RNA–Protein interactions for RNA: ENST00000470724.5

NXF3-205, Transcript of nuclear RNA export factor 3, humanhuman

TSL 3

Gene NXF3, Length 607 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3-205ENST00000470724 SCAPERQ9BY12 1400 aa15.06■□□□□ 0
NXF3-205ENST00000470724 DENND4BO75064 1496 aaPredicted RBP15.06■□□□□ 0
NXF3-205ENST00000470724 CFAP74Q9C0B2 1584 aa15.06■□□□□ 0
NXF3-205ENST00000470724 KANK4Q5T7N3 995 aaPredicted RBP15.05■□□□□ -0
NXF3-205ENST00000470724 ARAP3Q8WWN8 1544 aa15.05■□□□□ -0
NXF3-205ENST00000470724 MYO5CQ9NQX4 1742 aa15.04■□□□□ -0
NXF3-205ENST00000470724 LRRC9Q6ZRR7 1453 aa15.02■□□□□ -0
NXF3-205ENST00000470724 NCOA2Q15596 1464 aa15.01□□□□□ -0.01
NXF3-205ENST00000470724 GPATCH8Q9UKJ3 1502 aaKnown RBP15.01□□□□□ -0.01
NXF3-205ENST00000470724 ARID4BQ4LE39 1312 aaPredicted RBP15□□□□□ -0.01
NXF3-205ENST00000470724 AEBP2Q6ZN18 517 aaPredicted RBP15□□□□□ -0.01
NXF3-205ENST00000470724 AFAP1Q8N556 730 aa14.99□□□□□ -0.01
NXF3-205ENST00000470724 PREX2Q70Z35 1606 aa14.99□□□□□ -0.01
NXF3-205ENST00000470724 HNRNPMP52272 730 aaKnown RBP eCLIP14.98□□□□□ -0.01
NXF3-205ENST00000470724 PPARGC1BQ86YN6 1023 aaKnown RBP14.98□□□□□ -0.01
NXF3-205ENST00000470724 POGZQ7Z3K3 1410 aa14.98□□□□□ -0.01
NXF3-205ENST00000470724 SUPT6HQ7KZ85 1726 aaKnown RBP14.97□□□□□ -0.01
NXF3-205ENST00000470724 MAP3K1Q13233 1512 aa14.97□□□□□ -0.01
NXF3-205ENST00000470724 ZNF644Q9H582 1327 aaPredicted RBP14.96□□□□□ -0.01
NXF3-205ENST00000470724 CDC42BPBQ9Y5S2 1711 aa14.94□□□□□ -0.02
NXF3-205ENST00000470724 ZNF518AQ6AHZ1 1483 aa14.94□□□□□ -0.02
NXF3-205ENST00000470724 FRMPD1Q5SYB0 1578 aa14.94□□□□□ -0.02
NXF3-205ENST00000470724 TRAPPC8Q9Y2L5 1435 aa14.93□□□□□ -0.02
NXF3-205ENST00000470724 CDC42BPAQ5VT25 1732 aa14.93□□□□□ -0.02
NXF3-205ENST00000470724 PLEKHH2Q8IVE3 1493 aa14.93□□□□□ -0.02
NXF3-205ENST00000470724 ABCC1P33527 1531 aa14.92□□□□□ -0.02
NXF3-205ENST00000470724 SYCP2Q9BX26 1530 aa14.92□□□□□ -0.02
NXF3-205ENST00000470724 ZFYVE16Q7Z3T8 1539 aa14.92□□□□□ -0.02
NXF3-205ENST00000470724 SPAG9O60271 1321 aaKnown RBP14.92□□□□□ -0.02
NXF3-205ENST00000470724 ITSN2Q9NZM3 1697 aa14.91□□□□□ -0.02
NXF3-205ENST00000470724 SAMD9LQ8IVG5 1584 aa14.91□□□□□ -0.02
NXF3-205ENST00000470724 MLECQ14165 292 aa14.91□□□□□ -0.02
NXF3-205ENST00000470724 ARHGEF12Q9NZN5 1544 aa14.91□□□□□ -0.02
NXF3-205ENST00000470724 YEATS2Q9ULM3 1422 aa14.91□□□□□ -0.02
NXF3-205ENST00000470724 MYOM3Q5VTT5 1437 aa14.89□□□□□ -0.03
NXF3-205ENST00000470724 RICTORQ6R327 1708 aa14.89□□□□□ -0.03
NXF3-205ENST00000470724 MAGI2Q86UL8 1455 aa14.89□□□□□ -0.03
NXF3-205ENST00000470724 CAMSAP2Q08AD1 1489 aa14.88□□□□□ -0.03
NXF3-205ENST00000470724 ZMYM4Q5VZL5 1548 aa14.87□□□□□ -0.03
NXF3-205ENST00000470724 ARHGEF40Q8TER5 1519 aa14.87□□□□□ -0.03
NXF3-205ENST00000470724 KIAA1107Q9UPP5 1409 aa14.87□□□□□ -0.03
NXF3-205ENST00000470724 KDM4FA0A1W2PPD8 638 aa14.87□□□□□ -0.03
NXF3-205ENST00000470724 FAM50AQ14320 339 aaKnown RBP14.87□□□□□ -0.03
NXF3-205ENST00000470724 TSPY4P0CV99 314 aa14.86□□□□□ -0.03
NXF3-205ENST00000470724 TSPY10P0CW01 314 aa14.86□□□□□ -0.03
NXF3-205ENST00000470724 PLPPR3Q6T4P5 718 aa14.86□□□□□ -0.03
NXF3-205ENST00000470724 ATP10AO60312 1499 aa14.84□□□□□ -0.03
NXF3-205ENST00000470724 HECW2Q9P2P5 1572 aa14.84□□□□□ -0.03
NXF3-205ENST00000470724 C9orf84Q5VXU9 1444 aa14.83□□□□□ -0.03
NXF3-205ENST00000470724 MIA2Q96PC5 1412 aa14.83□□□□□ -0.03
NXF3-205ENST00000470724 KDM5CP41229 1560 aa14.83□□□□□ -0.04
NXF3-205ENST00000470724 CCDC141Q6ZP82 1450 aa14.82□□□□□ -0.04
NXF3-205ENST00000470724 MLH3Q9UHC1 1453 aa14.82□□□□□ -0.04
NXF3-205ENST00000470724 RSPH4AQ5TD94 716 aa14.82□□□□□ -0.04
NXF3-205ENST00000470724 ESF1Q9H501 851 aaKnown RBP14.81□□□□□ -0.04
NXF3-205ENST00000470724 FGD6Q6ZV73 1430 aa14.81□□□□□ -0.04
NXF3-205ENST00000470724 MBD5Q9P267 1494 aa14.81□□□□□ -0.04
NXF3-205ENST00000470724 ATP7AQ04656 1500 aa14.79□□□□□ -0.04
NXF3-205ENST00000470724 DIP2CQ9Y2E4 1556 aa14.78□□□□□ -0.04
NXF3-205ENST00000470724 ITGAEP38570 1179 aa14.78□□□□□ -0.04
NXF3-205ENST00000470724 CHIC2Q9UKJ5 165 aa14.78□□□□□ -0.04
NXF3-205ENST00000470724 ABCA6Q8N139 1617 aa14.77□□□□□ -0.05
NXF3-205ENST00000470724 PTPN23Q9H3S7 1636 aa14.77□□□□□ -0.05
NXF3-205ENST00000470724 GGT6Q6P531 493 aa14.75□□□□□ -0.05
NXF3-205ENST00000470724 ARHGEF5Q12774 1597 aa14.74□□□□□ -0.05
NXF3-205ENST00000470724 A2MP01023 1474 aa14.74□□□□□ -0.05
NXF3-205ENST00000470724 RTEL1-TNFRSF6BF6WH68 1400 aa14.74□□□□□ -0.05
NXF3-205ENST00000470724 KIDINS220Q9ULH0 1771 aa14.73□□□□□ -0.05
NXF3-205ENST00000470724 INO80Q9ULG1 1556 aaPredicted RBP14.73□□□□□ -0.05
NXF3-205ENST00000470724 RRP7BPQ9NSQ0 103 aa14.72□□□□□ -0.05
NXF3-205ENST00000470724 DAPK1P53355 1430 aa14.72□□□□□ -0.05
NXF3-205ENST00000470724 TCOF1Q13428 1488 aaKnown RBP14.71□□□□□ -0.05
NXF3-205ENST00000470724 KIF3BO15066 747 aa14.71□□□□□ -0.05
NXF3-205ENST00000470724 ABCC5O15440 1437 aa14.71□□□□□ -0.05
NXF3-205ENST00000470724 BCORL1Q5H9F3 1711 aa14.7□□□□□ -0.06
NXF3-205ENST00000470724 DHX29Q7Z478 1369 aaKnown RBP14.7□□□□□ -0.06
NXF3-205ENST00000470724 MADDQ8WXG6 1647 aa14.7□□□□□ -0.06
NXF3-205ENST00000470724 SIGLEC1Q9BZZ2 1709 aa14.68□□□□□ -0.06
NXF3-205ENST00000470724 PTPRMP28827 1452 aa14.68□□□□□ -0.06
NXF3-205ENST00000470724 REREQ9P2R6 1566 aa14.68□□□□□ -0.06
NXF3-205ENST00000470724 CEBPAP49715 358 aaPredicted RBP14.67□□□□□ -0.06
NXF3-205ENST00000470724 ANKRD30AQ9BXX3 1397 aa14.67□□□□□ -0.06
NXF3-205ENST00000470724 KIF15Q9NS87 1388 aa14.67□□□□□ -0.06
NXF3-205ENST00000470724 AGLP35573 1532 aa14.66□□□□□ -0.06
NXF3-205ENST00000470724 RIMS1Q86UR5 1692 aaKnown RBP14.66□□□□□ -0.06
NXF3-205ENST00000470724 ADAMTSL3P82987 1691 aa14.65□□□□□ -0.06
NXF3-205ENST00000470724 SHANK2Q9UPX8 1470 aa14.65□□□□□ -0.06
NXF3-205ENST00000470724 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.65□□□□□ -0.06
NXF3-205ENST00000470724 DNMT1P26358 1616 aaKnown RBP14.65□□□□□ -0.06
NXF3-205ENST00000470724 ADGBQ8N7X0 1667 aa14.64□□□□□ -0.07
NXF3-205ENST00000470724 MAST1Q9Y2H9 1570 aa14.64□□□□□ -0.07
NXF3-205ENST00000470724 WASHC2CQ9Y4E1 1318 aa14.63□□□□□ -0.07
NXF3-205ENST00000470724 PLXNC1O60486 1568 aa14.62□□□□□ -0.07
NXF3-205ENST00000470724 FER1L4A9Z1Z3 1794 aa14.61□□□□□ -0.07
NXF3-205ENST00000470724 DUOX2Q9NRD8 1548 aa14.61□□□□□ -0.07
NXF3-205ENST00000470724 CNTLNQ9NXG0 1405 aa14.6□□□□□ -0.07
NXF3-205ENST00000470724 CROCC2H7BZ55 1655 aa14.59□□□□□ -0.07
NXF3-205ENST00000470724 NCOA1Q15788 1441 aa14.58□□□□□ -0.07
NXF3-205ENST00000470724 RRBP1Q9P2E9 1410 aaKnown RBP14.58□□□□□ -0.07
NXF3-205ENST00000470724 PPP6R1Q9UPN7 881 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms