RNA–Protein interactions for RNA: ENST00000470606.5

GTF3A-206, Transcript of general transcription factor IIIA, humanhuman

TSL 2

Gene GTF3A, Length 1,919 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-206ENST00000470606 WDR7Q9Y4E6 1490 aa12.53□□□□□ -0.4
GTF3A-206ENST00000470606 ABCC5O15440 1437 aa12.52□□□□□ -0.41
GTF3A-206ENST00000470606 DNMT1P26358 1616 aaKnown RBP12.51□□□□□ -0.41
GTF3A-206ENST00000470606 ZNF777Q9ULD5 760 aaPredicted RBP12.51□□□□□ -0.41
GTF3A-206ENST00000470606 RAB3GAP2Q9H2M9 1393 aa12.51□□□□□ -0.41
GTF3A-206ENST00000470606 DAPK1P53355 1430 aa12.5□□□□□ -0.41
GTF3A-206ENST00000470606 SAMD9LQ8IVG5 1584 aa12.5□□□□□ -0.41
GTF3A-206ENST00000470606 MYO5CQ9NQX4 1742 aa12.5□□□□□ -0.41
GTF3A-206ENST00000470606 SETD5Q9C0A6 1442 aa12.49□□□□□ -0.41
GTF3A-206ENST00000470606 CCER1Q8TC90 406 aaPredicted RBP12.49□□□□□ -0.41
GTF3A-206ENST00000470606 CHIC2Q9UKJ5 165 aa12.49□□□□□ -0.41
GTF3A-206ENST00000470606 NAIPQ13075 1403 aa12.48□□□□□ -0.41
GTF3A-206ENST00000470606 HFM1A2PYH4 1435 aa12.47□□□□□ -0.41
GTF3A-206ENST00000470606 MBD5Q9P267 1494 aa12.47□□□□□ -0.41
GTF3A-206ENST00000470606 PLCH2O75038 1416 aa12.47□□□□□ -0.41
GTF3A-206ENST00000470606 DHX57Q6P158 1386 aaKnown RBP12.47□□□□□ -0.41
GTF3A-206ENST00000470606 ABCA9Q8IUA7 1624 aa12.47□□□□□ -0.41
GTF3A-206ENST00000470606 KDM6BO15054 1643 aa12.46□□□□□ -0.41
GTF3A-206ENST00000470606 ARHGAP5Q13017 1502 aa12.46□□□□□ -0.41
GTF3A-206ENST00000470606 RRP7BPQ9NSQ0 103 aa12.46□□□□□ -0.42
GTF3A-206ENST00000470606 CROCC2H7BZ55 1655 aa12.46□□□□□ -0.42
GTF3A-206ENST00000470606 HNRNPMP52272 730 aaKnown RBP eCLIP12.45□□□□□ -0.42
GTF3A-206ENST00000470606 ARHGEF12Q9NZN5 1544 aa12.45□□□□□ -0.42
GTF3A-206ENST00000470606 AKNAQ7Z591 1439 aa12.45□□□□□ -0.42
GTF3A-206ENST00000470606 NPM1P06748 294 aaKnown RBP eCLIP12.44□□□□□ -0.42
GTF3A-206ENST00000470606 GCC2Q8IWJ2 1684 aa12.43□□□□□ -0.42
GTF3A-206ENST00000470606 SYCP2Q9BX26 1530 aa12.43□□□□□ -0.42
GTF3A-206ENST00000470606 MAPKBP1O60336 1514 aa12.43□□□□□ -0.42
GTF3A-206ENST00000470606 ARHGEF5Q12774 1597 aa12.42□□□□□ -0.42
GTF3A-206ENST00000470606 ROCK1Q13464 1354 aa12.41□□□□□ -0.42
GTF3A-206ENST00000470606 ARAP3Q8WWN8 1544 aa12.41□□□□□ -0.42
GTF3A-206ENST00000470606 NCOA1Q15788 1441 aa12.41□□□□□ -0.42
GTF3A-206ENST00000470606 ADGBQ8N7X0 1667 aa12.4□□□□□ -0.42
GTF3A-206ENST00000470606 ADGRL2O95490 1459 aa12.4□□□□□ -0.43
GTF3A-206ENST00000470606 ABCC1P33527 1531 aa12.39□□□□□ -0.43
GTF3A-206ENST00000470606 KIAA1107Q9UPP5 1409 aa12.39□□□□□ -0.43
GTF3A-206ENST00000470606 EFCAB2Q5VUJ9 269 aa12.39□□□□□ -0.43
GTF3A-206ENST00000470606 C9orf84Q5VXU9 1444 aa12.39□□□□□ -0.43
GTF3A-206ENST00000470606 SHANK2Q9UPX8 1470 aa12.38□□□□□ -0.43
GTF3A-206ENST00000470606 FANCAO15360 1455 aa12.38□□□□□ -0.43
GTF3A-206ENST00000470606 CCDC141Q6ZP82 1450 aa12.38□□□□□ -0.43
GTF3A-206ENST00000470606 TRAPPC8Q9Y2L5 1435 aa12.37□□□□□ -0.43
GTF3A-206ENST00000470606 DENND4BO75064 1496 aaPredicted RBP12.36□□□□□ -0.43
GTF3A-206ENST00000470606 ZEB1P37275 1124 aaPredicted RBP12.35□□□□□ -0.43
GTF3A-206ENST00000470606 CD109Q6YHK3 1445 aa12.35□□□□□ -0.43
GTF3A-206ENST00000470606 PLEKHH2Q8IVE3 1493 aa12.35□□□□□ -0.43
GTF3A-206ENST00000470606 AFAP1Q8N556 730 aa12.34□□□□□ -0.43
GTF3A-206ENST00000470606 MAST1Q9Y2H9 1570 aa12.34□□□□□ -0.43
GTF3A-206ENST00000470606 MAP3K4Q9Y6R4 1608 aa12.34□□□□□ -0.43
GTF3A-206ENST00000470606 ANKRD30AQ9BXX3 1397 aa12.33□□□□□ -0.44
GTF3A-206ENST00000470606 DIP2BQ9P265 1576 aa12.33□□□□□ -0.44
GTF3A-206ENST00000470606 TSPY4P0CV99 314 aa12.33□□□□□ -0.44
GTF3A-206ENST00000470606 TSPY10P0CW01 314 aa12.33□□□□□ -0.44
GTF3A-206ENST00000470606 RSPH4AQ5TD94 716 aa12.33□□□□□ -0.44
GTF3A-206ENST00000470606 GLI2P10070 1586 aa12.32□□□□□ -0.44
GTF3A-206ENST00000470606 ADGRL1O94910 1474 aa12.32□□□□□ -0.44
GTF3A-206ENST00000470606 KIF15Q9NS87 1388 aa12.31□□□□□ -0.44
GTF3A-206ENST00000470606 SCAPERQ9BY12 1400 aa12.31□□□□□ -0.44
GTF3A-206ENST00000470606 ANKRD50Q9ULJ7 1429 aa12.31□□□□□ -0.44
GTF3A-206ENST00000470606 CLSPNQ9HAW4 1339 aa12.31□□□□□ -0.44
GTF3A-206ENST00000470606 KIF13AQ9H1H9 1805 aa12.29□□□□□ -0.44
GTF3A-206ENST00000470606 PLXNC1O60486 1568 aa12.29□□□□□ -0.44
GTF3A-206ENST00000470606 PPRC1Q5VV67 1664 aaKnown RBP12.29□□□□□ -0.44
GTF3A-206ENST00000470606 FAM69CQ0P6D2 419 aa12.29□□□□□ -0.44
GTF3A-206ENST00000470606 ZFYVE16Q7Z3T8 1539 aa12.28□□□□□ -0.44
GTF3A-206ENST00000470606 TSPOAP1O95153 1857 aa12.27□□□□□ -0.44
GTF3A-206ENST00000470606 SIN3AQ96ST3 1273 aa12.27□□□□□ -0.44
GTF3A-206ENST00000470606 PZPP20742 1482 aa12.27□□□□□ -0.45
GTF3A-206ENST00000470606 INO80Q9ULG1 1556 aaPredicted RBP12.27□□□□□ -0.45
GTF3A-206ENST00000470606 TRIM52Q96A61 297 aa12.27□□□□□ -0.45
GTF3A-206ENST00000470606 MPHOSPH9Q99550 1183 aa12.26□□□□□ -0.45
GTF3A-206ENST00000470606 SPAG9O60271 1321 aaKnown RBP12.26□□□□□ -0.45
GTF3A-206ENST00000470606 KIDINS220Q9ULH0 1771 aa12.26□□□□□ -0.45
GTF3A-206ENST00000470606 FOXD1Q16676 465 aa12.25□□□□□ -0.45
GTF3A-206ENST00000470606 CFAP74Q9C0B2 1584 aa12.25□□□□□ -0.45
GTF3A-206ENST00000470606 NEO1Q92859 1461 aa12.25□□□□□ -0.45
GTF3A-206ENST00000470606 ATP7AQ04656 1500 aa12.24□□□□□ -0.45
GTF3A-206ENST00000470606 RTEL1-TNFRSF6BF6WH68 1400 aa12.24□□□□□ -0.45
GTF3A-206ENST00000470606 POGZQ7Z3K3 1410 aa12.24□□□□□ -0.45
GTF3A-206ENST00000470606 KDM5CP41229 1560 aa12.24□□□□□ -0.45
GTF3A-206ENST00000470606 ZNF518AQ6AHZ1 1483 aa12.23□□□□□ -0.45
GTF3A-206ENST00000470606 DUOX2Q9NRD8 1548 aa12.23□□□□□ -0.45
GTF3A-206ENST00000470606 RAPGEF3O95398 923 aa12.23□□□□□ -0.45
GTF3A-206ENST00000470606 RICTORQ6R327 1708 aa12.22□□□□□ -0.45
GTF3A-206ENST00000470606 KDM5DQ9BY66 1539 aa12.21□□□□□ -0.45
GTF3A-206ENST00000470606 FRMPD1Q5SYB0 1578 aa12.21□□□□□ -0.46
GTF3A-206ENST00000470606 NUP155O75694 1391 aa12.2□□□□□ -0.46
GTF3A-206ENST00000470606 SLC4A1APQ9BWU0 796 aaKnown RBP12.2□□□□□ -0.46
GTF3A-206ENST00000470606 UNC13BO14795 1591 aa12.2□□□□□ -0.46
GTF3A-206ENST00000470606 NEUROD1Q13562 356 aa12.19□□□□□ -0.46
GTF3A-206ENST00000470606 AEBP2Q6ZN18 517 aaPredicted RBP12.19□□□□□ -0.46
GTF3A-206ENST00000470606 ERBINQ96RT1 1412 aa12.19□□□□□ -0.46
GTF3A-206ENST00000470606 MLH3Q9UHC1 1453 aa12.19□□□□□ -0.46
GTF3A-206ENST00000470606 ANKRD30BQ9BXX2 1392 aa12.19□□□□□ -0.46
GTF3A-206ENST00000470606 MAGI2Q86UL8 1455 aa12.18□□□□□ -0.46
GTF3A-206ENST00000470606 COL17A1Q9UMD9 1497 aaPredicted RBP12.18□□□□□ -0.46
GTF3A-206ENST00000470606 HECW2Q9P2P5 1572 aa12.18□□□□□ -0.46
GTF3A-206ENST00000470606 ABCA6Q8N139 1617 aa12.18□□□□□ -0.46
GTF3A-206ENST00000470606 FAM135AQ9P2D6 1515 aa12.17□□□□□ -0.46
GTF3A-206ENST00000470606 PKD2Q13563 968 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms