RNA–Protein interactions for RNA: ENST00000470247.1

SREBF1-209, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 374 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-209ENST00000470247 PREX2Q70Z35 1606 aa17.28■□□□□ 0.36
SREBF1-209ENST00000470247 EFCAB2Q5VUJ9 269 aa17.27■□□□□ 0.36
SREBF1-209ENST00000470247 MYO5CQ9NQX4 1742 aa17.26■□□□□ 0.35
SREBF1-209ENST00000470247 TCOF1Q13428 1488 aaKnown RBP17.25■□□□□ 0.35
SREBF1-209ENST00000470247 ITSN2Q9NZM3 1697 aa17.24■□□□□ 0.35
SREBF1-209ENST00000470247 TRHP20396 242 aaPredicted RBP17.24■□□□□ 0.35
SREBF1-209ENST00000470247 ZNF777Q9ULD5 760 aaPredicted RBP17.24■□□□□ 0.35
SREBF1-209ENST00000470247 ARHGAP5Q13017 1502 aa17.24■□□□□ 0.35
SREBF1-209ENST00000470247 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.24■□□□□ 0.35
SREBF1-209ENST00000470247 FANCAO15360 1455 aa17.23■□□□□ 0.35
SREBF1-209ENST00000470247 PPRC1Q5VV67 1664 aaKnown RBP17.23■□□□□ 0.35
SREBF1-209ENST00000470247 PTPN23Q9H3S7 1636 aa17.22■□□□□ 0.35
SREBF1-209ENST00000470247 SAMD9LQ8IVG5 1584 aa17.21■□□□□ 0.35
SREBF1-209ENST00000470247 TRIM26Q12899 539 aaPredicted RBP17.21■□□□□ 0.35
SREBF1-209ENST00000470247 FAM50AQ14320 339 aaKnown RBP17.21■□□□□ 0.35
SREBF1-209ENST00000470247 CAMSAP2Q08AD1 1489 aa17.2■□□□□ 0.34
SREBF1-209ENST00000470247 ARHGEF12Q9NZN5 1544 aa17.2■□□□□ 0.34
SREBF1-209ENST00000470247 AKNAQ7Z591 1439 aa17.2■□□□□ 0.34
SREBF1-209ENST00000470247 KIAA1107Q9UPP5 1409 aa17.2■□□□□ 0.34
SREBF1-209ENST00000470247 MBD5Q9P267 1494 aa17.19■□□□□ 0.34
SREBF1-209ENST00000470247 HNRNPMP52272 730 aaKnown RBP eCLIP17.19■□□□□ 0.34
SREBF1-209ENST00000470247 NEO1Q92859 1461 aa17.18■□□□□ 0.34
SREBF1-209ENST00000470247 TSPOAP1O95153 1857 aa17.17■□□□□ 0.34
SREBF1-209ENST00000470247 PLEKHH2Q8IVE3 1493 aa17.16■□□□□ 0.34
SREBF1-209ENST00000470247 ABCC1P33527 1531 aa17.16■□□□□ 0.34
SREBF1-209ENST00000470247 ABCC5O15440 1437 aa17.15■□□□□ 0.34
SREBF1-209ENST00000470247 PTPRKQ15262 1439 aa17.15■□□□□ 0.34
SREBF1-209ENST00000470247 SCAPERQ9BY12 1400 aa17.15■□□□□ 0.34
SREBF1-209ENST00000470247 TEX14Q8IWB6 1497 aa17.15■□□□□ 0.34
SREBF1-209ENST00000470247 TRAPPC8Q9Y2L5 1435 aa17.14■□□□□ 0.33
SREBF1-209ENST00000470247 ADGRL1O94910 1474 aa17.14■□□□□ 0.33
SREBF1-209ENST00000470247 SYCP2Q9BX26 1530 aa17.13■□□□□ 0.33
SREBF1-209ENST00000470247 RSPH4AQ5TD94 716 aa17.13■□□□□ 0.33
SREBF1-209ENST00000470247 COL17A1Q9UMD9 1497 aaPredicted RBP17.12■□□□□ 0.33
SREBF1-209ENST00000470247 AFAP1Q8N556 730 aa17.12■□□□□ 0.33
SREBF1-209ENST00000470247 DAPK1P53355 1430 aa17.12■□□□□ 0.33
SREBF1-209ENST00000470247 ARHGEF5Q12774 1597 aa17.11■□□□□ 0.33
SREBF1-209ENST00000470247 CFAP74Q9C0B2 1584 aa17.11■□□□□ 0.33
SREBF1-209ENST00000470247 ITGAEP38570 1179 aa17.1■□□□□ 0.33
SREBF1-209ENST00000470247 DNMT1P26358 1616 aaKnown RBP17.1■□□□□ 0.33
SREBF1-209ENST00000470247 RAPGEF3O95398 923 aa17.09■□□□□ 0.33
SREBF1-209ENST00000470247 DENND4BO75064 1496 aaPredicted RBP17.08■□□□□ 0.32
SREBF1-209ENST00000470247 CCDC141Q6ZP82 1450 aa17.08■□□□□ 0.32
SREBF1-209ENST00000470247 POGZQ7Z3K3 1410 aa17.07■□□□□ 0.32
SREBF1-209ENST00000470247 PCGF6Q9BYE7 350 aa17.06■□□□□ 0.32
SREBF1-209ENST00000470247 CHIC2Q9UKJ5 165 aa17.05■□□□□ 0.32
SREBF1-209ENST00000470247 TSPY4P0CV99 314 aa17.04■□□□□ 0.32
SREBF1-209ENST00000470247 TSPY10P0CW01 314 aa17.04■□□□□ 0.32
SREBF1-209ENST00000470247 ZNF518AQ6AHZ1 1483 aa17.03■□□□□ 0.32
SREBF1-209ENST00000470247 SHANK2Q9UPX8 1470 aa17.03■□□□□ 0.32
SREBF1-209ENST00000470247 C9orf84Q5VXU9 1444 aa17.03■□□□□ 0.32
SREBF1-209ENST00000470247 KDM5CP41229 1560 aa17.02■□□□□ 0.32
SREBF1-209ENST00000470247 FRMPD1Q5SYB0 1578 aa17.02■□□□□ 0.32
SREBF1-209ENST00000470247 RICTORQ6R327 1708 aa17.01■□□□□ 0.31
SREBF1-209ENST00000470247 SPAG9O60271 1321 aaKnown RBP17.01■□□□□ 0.31
SREBF1-209ENST00000470247 RTEL1-TNFRSF6BF6WH68 1400 aa17.01■□□□□ 0.31
SREBF1-209ENST00000470247 NCOA1Q15788 1441 aa17.01■□□□□ 0.31
SREBF1-209ENST00000470247 MAST1Q9Y2H9 1570 aa17.01■□□□□ 0.31
SREBF1-209ENST00000470247 ROCK1Q13464 1354 aa17.01■□□□□ 0.31
SREBF1-209ENST00000470247 ADGRL2O95490 1459 aa17■□□□□ 0.31
SREBF1-209ENST00000470247 CROCC2H7BZ55 1655 aa17■□□□□ 0.31
SREBF1-209ENST00000470247 MLH3Q9UHC1 1453 aa16.99■□□□□ 0.31
SREBF1-209ENST00000470247 AEBP2Q6ZN18 517 aaPredicted RBP16.99■□□□□ 0.31
SREBF1-209ENST00000470247 RRP7BPQ9NSQ0 103 aa16.99■□□□□ 0.31
SREBF1-209ENST00000470247 ZMYM4Q5VZL5 1548 aa16.96■□□□□ 0.31
SREBF1-209ENST00000470247 ZFYVE16Q7Z3T8 1539 aa16.96■□□□□ 0.31
SREBF1-209ENST00000470247 ANKRD30AQ9BXX3 1397 aa16.96■□□□□ 0.31
SREBF1-209ENST00000470247 INO80Q9ULG1 1556 aaPredicted RBP16.96■□□□□ 0.31
SREBF1-209ENST00000470247 KIDINS220Q9ULH0 1771 aa16.96■□□□□ 0.31
SREBF1-209ENST00000470247 NAIPQ13075 1403 aa16.96■□□□□ 0.3
SREBF1-209ENST00000470247 ATP7AQ04656 1500 aa16.95■□□□□ 0.3
SREBF1-209ENST00000470247 HFM1A2PYH4 1435 aa16.95■□□□□ 0.3
SREBF1-209ENST00000470247 YEATS2Q9ULM3 1422 aa16.95■□□□□ 0.3
SREBF1-209ENST00000470247 MAGI2Q86UL8 1455 aa16.93■□□□□ 0.3
SREBF1-209ENST00000470247 KDM6BO15054 1643 aa16.93■□□□□ 0.3
SREBF1-209ENST00000470247 HECW2Q9P2P5 1572 aa16.93■□□□□ 0.3
SREBF1-209ENST00000470247 KIF15Q9NS87 1388 aa16.92■□□□□ 0.3
SREBF1-209ENST00000470247 PLXNC1O60486 1568 aa16.92■□□□□ 0.3
SREBF1-209ENST00000470247 SETD5Q9C0A6 1442 aa16.91■□□□□ 0.3
SREBF1-209ENST00000470247 ADGBQ8N7X0 1667 aa16.91■□□□□ 0.3
SREBF1-209ENST00000470247 MYT1LQ9UL68 1186 aa16.9■□□□□ 0.3
SREBF1-209ENST00000470247 DHX29Q7Z478 1369 aaKnown RBP16.89■□□□□ 0.3
SREBF1-209ENST00000470247 DIP2CQ9Y2E4 1556 aa16.88■□□□□ 0.29
SREBF1-209ENST00000470247 ABCA6Q8N139 1617 aa16.88■□□□□ 0.29
SREBF1-209ENST00000470247 ANKRD50Q9ULJ7 1429 aa16.87■□□□□ 0.29
SREBF1-209ENST00000470247 DUOX2Q9NRD8 1548 aa16.87■□□□□ 0.29
SREBF1-209ENST00000470247 HRCP23327 699 aa16.87■□□□□ 0.29
SREBF1-209ENST00000470247 RAB3GAP2Q9H2M9 1393 aa16.87■□□□□ 0.29
SREBF1-209ENST00000470247 ATP10AO60312 1499 aa16.86■□□□□ 0.29
SREBF1-209ENST00000470247 A2MP01023 1474 aa16.86■□□□□ 0.29
SREBF1-209ENST00000470247 GCC2Q8IWJ2 1684 aa16.85■□□□□ 0.29
SREBF1-209ENST00000470247 ARHGEF40Q8TER5 1519 aa16.83■□□□□ 0.28
SREBF1-209ENST00000470247 ERBINQ96RT1 1412 aa16.83■□□□□ 0.28
SREBF1-209ENST00000470247 REREQ9P2R6 1566 aa16.81■□□□□ 0.28
SREBF1-209ENST00000470247 KIF3BO15066 747 aa16.8■□□□□ 0.28
SREBF1-209ENST00000470247 SIGLEC1Q9BZZ2 1709 aa16.79■□□□□ 0.28
SREBF1-209ENST00000470247 AGLP35573 1532 aa16.77■□□□□ 0.28
SREBF1-209ENST00000470247 EIF2AK4Q9P2K8 1649 aaKnown RBP16.75■□□□□ 0.27
SREBF1-209ENST00000470247 BCORL1Q5H9F3 1711 aa16.74■□□□□ 0.27
SREBF1-209ENST00000470247 TRIM52Q96A61 297 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms