RNA–Protein interactions for RNA: ENST00000470280.1

LDHB-205, Transcript of lactate dehydrogenase B, humanhuman

TSL 2

Gene LDHB, Length 710 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHB-205ENST00000470280 FRMPD1Q5SYB0 1578 aa16.87■□□□□ 0.29
LDHB-205ENST00000470280 DENND4BO75064 1496 aaPredicted RBP16.84■□□□□ 0.29
LDHB-205ENST00000470280 CFAP74Q9C0B2 1584 aa16.83■□□□□ 0.28
LDHB-205ENST00000470280 MYO5CQ9NQX4 1742 aa16.82■□□□□ 0.28
LDHB-205ENST00000470280 EFCAB2Q5VUJ9 269 aa16.81■□□□□ 0.28
LDHB-205ENST00000470280 ADGRL1O94910 1474 aa16.8■□□□□ 0.28
LDHB-205ENST00000470280 SCAPERQ9BY12 1400 aa16.8■□□□□ 0.28
LDHB-205ENST00000470280 RICTORQ6R327 1708 aa16.8■□□□□ 0.28
LDHB-205ENST00000470280 ARHGAP5Q13017 1502 aa16.8■□□□□ 0.28
LDHB-205ENST00000470280 CDC42BPBQ9Y5S2 1711 aa16.78■□□□□ 0.28
LDHB-205ENST00000470280 VPS8Q8N3P4 1428 aa16.78■□□□□ 0.28
LDHB-205ENST00000470280 PREX2Q70Z35 1606 aa16.77■□□□□ 0.27
LDHB-205ENST00000470280 MTUS2Q5JR59 1369 aa16.77■□□□□ 0.27
LDHB-205ENST00000470280 POGZQ7Z3K3 1410 aa16.76■□□□□ 0.27
LDHB-205ENST00000470280 ZMYM4Q5VZL5 1548 aa16.75■□□□□ 0.27
LDHB-205ENST00000470280 GPATCH8Q9UKJ3 1502 aaKnown RBP16.75■□□□□ 0.27
LDHB-205ENST00000470280 CDC42BPAQ5VT25 1732 aa16.74■□□□□ 0.27
LDHB-205ENST00000470280 YEATS2Q9ULM3 1422 aa16.74■□□□□ 0.27
LDHB-205ENST00000470280 ARHGEF12Q9NZN5 1544 aa16.73■□□□□ 0.27
LDHB-205ENST00000470280 EHBP1L1Q8N3D4 1523 aa16.72■□□□□ 0.27
LDHB-205ENST00000470280 ARHGEF40Q8TER5 1519 aa16.72■□□□□ 0.27
LDHB-205ENST00000470280 AFAP1Q8N556 730 aa16.72■□□□□ 0.27
LDHB-205ENST00000470280 TIAM1Q13009 1591 aa16.71■□□□□ 0.27
LDHB-205ENST00000470280 ABCC1P33527 1531 aa16.7■□□□□ 0.26
LDHB-205ENST00000470280 ZFYVE16Q7Z3T8 1539 aa16.7■□□□□ 0.26
LDHB-205ENST00000470280 TRAPPC8Q9Y2L5 1435 aa16.7■□□□□ 0.26
LDHB-205ENST00000470280 CCNB3Q8WWL7 1395 aa16.69■□□□□ 0.26
LDHB-205ENST00000470280 ZNF777Q9ULD5 760 aaPredicted RBP16.69■□□□□ 0.26
LDHB-205ENST00000470280 SAMD9LQ8IVG5 1584 aa16.68■□□□□ 0.26
LDHB-205ENST00000470280 ZNF518AQ6AHZ1 1483 aa16.68■□□□□ 0.26
LDHB-205ENST00000470280 MAGI2Q86UL8 1455 aa16.68■□□□□ 0.26
LDHB-205ENST00000470280 KDM5CP41229 1560 aa16.68■□□□□ 0.26
LDHB-205ENST00000470280 SIGLEC1Q9BZZ2 1709 aa16.67■□□□□ 0.26
LDHB-205ENST00000470280 KANK4Q5T7N3 995 aaPredicted RBP16.66■□□□□ 0.26
LDHB-205ENST00000470280 CFDP1Q9UEE9 299 aaPredicted RBP16.66■□□□□ 0.26
LDHB-205ENST00000470280 ITSN2Q9NZM3 1697 aa16.65■□□□□ 0.26
LDHB-205ENST00000470280 NCOA2Q15596 1464 aa16.65■□□□□ 0.26
LDHB-205ENST00000470280 LRRC9Q6ZRR7 1453 aa16.65■□□□□ 0.26
LDHB-205ENST00000470280 ARID4BQ4LE39 1312 aaPredicted RBP16.65■□□□□ 0.26
LDHB-205ENST00000470280 HNRNPMP52272 730 aaKnown RBP eCLIP16.64■□□□□ 0.25
LDHB-205ENST00000470280 SYCP2Q9BX26 1530 aa16.64■□□□□ 0.25
LDHB-205ENST00000470280 ZNF644Q9H582 1327 aaPredicted RBP16.64■□□□□ 0.25
LDHB-205ENST00000470280 ADAMTSL3P82987 1691 aa16.62■□□□□ 0.25
LDHB-205ENST00000470280 BCORL1Q5H9F3 1711 aa16.62■□□□□ 0.25
LDHB-205ENST00000470280 ATP10AO60312 1499 aa16.62■□□□□ 0.25
LDHB-205ENST00000470280 MAP3K1Q13233 1512 aa16.62■□□□□ 0.25
LDHB-205ENST00000470280 MLH3Q9UHC1 1453 aa16.61■□□□□ 0.25
LDHB-205ENST00000470280 HECW2Q9P2P5 1572 aa16.61■□□□□ 0.25
LDHB-205ENST00000470280 SUPT6HQ7KZ85 1726 aaKnown RBP16.61■□□□□ 0.25
LDHB-205ENST00000470280 C9orf84Q5VXU9 1444 aa16.6■□□□□ 0.25
LDHB-205ENST00000470280 KIAA1107Q9UPP5 1409 aa16.6■□□□□ 0.25
LDHB-205ENST00000470280 DIP2CQ9Y2E4 1556 aa16.6■□□□□ 0.25
LDHB-205ENST00000470280 MYT1LQ9UL68 1186 aa16.59■□□□□ 0.25
LDHB-205ENST00000470280 ABCA6Q8N139 1617 aa16.59■□□□□ 0.25
LDHB-205ENST00000470280 MAPK8IP2Q13387 824 aaPredicted RBP16.58■□□□□ 0.24
LDHB-205ENST00000470280 PLEKHH2Q8IVE3 1493 aa16.58■□□□□ 0.24
LDHB-205ENST00000470280 MADDQ8WXG6 1647 aa16.58■□□□□ 0.24
LDHB-205ENST00000470280 KIDINS220Q9ULH0 1771 aa16.57■□□□□ 0.24
LDHB-205ENST00000470280 MBD5Q9P267 1494 aa16.57■□□□□ 0.24
LDHB-205ENST00000470280 MLECQ14165 292 aa16.57■□□□□ 0.24
LDHB-205ENST00000470280 PTPRMP28827 1452 aa16.55■□□□□ 0.24
LDHB-205ENST00000470280 SCAF1Q9H7N4 1312 aaKnown RBP16.55■□□□□ 0.24
LDHB-205ENST00000470280 SPAG9O60271 1321 aaKnown RBP16.54■□□□□ 0.24
LDHB-205ENST00000470280 DMRT2Q9Y5R5 561 aa16.54■□□□□ 0.24
LDHB-205ENST00000470280 CAMSAP2Q08AD1 1489 aa16.53■□□□□ 0.24
LDHB-205ENST00000470280 REREQ9P2R6 1566 aa16.52■□□□□ 0.24
LDHB-205ENST00000470280 APLP2Q06481 763 aa16.52■□□□□ 0.24
LDHB-205ENST00000470280 INO80Q9ULG1 1556 aaPredicted RBP16.51■□□□□ 0.23
LDHB-205ENST00000470280 ATP7AQ04656 1500 aa16.51■□□□□ 0.23
LDHB-205ENST00000470280 RIMS1Q86UR5 1692 aaKnown RBP16.51■□□□□ 0.23
LDHB-205ENST00000470280 MYOM3Q5VTT5 1437 aa16.49■□□□□ 0.23
LDHB-205ENST00000470280 AGLP35573 1532 aa16.49■□□□□ 0.23
LDHB-205ENST00000470280 CCDC141Q6ZP82 1450 aa16.47■□□□□ 0.23
LDHB-205ENST00000470280 MIA2Q96PC5 1412 aa16.45■□□□□ 0.22
LDHB-205ENST00000470280 FER1L4A9Z1Z3 1794 aa16.45■□□□□ 0.22
LDHB-205ENST00000470280 RTEL1-TNFRSF6BF6WH68 1400 aa16.45■□□□□ 0.22
LDHB-205ENST00000470280 ARHGEF5Q12774 1597 aa16.44■□□□□ 0.22
LDHB-205ENST00000470280 A2MP01023 1474 aa16.44■□□□□ 0.22
LDHB-205ENST00000470280 PLXNC1O60486 1568 aa16.43■□□□□ 0.22
LDHB-205ENST00000470280 CEBPAP49715 358 aaPredicted RBP16.42■□□□□ 0.22
LDHB-205ENST00000470280 RSPH4AQ5TD94 716 aa16.42■□□□□ 0.22
LDHB-205ENST00000470280 FGD6Q6ZV73 1430 aa16.39■□□□□ 0.21
LDHB-205ENST00000470280 DHX29Q7Z478 1369 aaKnown RBP16.38■□□□□ 0.21
LDHB-205ENST00000470280 PTPN23Q9H3S7 1636 aa16.38■□□□□ 0.21
LDHB-205ENST00000470280 ADGBQ8N7X0 1667 aa16.38■□□□□ 0.21
LDHB-205ENST00000470280 TSPY4P0CV99 314 aa16.38■□□□□ 0.21
LDHB-205ENST00000470280 TSPY10P0CW01 314 aa16.38■□□□□ 0.21
LDHB-205ENST00000470280 TCOF1Q13428 1488 aaKnown RBP16.36■□□□□ 0.21
LDHB-205ENST00000470280 LMTK3Q96Q04 1460 aa16.36■□□□□ 0.21
LDHB-205ENST00000470280 MAST1Q9Y2H9 1570 aa16.36■□□□□ 0.21
LDHB-205ENST00000470280 GGT6Q6P531 493 aa16.35■□□□□ 0.21
LDHB-205ENST00000470280 ABCC5O15440 1437 aa16.35■□□□□ 0.21
LDHB-205ENST00000470280 PPARGC1BQ86YN6 1023 aaKnown RBP16.34■□□□□ 0.21
LDHB-205ENST00000470280 ESF1Q9H501 851 aaKnown RBP16.33■□□□□ 0.2
LDHB-205ENST00000470280 C3P01024 1663 aa16.33■□□□□ 0.2
LDHB-205ENST00000470280 KIF3BO15066 747 aa16.32■□□□□ 0.2
LDHB-205ENST00000470280 CNTLNQ9NXG0 1405 aa16.32■□□□□ 0.2
LDHB-205ENST00000470280 DAPK1P53355 1430 aa16.31■□□□□ 0.2
LDHB-205ENST00000470280 HSPA2P54652 639 aa16.31■□□□□ 0.2
LDHB-205ENST00000470280 DNMT1P26358 1616 aaKnown RBP16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms