□□□□ 0.44
SPC25-203ENST00000472216 MYO3AQ8NEV4 1616 aa17.78■□□□□ 0.44
SPC25-203ENST00000472216 LRP5O75197 1615 aa17.77■□□□□ 0.44
SPC25-203ENST00000472216 ANKLE2Q86XL3 938 aa17.76■□□□□ 0.43
SPC25-203ENST00000472216 ADRA2BP18089 450 aa17.75■□□□□ 0.43
SPC25-203ENST00000472216 ATAD2Q6PL18 1390 aa17.75■□□□□ 0.43
SPC25-203ENST00000472216 NEURL4Q96JN8 1562 aa17.74■□□□□ 0.43
SPC25-203ENST00000472216 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.73■□□□□ 0.434e-7■□□□□ 11.1
SPC25-203ENST00000472216 RAPGEF6Q8TEU7 1601 aa17.72■□□□□ 0.43
SPC25-203ENST00000472216 REREQ9P2R6 1566 aa17.72■□□□□ 0.43
SPC25-203ENST00000472216 POLR1AO95602 1720 aaPredicted RBP17.71■□□□□ 0.43
SPC25-203ENST00000472216 SPATA31A6Q5VVP1 1343 aa17.71■□□□□ 0.42
SPC25-203ENST00000472216 SYNMO15061 1565 aa17.7■□□□□ 0.42
SPC25-203ENST00000472216 PLEKHD1A6NEE1 506 aa17.7■□□□□ 0.42
SPC25-203ENST00000472216 CCDC125Q86Z20 511 aa17.7■□□□□ 0.42
SPC25-203ENST00000472216 MROH2AA6NES4 1674 aa17.69■□□□□ 0.42
SPC25-203ENST00000472216 RGS12O14924 1447 aa17.69■□□□□ 0.42
SPC25-203ENST00000472216 A2ML1A8K2U0 1454 aa17.69■□□□□ 0.42
SPC25-203ENST00000472216 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.68■□□□□ 0.421e-7■■□□□ 12.3
SPC25-203ENST00000472216 CDK13Q14004 1512 aaKnown RBP17.68■□□□□ 0.42
SPC25-203ENST00000472216 NPHP4O75161 1426 aaPredicted RBP17.66■□□□□ 0.42
SPC25-203ENST00000472216 DNMT1P26358 1616 aaKnown RBP17.66■□□□□ 0.42
SPC25-203ENST00000472216 ZNF518AQ6AHZ1 1483 aa17.65■□□□□ 0.42
SPC25-203ENST00000472216 RBM6P78332 1123 aaKnown RBP17.65■□□□□ 0.42
SPC25-203ENST00000472216 AFAP1Q8N556 730 aa17.65■□□□□ 0.42
SPC25-203ENST00000472216 LRP6O75581 1613 aa17.65■□□□□ 0.42
SPC25-203ENST00000472216 SLC34A2O95436 690 aa17.64■□□□□ 0.41
SPC25-203ENST00000472216 DIP2CQ9Y2E4 1556 aa17.64■□□□□ 0.41
SPC25-203ENST00000472216 CEP350Q5VT06 3117 aa17.62■□□□□ 0.41
SPC25-203ENST00000472216 STRCP1A6NGW2 1772 aa17.61■□□□□ 0.41
SPC25-203ENST00000472216 MED14O60244 1454 aa17.61■□□□□ 0.41
SPC25-203ENST00000472216 C1QTNF8P60827 252 aa17.6■□□□□ 0.41
SPC25-203ENST00000472216 EFCAB2Q5VUJ9 269 aa17.6■□□□□ 0.41
SPC25-203ENST00000472216 ROBO1Q9Y6N7 1651 aa17.6■□□□□ 0.41
SPC25-203ENST00000472216 PCDH10Q9P2E7 1040 aa17.59■□□□□ 0.41
SPC25-203ENST00000472216 EP400Q96L91 3159 aa17.59■□□□□ 0.41
SPC25-203ENST00000472216 PLCH2O75038 1416 aa17.58■□□□□ 0.41
SPC25-203ENST00000472216 QTRT2Q9H974 415 aaKnown RBP17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms