RNA–Protein interactions for RNA: ENST00000471654.1

KLHL29-202, Transcript of kelch like family member 29, humanhuman

TSL 1 (best)

Gene KLHL29, Length 6,385 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL29-202ENST00000471654 CARD11Q9BXL7 1154 aa16.87■□□□□ 0.29
KLHL29-202ENST00000471654 CC2D1BQ5T0F9 858 aaKnown RBP16.86■□□□□ 0.29
KLHL29-202ENST00000471654 RTF1Q92541 710 aaKnown RBP16.86■□□□□ 0.29
KLHL29-202ENST00000471654 WRNQ14191 1432 aaPredicted RBP eCLIP16.85■□□□□ 0.29
KLHL29-202ENST00000471654 MEX3CQ5U5Q3 659 aaKnown RBP16.83■□□□□ 0.29
KLHL29-202ENST00000471654 RB1CC1Q8TDY2 1594 aa16.83■□□□□ 0.29
KLHL29-202ENST00000471654 GOLGA6L4A6NEF3 574 aa16.83■□□□□ 0.28
KLHL29-202ENST00000471654 GGT6Q6P531 493 aa16.83■□□□□ 0.28
KLHL29-202ENST00000471654 CHMP3Q9Y3E7 222 aa16.83■□□□□ 0.28
KLHL29-202ENST00000471654 RGS3P49796 1198 aa16.83■□□□□ 0.28
KLHL29-202ENST00000471654 APBB1O00213 710 aa16.81■□□□□ 0.28
KLHL29-202ENST00000471654 VPS53Q5VIR6 699 aa16.8■□□□□ 0.28
KLHL29-202ENST00000471654 HSP90AB1P08238 724 aaKnown RBP16.79■□□□□ 0.28
KLHL29-202ENST00000471654 CCNB3Q8WWL7 1395 aa16.79■□□□□ 0.28
KLHL29-202ENST00000471654 DCAF8L1A6NGE4 600 aa16.78■□□□□ 0.28
KLHL29-202ENST00000471654 GTF2E1P29083 439 aaPredicted RBP16.78■□□□□ 0.28
KLHL29-202ENST00000471654 TAF7LQ5H9L4 462 aa16.78■□□□□ 0.28
KLHL29-202ENST00000471654 PNNQ9H307 717 aaKnown RBP16.77■□□□□ 0.28
KLHL29-202ENST00000471654 GORABQ5T7V8 394 aa16.77■□□□□ 0.27
KLHL29-202ENST00000471654 KIAA2012Q0VF49 1180 aa16.75■□□□□ 0.27
KLHL29-202ENST00000471654 FRAT2O75474 233 aaPredicted RBP16.75■□□□□ 0.27
KLHL29-202ENST00000471654 KANK1Q14678 1352 aa16.74■□□□□ 0.27
KLHL29-202ENST00000471654 NOC3LQ8WTT2 800 aaKnown RBP16.74■□□□□ 0.27
KLHL29-202ENST00000471654 WWC1Q8IX03 1113 aa16.73■□□□□ 0.27
KLHL29-202ENST00000471654 NRDCO43847 1150 aa16.73■□□□□ 0.27
KLHL29-202ENST00000471654 TIMELESSQ9UNS1 1208 aa16.73■□□□□ 0.27
KLHL29-202ENST00000471654 FBXO3Q9UK99 471 aa16.73■□□□□ 0.27
KLHL29-202ENST00000471654 CNKSR2Q8WXI2 1034 aa16.72■□□□□ 0.27
KLHL29-202ENST00000471654 DRC7Q8IY82 874 aa16.71■□□□□ 0.27
KLHL29-202ENST00000471654 L1TD1Q5T7N2 865 aaKnown RBP16.71■□□□□ 0.27
KLHL29-202ENST00000471654 CHMP4BQ9H444 224 aaKnown RBP16.7■□□□□ 0.26
KLHL29-202ENST00000471654 SOGA1O94964 1423 aa16.7■□□□□ 0.26
KLHL29-202ENST00000471654 KIF27Q86VH2 1401 aa16.69■□□□□ 0.26
KLHL29-202ENST00000471654 MORC1Q86VD1 984 aa16.68■□□□□ 0.26
KLHL29-202ENST00000471654 CWC22Q9HCG8 908 aaKnown RBP16.67■□□□□ 0.26
KLHL29-202ENST00000471654 SETD5Q9C0A6 1442 aa16.67■□□□□ 0.26
KLHL29-202ENST00000471654 CHAF1AQ13111 956 aaPredicted RBP16.67■□□□□ 0.26
KLHL29-202ENST00000471654 MCCP23508 829 aa16.67■□□□□ 0.26
KLHL29-202ENST00000471654 RAD21O60216 631 aa16.67■□□□□ 0.26
KLHL29-202ENST00000471654 HSPA5P11021 654 aaKnown RBP16.66■□□□□ 0.26
KLHL29-202ENST00000471654 HDGFL2Q7Z4V5 671 aaPredicted RBP16.66■□□□□ 0.26
KLHL29-202ENST00000471654 SPRYD3Q8NCJ5 442 aa16.66■□□□□ 0.26
KLHL29-202ENST00000471654 LTV1Q96GA3 475 aaPredicted RBP16.66■□□□□ 0.26
KLHL29-202ENST00000471654 NUTM2FA1L443 756 aa16.65■□□□□ 0.26
KLHL29-202ENST00000471654 RASSF8Q8NHQ8 419 aa16.65■□□□□ 0.26
KLHL29-202ENST00000471654 EVA1CP58658 441 aa16.65■□□□□ 0.26
KLHL29-202ENST00000471654 CREBRFQ8IUR6 639 aa16.65■□□□□ 0.26
KLHL29-202ENST00000471654 MARCH6O60337 910 aa16.65■□□□□ 0.26
KLHL29-202ENST00000471654 TOMM22Q9NS69 142 aa16.64■□□□□ 0.25
KLHL29-202ENST00000471654 VPS8Q8N3P4 1428 aa16.64■□□□□ 0.25
KLHL29-202ENST00000471654 HSP90B1P14625 803 aaKnown RBP16.63■□□□□ 0.25
KLHL29-202ENST00000471654 KIAA1211Q6ZU35 1233 aa16.63■□□□□ 0.25
KLHL29-202ENST00000471654 IPO9Q96P70 1041 aaKnown RBP16.63■□□□□ 0.25
KLHL29-202ENST00000471654 DCAF11Q8TEB1 546 aa16.63■□□□□ 0.25
KLHL29-202ENST00000471654 FBXW7Q969H0 707 aa16.63■□□□□ 0.25
KLHL29-202ENST00000471654 CTDP1Q9Y5B0 961 aaPredicted RBP16.62■□□□□ 0.25
KLHL29-202ENST00000471654 NUTM2DQ5VT03 806 aaPredicted RBP16.62■□□□□ 0.25
KLHL29-202ENST00000471654 EID1Q9Y6B2 187 aa16.62■□□□□ 0.25
KLHL29-202ENST00000471654 MS4A1P11836 297 aa16.61■□□□□ 0.25
KLHL29-202ENST00000471654 HSCBQ8IWL3 235 aa16.6■□□□□ 0.25
KLHL29-202ENST00000471654 NGDNQ8NEJ9 315 aaKnown RBP16.6■□□□□ 0.25
KLHL29-202ENST00000471654 TCERG1O14776 1098 aaKnown RBP16.6■□□□□ 0.25
KLHL29-202ENST00000471654 TMF1P82094 1093 aa16.59■□□□□ 0.25
KLHL29-202ENST00000471654 EIF4G1Q04637 1599 aaKnown RBP16.58■□□□□ 0.24
KLHL29-202ENST00000471654 TRIM34Q9BYJ4 488 aa16.58■□□□□ 0.24
KLHL29-202ENST00000471654 MSNP26038 577 aaKnown RBP16.58■□□□□ 0.24
KLHL29-202ENST00000471654 A0A0U1RQG5 324 aaPredicted RBP16.57■□□□□ 0.24
KLHL29-202ENST00000471654 KANK4Q5T7N3 995 aaPredicted RBP16.57■□□□□ 0.24
KLHL29-202ENST00000471654 RAB3GAP2Q9H2M9 1393 aa16.57■□□□□ 0.24
KLHL29-202ENST00000471654 TCEAL9Q9UHQ7 104 aa16.56■□□□□ 0.24
KLHL29-202ENST00000471654 FHAD1B1AJZ9 1412 aa16.55■□□□□ 0.24
KLHL29-202ENST00000471654 RCAN3Q9UKA8 241 aa16.55■□□□□ 0.24
KLHL29-202ENST00000471654 SYTL4Q96C24 671 aaPredicted RBP16.55■□□□□ 0.24
KLHL29-202ENST00000471654 SAMD1Q6SPF0 538 aaPredicted RBP16.54■□□□□ 0.24
KLHL29-202ENST00000471654 CEP89Q96ST8 783 aa16.54■□□□□ 0.24
KLHL29-202ENST00000471654 BAZ1BQ9UIG0 1483 aaKnown RBP16.53■□□□□ 0.24
KLHL29-202ENST00000471654 ABCC8Q09428 1581 aa16.52■□□□□ 0.23
KLHL29-202ENST00000471654 AMPHP49418 695 aa16.51■□□□□ 0.23
KLHL29-202ENST00000471654 PPP1R1BQ9UD71 204 aaPredicted RBP16.51■□□□□ 0.23
KLHL29-202ENST00000471654 CECR2Q9BXF3 1484 aa16.51■□□□□ 0.23
KLHL29-202ENST00000471654 SPAG9O60271 1321 aaKnown RBP16.5■□□□□ 0.23
KLHL29-202ENST00000471654 SLC4A10Q6U841 1118 aa16.5■□□□□ 0.23
KLHL29-202ENST00000471654 STK31Q9BXU1 1019 aa16.5■□□□□ 0.23
KLHL29-202ENST00000471654 BAZ1AQ9NRL2 1556 aaPredicted RBP16.5■□□□□ 0.23
KLHL29-202ENST00000471654 ARHGAP35Q9NRY4 1499 aa16.5■□□□□ 0.23
KLHL29-202ENST00000471654 GZF1Q9H116 711 aaPredicted RBP16.49■□□□□ 0.23
KLHL29-202ENST00000471654 SLKQ9H2G2 1235 aaPredicted RBP16.48■□□□□ 0.23
KLHL29-202ENST00000471654 U2AF1L5P0DN76 240 aaPredicted RBP16.48■□□□□ 0.23
KLHL29-202ENST00000471654 U2AF1Q01081 240 aaKnown RBP eCLIP16.48■□□□□ 0.23
KLHL29-202ENST00000471654 CCDC88BA6NC98 1476 aa16.48■□□□□ 0.23
KLHL29-202ENST00000471654 TRIM6-TRIM34B2RNG4 842 aa16.47■□□□□ 0.23
KLHL29-202ENST00000471654 GPATCH3Q96I76 525 aa16.47■□□□□ 0.23
KLHL29-202ENST00000471654 NGEFQ8N5V2 710 aa16.47■□□□□ 0.23
KLHL29-202ENST00000471654 KTN1Q86UP2 1357 aaKnown RBP16.47■□□□□ 0.23
KLHL29-202ENST00000471654 ITPRIPQ8IWB1 547 aa16.46■□□□□ 0.23
KLHL29-202ENST00000471654 FANCIQ9NVI1 1328 aa16.45■□□□□ 0.22
KLHL29-202ENST00000471654 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.45■□□□□ 0.22
KLHL29-202ENST00000471654 NACADO15069 1562 aa16.44■□□□□ 0.22
KLHL29-202ENST00000471654 PES1O00541 588 aaKnown RBP16.44■□□□□ 0.22
KLHL29-202ENST00000471654 FOXD1Q16676 465 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms