RNA–Protein interactions for RNA: ENST00000472034.5

LMNB1-205, Transcript of lamin B1, humanhuman

TSL 3

Gene LMNB1, Length 730 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-205ENST00000472034 FHAD1B1AJZ9 1412 aa8.26□□□□□ -1.09
LMNB1-205ENST00000472034 TTBK1Q5TCY1 1321 aaPredicted RBP8.26□□□□□ -1.09
LMNB1-205ENST00000472034 MAP3K4Q9Y6R4 1608 aa8.25□□□□□ -1.09
LMNB1-205ENST00000472034 ADAMTSL3P82987 1691 aa8.24□□□□□ -1.09
LMNB1-205ENST00000472034 RUSC2Q8N2Y8 1516 aa8.24□□□□□ -1.09
LMNB1-205ENST00000472034 FARP1Q9Y4F1 1045 aaPredicted RBP8.24□□□□□ -1.09
LMNB1-205ENST00000472034 PLB1Q6P1J6 1458 aa8.22□□□□□ -1.09
LMNB1-205ENST00000472034 EPRSP07814 1512 aaKnown RBP8.22□□□□□ -1.09
LMNB1-205ENST00000472034 TEX14Q8IWB6 1497 aa8.21□□□□□ -1.09
LMNB1-205ENST00000472034 ABCC2Q92887 1545 aa8.21□□□□□ -1.1
LMNB1-205ENST00000472034 AMER1Q5JTC6 1135 aaPredicted RBP8.21□□□□□ -1.1
LMNB1-205ENST00000472034 MADDQ8WXG6 1647 aa8.2□□□□□ -1.1
LMNB1-205ENST00000472034 CUL7Q14999 1698 aa8.2□□□□□ -1.1
LMNB1-205ENST00000472034 PAK3O75914 559 aaPredicted RBP8.19□□□□□ -1.1
LMNB1-205ENST00000472034 MNX1P50219 401 aaPredicted RBP8.19□□□□□ -1.1
LMNB1-205ENST00000472034 GSE1Q14687 1217 aa8.17□□□□□ -1.1
LMNB1-205ENST00000472034 FAM212AQ96EL1 285 aa8.17□□□□□ -1.1
LMNB1-205ENST00000472034 PTPRGP23470 1445 aa8.17□□□□□ -1.1
LMNB1-205ENST00000472034 DCAF8Q5TAQ9 597 aa8.15□□□□□ -1.1
LMNB1-205ENST00000472034 CIZ1Q9ULV3 898 aaPredicted RBP8.15□□□□□ -1.1
LMNB1-205ENST00000472034 RIMS1Q86UR5 1692 aaKnown RBP8.14□□□□□ -1.11
LMNB1-205ENST00000472034 NUBP1P53384 320 aa8.14□□□□□ -1.11
LMNB1-205ENST00000472034 BCORL1Q5H9F3 1711 aa8.14□□□□□ -1.11
LMNB1-205ENST00000472034 ERICH3Q5RHP9 1530 aa8.13□□□□□ -1.11
LMNB1-205ENST00000472034 POTEHQ6S545 545 aa8.13□□□□□ -1.11
LMNB1-205ENST00000472034 KIAA0586Q9BVV6 1533 aa8.13□□□□□ -1.11
LMNB1-205ENST00000472034 MED1Q15648 1581 aaPredicted RBP8.11□□□□□ -1.11
LMNB1-205ENST00000472034 ARID4BQ4LE39 1312 aaPredicted RBP8.1□□□□□ -1.11
LMNB1-205ENST00000472034 HAX1O00165 279 aa8.1□□□□□ -1.11
LMNB1-205ENST00000472034 TSPYL2Q9H2G4 693 aaPredicted RBP8.1□□□□□ -1.11
LMNB1-205ENST00000472034 WRNQ14191 1432 aaPredicted RBP eCLIP8.1□□□□□ -1.11
LMNB1-205ENST00000472034 STRCQ7RTU9 1775 aa8.1□□□□□ -1.11
LMNB1-205ENST00000472034 CD44P16070 742 aaKnown RBP8.09□□□□□ -1.11
LMNB1-205ENST00000472034 RASEFQ8IZ41 740 aa8.09□□□□□ -1.11
LMNB1-205ENST00000472034 ZCCHC11Q5TAX3 1644 aaKnown RBP8.09□□□□□ -1.11
LMNB1-205ENST00000472034 CD109Q6YHK3 1445 aa8.09□□□□□ -1.11
LMNB1-205ENST00000472034 MAGI3Q5TCQ9 1506 aa8.08□□□□□ -1.12
LMNB1-205ENST00000472034 KDM5BQ9UGL1 1544 aa8.08□□□□□ -1.12
LMNB1-205ENST00000472034 UHRF1BP1LA0JNW5 1464 aa8.08□□□□□ -1.12
LMNB1-205ENST00000472034 UACAQ9BZF9 1416 aa8.08□□□□□ -1.12
LMNB1-205ENST00000472034 TNIKQ9UKE5 1360 aa8.08□□□□□ -1.12
LMNB1-205ENST00000472034 LTBP4Q8N2S1 1624 aa8.07□□□□□ -1.12
LMNB1-205ENST00000472034 RAPGEF3O95398 923 aa8.06□□□□□ -1.12
LMNB1-205ENST00000472034 RTN4Q9NQC3 1192 aaKnown RBP8.06□□□□□ -1.12
LMNB1-205ENST00000472034 ZRANB1Q9UGI0 708 aa8.06□□□□□ -1.12
LMNB1-205ENST00000472034 WDR7Q9Y4E6 1490 aa8.06□□□□□ -1.12
LMNB1-205ENST00000472034 SRCAPQ6ZRS2 3230 aa8.05□□□□□ -1.12
LMNB1-205ENST00000472034 YEATS2Q9ULM3 1422 aa8.05□□□□□ -1.12
LMNB1-205ENST00000472034 C19orf67A6NJJ6 358 aa8.05□□□□□ -1.12
LMNB1-205ENST00000472034 KCNH8Q96L42 1107 aa8.05□□□□□ -1.12
LMNB1-205ENST00000472034 ARAP3Q8WWN8 1544 aa8.04□□□□□ -1.12
LMNB1-205ENST00000472034 UBAP1LF5GYI3 381 aa8.04□□□□□ -1.12
LMNB1-205ENST00000472034 ECM2O94769 699 aaPredicted RBP8.04□□□□□ -1.12
LMNB1-205ENST00000472034 CFAP43Q8NDM7 1665 aa8.03□□□□□ -1.12
LMNB1-205ENST00000472034 HSPA1LP34931 641 aa8.02□□□□□ -1.13
LMNB1-205ENST00000472034 SIGLEC1Q9BZZ2 1709 aa8.02□□□□□ -1.13
LMNB1-205ENST00000472034 FRMPD1Q5SYB0 1578 aa8.01□□□□□ -1.13
LMNB1-205ENST00000472034 PKD2Q13563 968 aa8.01□□□□□ -1.13
LMNB1-205ENST00000472034 TAOK2Q9UL54 1235 aa8□□□□□ -1.13
LMNB1-205ENST00000472034 CCDC61Q9Y6R9 512 aa8□□□□□ -1.13
LMNB1-205ENST00000472034 IQSEC2Q5JU85 1478 aa8□□□□□ -1.13
LMNB1-205ENST00000472034 PYGBP11216 843 aa7.99□□□□□ -1.13
LMNB1-205ENST00000472034 CHRM1P11229 460 aaPredicted RBP7.99□□□□□ -1.13
LMNB1-205ENST00000472034 CEBPAP49715 358 aaPredicted RBP7.99□□□□□ -1.13
LMNB1-205ENST00000472034 CLCN6P51797 869 aa7.99□□□□□ -1.13
LMNB1-205ENST00000472034 MLECQ14165 292 aa7.99□□□□□ -1.13
LMNB1-205ENST00000472034 CARMIL2Q6F5E8 1435 aa7.99□□□□□ -1.13
LMNB1-205ENST00000472034 PREX1Q8TCU6 1659 aa7.98□□□□□ -1.13
LMNB1-205ENST00000472034 DISP1Q96F81 1524 aa7.98□□□□□ -1.13
LMNB1-205ENST00000472034 PTPRTO14522 1441 aa7.98□□□□□ -1.13
LMNB1-205ENST00000472034 BIVM-ERCC5R4GMW8 1640 aa7.98□□□□□ -1.13
LMNB1-205ENST00000472034 ZNF579Q8NAF0 562 aaKnown RBP7.97□□□□□ -1.13
LMNB1-205ENST00000472034 ARHGEF40Q8TER5 1519 aa7.97□□□□□ -1.13
LMNB1-205ENST00000472034 TTC37Q6PGP7 1564 aa7.97□□□□□ -1.13
LMNB1-205ENST00000472034 FER1L4A9Z1Z3 1794 aa7.95□□□□□ -1.14
LMNB1-205ENST00000472034 ZNF467Q7Z7K2 595 aaPredicted RBP7.95□□□□□ -1.14
LMNB1-205ENST00000472034 SGIP1Q9BQI5 828 aa7.95□□□□□ -1.14
LMNB1-205ENST00000472034 RGS17Q9UGC6 210 aaPredicted RBP7.95□□□□□ -1.14
LMNB1-205ENST00000472034 ZNF335Q9H4Z2 1342 aaPredicted RBP7.95□□□□□ -1.14
LMNB1-205ENST00000472034 PIP4K2BP78356 416 aa7.94□□□□□ -1.14
LMNB1-205ENST00000472034 PCDHB13Q9Y5F0 798 aa7.93□□□□□ -1.14
LMNB1-205ENST00000472034 IGF1RP08069 1367 aa7.93□□□□□ -1.14
LMNB1-205ENST00000472034 ARID3CA6NKF2 412 aa7.92□□□□□ -1.14
LMNB1-205ENST00000472034 KIF12Q96FN5 646 aa7.92□□□□□ -1.14
LMNB1-205ENST00000472034 PHF12Q96QT6 1004 aa7.92□□□□□ -1.14
LMNB1-205ENST00000472034 UHRF1BP1Q6BDS2 1440 aa7.92□□□□□ -1.14
LMNB1-205ENST00000472034 IQGAP2Q13576 1575 aa7.92□□□□□ -1.14
LMNB1-205ENST00000472034 RIOK3O14730 519 aaKnown RBP7.91□□□□□ -1.14
LMNB1-205ENST00000472034 MAP3K13O43283 966 aa7.91□□□□□ -1.14
LMNB1-205ENST00000472034 SETD1AO15047 1707 aaKnown RBP7.9□□□□□ -1.14
LMNB1-205ENST00000472034 FANCAO15360 1455 aa7.9□□□□□ -1.14
LMNB1-205ENST00000472034 POGZQ7Z3K3 1410 aa7.9□□□□□ -1.14
LMNB1-205ENST00000472034 RGL2O15211 777 aa7.89□□□□□ -1.15
LMNB1-205ENST00000472034 EVX2Q03828 476 aa7.89□□□□□ -1.15
LMNB1-205ENST00000472034 NCOA1Q15788 1441 aa7.88□□□□□ -1.15
LMNB1-205ENST00000472034 VGFO15240 615 aaPredicted RBP7.88□□□□□ -1.15
LMNB1-205ENST00000472034 RICTORQ6R327 1708 aa7.88□□□□□ -1.15
LMNB1-205ENST00000472034 KIAA0556O60303 1618 aa7.88□□□□□ -1.15
LMNB1-205ENST00000472034 ARHGEF12Q9NZN5 1544 aa7.88□□□□□ -1.15
LMNB1-205ENST00000472034 NEO1Q92859 1461 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms