RNA–Protein interactions for RNA: ENST00000471595.5

PCCB-210, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCCB, Length 6,090 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-210ENST00000471595 RCAN3Q9UKA8 241 aa16.67■□□□□ 0.26
PCCB-210ENST00000471595 C14orf37Q86TY3 774 aa16.66■□□□□ 0.26
PCCB-210ENST00000471595 L3MBTL2Q969R5 705 aa16.66■□□□□ 0.26
PCCB-210ENST00000471595 TSHZ2Q9NRE2 1034 aa16.66■□□□□ 0.26
PCCB-210ENST00000471595 U2SURPO15042 1029 aaKnown RBP16.66■□□□□ 0.26
PCCB-210ENST00000471595 MORC1Q86VD1 984 aa16.66■□□□□ 0.26
PCCB-210ENST00000471595 TCERG1O14776 1098 aaKnown RBP16.65■□□□□ 0.26
PCCB-210ENST00000471595 ZBTB7CA1YPR0 619 aa16.62■□□□□ 0.25
PCCB-210ENST00000471595 HSP90AB1P08238 724 aaKnown RBP16.61■□□□□ 0.25
PCCB-210ENST00000471595 RSPH4AQ5TD94 716 aa16.61■□□□□ 0.25
PCCB-210ENST00000471595 ARID4BQ4LE39 1312 aaPredicted RBP16.6■□□□□ 0.25
PCCB-210ENST00000471595 PDE3BQ13370 1112 aa16.6■□□□□ 0.25
PCCB-210ENST00000471595 CFAP44Q96MT7 982 aa16.59■□□□□ 0.25
PCCB-210ENST00000471595 DEKP35659 375 aaKnown RBP16.59■□□□□ 0.25
PCCB-210ENST00000471595 EIF3AQ14152 1382 aaKnown RBP16.59■□□□□ 0.25
PCCB-210ENST00000471595 HSCBQ8IWL3 235 aa16.59■□□□□ 0.25
PCCB-210ENST00000471595 PTMAP06454 111 aaKnown RBP16.58■□□□□ 0.25
PCCB-210ENST00000471595 EFCAB2Q5VUJ9 269 aa16.58■□□□□ 0.24
PCCB-210ENST00000471595 NLRP13Q86W25 1043 aa16.58■□□□□ 0.24
PCCB-210ENST00000471595 HAP1P54257 671 aaPredicted RBP16.57■□□□□ 0.24
PCCB-210ENST00000471595 PHLDB1Q86UU1 1377 aa16.57■□□□□ 0.24
PCCB-210ENST00000471595 SRPK2P78362 688 aaKnown RBP16.57■□□□□ 0.24
PCCB-210ENST00000471595 L1TD1Q5T7N2 865 aaKnown RBP16.56■□□□□ 0.24
PCCB-210ENST00000471595 KIF15Q9NS87 1388 aa16.55■□□□□ 0.24
PCCB-210ENST00000471595 HDGFP51858 240 aaKnown RBP16.55■□□□□ 0.24
PCCB-210ENST00000471595 IPO8O15397 1037 aaKnown RBP16.54■□□□□ 0.24
PCCB-210ENST00000471595 RWDD1Q9H446 243 aaPredicted RBP16.52■□□□□ 0.23
PCCB-210ENST00000471595 ZRSR1Q15695 479 aaKnown RBP16.51■□□□□ 0.23
PCCB-210ENST00000471595 HDGFL2Q7Z4V5 671 aaPredicted RBP16.51■□□□□ 0.23
PCCB-210ENST00000471595 FANCD2Q9BXW9 1451 aa16.51■□□□□ 0.23
PCCB-210ENST00000471595 MYBBP1AQ9BQG0 1328 aaKnown RBP16.5■□□□□ 0.23
PCCB-210ENST00000471595 CALD1Q05682 793 aaKnown RBP16.5■□□□□ 0.23
PCCB-210ENST00000471595 IPO9Q96P70 1041 aaKnown RBP16.5■□□□□ 0.23
PCCB-210ENST00000471595 GOLGA2Q08379 1002 aa16.5■□□□□ 0.23
PCCB-210ENST00000471595 KIF21BO75037 1637 aa16.5■□□□□ 0.23
PCCB-210ENST00000471595 PMFBP1Q8TBY8 1022 aa16.49■□□□□ 0.23
PCCB-210ENST00000471595 NAP1L5Q96NT1 182 aaPredicted RBP16.48■□□□□ 0.23
PCCB-210ENST00000471595 HNRNPMP52272 730 aaKnown RBP eCLIP16.48■□□□□ 0.231e-7■■■□□ 18.3
PCCB-210ENST00000471595 PRKRIP1Q9H875 184 aaPredicted RBP16.48■□□□□ 0.23
PCCB-210ENST00000471595 ZBED9Q6R2W3 1325 aa16.48■□□□□ 0.23
PCCB-210ENST00000471595 DNTTIP2Q5QJE6 756 aaKnown RBP16.48■□□□□ 0.23
PCCB-210ENST00000471595 RTN4Q9NQC3 1192 aaKnown RBP16.47■□□□□ 0.23
PCCB-210ENST00000471595 IGF1RP08069 1367 aa16.47■□□□□ 0.23
PCCB-210ENST00000471595 PLEKHG5O94827 1062 aa16.46■□□□□ 0.23
PCCB-210ENST00000471595 GGT6Q6P531 493 aa16.46■□□□□ 0.23
PCCB-210ENST00000471595 U2AF1L5P0DN76 240 aaPredicted RBP16.46■□□□□ 0.23
PCCB-210ENST00000471595 PTMSP20962 102 aa16.46■□□□□ 0.23
PCCB-210ENST00000471595 MCCP23508 829 aa16.46■□□□□ 0.23
PCCB-210ENST00000471595 U2AF1Q01081 240 aaKnown RBP eCLIP16.46■□□□□ 0.23
PCCB-210ENST00000471595 OS9Q13438 667 aaPredicted RBP16.46■□□□□ 0.22
PCCB-210ENST00000471595 CUX1P39880 1505 aa16.45■□□□□ 0.22
PCCB-210ENST00000471595 CCDC144AA2RUR9 1427 aa16.44■□□□□ 0.22
PCCB-210ENST00000471595 SAFB2Q14151 953 aaKnown RBP eCLIP16.44■□□□□ 0.22
PCCB-210ENST00000471595 FGD5Q6ZNL6 1462 aa16.43■□□□□ 0.22
PCCB-210ENST00000471595 FGD6Q6ZV73 1430 aa16.42■□□□□ 0.22
PCCB-210ENST00000471595 ST20-MTHFSA0A0A6YYL1 179 aa16.42■□□□□ 0.22
PCCB-210ENST00000471595 ERICH3Q5RHP9 1530 aa16.42■□□□□ 0.22
PCCB-210ENST00000471595 JPH4Q96JJ6 628 aa16.41■□□□□ 0.22
PCCB-210ENST00000471595 USP47Q96K76 1375 aa16.41■□□□□ 0.22
PCCB-210ENST00000471595 SPAG9O60271 1321 aaKnown RBP16.41■□□□□ 0.22
PCCB-210ENST00000471595 ITPRIPQ8IWB1 547 aa16.41■□□□□ 0.22
PCCB-210ENST00000471595 STK26Q9P289 416 aa16.41■□□□□ 0.22
PCCB-210ENST00000471595 RTF1Q92541 710 aaKnown RBP16.41■□□□□ 0.22
PCCB-210ENST00000471595 GBP4Q96PP9 640 aa16.41■□□□□ 0.22
PCCB-210ENST00000471595 LRRC9Q6ZRR7 1453 aa16.41■□□□□ 0.22
PCCB-210ENST00000471595 UACAQ9BZF9 1416 aa16.4■□□□□ 0.22
PCCB-210ENST00000471595 KIF3BO15066 747 aa16.4■□□□□ 0.22
PCCB-210ENST00000471595 KCNJ4P48050 445 aa16.4■□□□□ 0.22
PCCB-210ENST00000471595 CENPJQ9HC77 1338 aaPredicted RBP16.4■□□□□ 0.22
PCCB-210ENST00000471595 A0A0G2JS52 829 aa16.4■□□□□ 0.22
PCCB-210ENST00000471595 MYOM3Q5VTT5 1437 aa16.4■□□□□ 0.22
PCCB-210ENST00000471595 TERF2IPQ9NYB0 399 aa16.38■□□□□ 0.21
PCCB-210ENST00000471595 GOLGA6L6A8MZA4 724 aa16.37■□□□□ 0.21
PCCB-210ENST00000471595 SPRYD3Q8NCJ5 442 aa16.37■□□□□ 0.21
PCCB-210ENST00000471595 CDK11BP21127 795 aaKnown RBP16.37■□□□□ 0.21
PCCB-210ENST00000471595 TPRNQ4KMQ1 711 aa16.37■□□□□ 0.21
PCCB-210ENST00000471595 FGD1P98174 961 aa16.36■□□□□ 0.21
PCCB-210ENST00000471595 PANK3Q9H999 370 aa16.36■□□□□ 0.21
PCCB-210ENST00000471595 GAPVD1Q14C86 1478 aa16.36■□□□□ 0.21
PCCB-210ENST00000471595 CENPQQ7L2Z9 268 aaPredicted RBP16.36■□□□□ 0.21
PCCB-210ENST00000471595 SMC4Q9NTJ3 1288 aa16.36■□□□□ 0.21
PCCB-210ENST00000471595 RRBP1Q9P2E9 1410 aaKnown RBP16.35■□□□□ 0.21
PCCB-210ENST00000471595 MSNP26038 577 aaKnown RBP16.35■□□□□ 0.21
PCCB-210ENST00000471595 RRP1P56182 461 aaKnown RBP16.35■□□□□ 0.21
PCCB-210ENST00000471595 PLCB2Q00722 1185 aa16.35■□□□□ 0.21
PCCB-210ENST00000471595 LMOD2Q6P5Q4 547 aa16.35■□□□□ 0.21
PCCB-210ENST00000471595 CCDC146Q8IYE0 955 aa16.34■□□□□ 0.21
PCCB-210ENST00000471595 CASKIN1Q8WXD9 1431 aa16.34■□□□□ 0.21
PCCB-210ENST00000471595 USP35Q9P2H5 1018 aa16.34■□□□□ 0.21
PCCB-210ENST00000471595 FANCIQ9NVI1 1328 aa16.34■□□□□ 0.21
PCCB-210ENST00000471595 GOLGA6L4A6NEF3 574 aa16.34■□□□□ 0.21
PCCB-210ENST00000471595 NCAPD3P42695 1498 aa16.33■□□□□ 0.21
PCCB-210ENST00000471595 SLKQ9H2G2 1235 aaPredicted RBP16.33■□□□□ 0.2
PCCB-210ENST00000471595 CHMP4AQ9BY43 222 aa16.32■□□□□ 0.2
PCCB-210ENST00000471595 NRDCO43847 1150 aa16.32■□□□□ 0.2
PCCB-210ENST00000471595 CCDC7Q96M83 1385 aa16.32■□□□□ 0.2
PCCB-210ENST00000471595 MLECQ14165 292 aa16.31■□□□□ 0.2
PCCB-210ENST00000471595 FYCO1Q9BQS8 1478 aa16.31■□□□□ 0.2
PCCB-210ENST00000471595 CNTLNQ9NXG0 1405 aa16.31■□□□□ 0.2
PCCB-210ENST00000471595 E9PSI1 815 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 241.4 ms