RNA–Protein interactions for RNA: ENST00000470068.2

CCDC144A-212, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 1 (best)

Gene CCDC144A, Length 5,142 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-212ENST00000470068 PROSER2Q86WR7 435 aaPredicted RBP7.95□□□□□ -1.14
CCDC144A-212ENST00000470068 CCNB3Q8WWL7 1395 aa7.94□□□□□ -1.14
CCDC144A-212ENST00000470068 CADPSQ9ULU8 1353 aa7.94□□□□□ -1.14
CCDC144A-212ENST00000470068 PAXIP1Q6ZW49 1069 aaPredicted RBP7.94□□□□□ -1.14
CCDC144A-212ENST00000470068 WWC1Q8IX03 1113 aa7.94□□□□□ -1.14
CCDC144A-212ENST00000470068 BCL11AQ9H165 835 aa7.94□□□□□ -1.14
CCDC144A-212ENST00000470068 RBM33Q96EV2 1170 aaKnown RBP7.94□□□□□ -1.14
CCDC144A-212ENST00000470068 CERKQ8TCT0 537 aa7.93□□□□□ -1.14
CCDC144A-212ENST00000470068 CC2D2AQ9P2K1 1620 aa7.93□□□□□ -1.14
CCDC144A-212ENST00000470068 VPS8Q8N3P4 1428 aa7.93□□□□□ -1.14
CCDC144A-212ENST00000470068 EVA1CP58658 441 aa7.93□□□□□ -1.14
CCDC144A-212ENST00000470068 EIF3AQ14152 1382 aaKnown RBP7.92□□□□□ -1.14
CCDC144A-212ENST00000470068 SOCS7O14512 581 aa7.92□□□□□ -1.14
CCDC144A-212ENST00000470068 CSB-PGBD3P0DP91 1061 aa7.92□□□□□ -1.14
CCDC144A-212ENST00000470068 PDE3BQ13370 1112 aa7.92□□□□□ -1.14
CCDC144A-212ENST00000470068 TOP2AP11388 1531 aaKnown RBP7.92□□□□□ -1.14
CCDC144A-212ENST00000470068 EFCAB2Q5VUJ9 269 aa7.91□□□□□ -1.14
CCDC144A-212ENST00000470068 PPP4R2Q9NY27 417 aa7.91□□□□□ -1.14
CCDC144A-212ENST00000470068 TMX4Q9H1E5 349 aaPredicted RBP7.91□□□□□ -1.14
CCDC144A-212ENST00000470068 UACAQ9BZF9 1416 aa7.9□□□□□ -1.14
CCDC144A-212ENST00000470068 NBPF8Q3BBV2 869 aa7.9□□□□□ -1.14
CCDC144A-212ENST00000470068 NBPF14Q5TI25 921 aa7.9□□□□□ -1.14
CCDC144A-212ENST00000470068 SENP3-EIF4A1A0A087X0R7 540 aa7.9□□□□□ -1.14
CCDC144A-212ENST00000470068 PPP6R1Q9UPN7 881 aa7.9□□□□□ -1.14
CCDC144A-212ENST00000470068 HNRNPUQ00839 825 aaKnown RBP eCLIP7.9□□□□□ -1.15
CCDC144A-212ENST00000470068 HTATSF1O43719 755 aaKnown RBP7.89□□□□□ -1.15
CCDC144A-212ENST00000470068 RALBP1Q15311 655 aa7.89□□□□□ -1.15
CCDC144A-212ENST00000470068 ARHGAP35Q9NRY4 1499 aa7.89□□□□□ -1.15
CCDC144A-212ENST00000470068 KTN1Q86UP2 1357 aaKnown RBP7.89□□□□□ -1.15
CCDC144A-212ENST00000470068 MRS2Q9HD23 443 aa7.89□□□□□ -1.15
CCDC144A-212ENST00000470068 SOGA1O94964 1423 aa7.88□□□□□ -1.15
CCDC144A-212ENST00000470068 PTPRGP23470 1445 aa7.88□□□□□ -1.15
CCDC144A-212ENST00000470068 SCAPERQ9BY12 1400 aa7.88□□□□□ -1.15
CCDC144A-212ENST00000470068 PAK3O75914 559 aaPredicted RBP7.88□□□□□ -1.15
CCDC144A-212ENST00000470068 ANKLE2Q86XL3 938 aa7.88□□□□□ -1.15
CCDC144A-212ENST00000470068 KNSTRNQ9Y448 316 aa7.88□□□□□ -1.15
CCDC144A-212ENST00000470068 HNRNPMP52272 730 aaKnown RBP eCLIP7.88□□□□□ -1.15
CCDC144A-212ENST00000470068 ZRSR1Q15695 479 aaKnown RBP7.88□□□□□ -1.15
CCDC144A-212ENST00000470068 IL27Q8NEV9 243 aa7.87□□□□□ -1.15
CCDC144A-212ENST00000470068 ADAMTS2O95450 1211 aa7.87□□□□□ -1.15
CCDC144A-212ENST00000470068 CCDC34Q96HJ3 373 aa7.87□□□□□ -1.15
CCDC144A-212ENST00000470068 SETD5Q9C0A6 1442 aa7.87□□□□□ -1.15
CCDC144A-212ENST00000470068 HMGB2P26583 209 aaKnown RBP7.86□□□□□ -1.15
CCDC144A-212ENST00000470068 MCCP23508 829 aa7.86□□□□□ -1.15
CCDC144A-212ENST00000470068 TMF1P82094 1093 aa7.86□□□□□ -1.15
CCDC144A-212ENST00000470068 IPO8O15397 1037 aaKnown RBP7.86□□□□□ -1.15
CCDC144A-212ENST00000470068 PPARGC1BQ86YN6 1023 aaKnown RBP7.86□□□□□ -1.15
CCDC144A-212ENST00000470068 BEGAINQ9BUH8 593 aa7.86□□□□□ -1.15
CCDC144A-212ENST00000470068 CARMIL1Q5VZK9 1371 aa7.85□□□□□ -1.15
CCDC144A-212ENST00000470068 CFDP1Q9UEE9 299 aaPredicted RBP7.85□□□□□ -1.15
CCDC144A-212ENST00000470068 CSPP1Q1MSJ5 1256 aa7.85□□□□□ -1.15
CCDC144A-212ENST00000470068 CCDC18Q5T9S5 1454 aa7.84□□□□□ -1.15
CCDC144A-212ENST00000470068 GPR162Q16538 588 aa7.84□□□□□ -1.15
CCDC144A-212ENST00000470068 FKBP8Q14318 412 aa7.84□□□□□ -1.15
CCDC144A-212ENST00000470068 ANKRD30AQ9BXX3 1397 aa7.84□□□□□ -1.15
CCDC144A-212ENST00000470068 EIF4G1Q04637 1599 aaKnown RBP7.84□□□□□ -1.15
CCDC144A-212ENST00000470068 MAPK8IP3Q9UPT6 1336 aa7.83□□□□□ -1.16
CCDC144A-212ENST00000470068 THEMISQ8N1K5 641 aaPredicted RBP7.83□□□□□ -1.16
CCDC144A-212ENST00000470068 WASHC2CQ9Y4E1 1318 aa7.83□□□□□ -1.16
CCDC144A-212ENST00000470068 LMOD3Q0VAK6 560 aa7.83□□□□□ -1.16
CCDC144A-212ENST00000470068 MRC2Q9UBG0 1479 aa7.81□□□□□ -1.16
CCDC144A-212ENST00000470068 SYAP1Q96A49 352 aaPredicted RBP7.81□□□□□ -1.16
CCDC144A-212ENST00000470068 BAG6P46379 1132 aa7.81□□□□□ -1.16
CCDC144A-212ENST00000470068 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.81□□□□□ -1.16
CCDC144A-212ENST00000470068 POGKQ9P215 609 aa7.81□□□□□ -1.16
CCDC144A-212ENST00000470068 TCERG1O14776 1098 aaKnown RBP7.81□□□□□ -1.16
CCDC144A-212ENST00000470068 CHAF1AQ13111 956 aaPredicted RBP7.8□□□□□ -1.16
CCDC144A-212ENST00000470068 CNGB1Q14028 1251 aaPredicted RBP7.8□□□□□ -1.16
CCDC144A-212ENST00000470068 C8orf37Q96NL8 207 aa7.8□□□□□ -1.16
CCDC144A-212ENST00000470068 CUX1P39880 1505 aa7.8□□□□□ -1.16
CCDC144A-212ENST00000470068 RXRBP28702 533 aa7.8□□□□□ -1.16
CCDC144A-212ENST00000470068 RAPGEF2Q9Y4G8 1499 aa7.8□□□□□ -1.16
CCDC144A-212ENST00000470068 BCL11BQ9C0K0 894 aaPredicted RBP7.8□□□□□ -1.16
CCDC144A-212ENST00000470068 DHX8Q14562 1220 aaKnown RBP7.79□□□□□ -1.16
CCDC144A-212ENST00000470068 KIF3AQ9Y496 699 aa7.79□□□□□ -1.16
CCDC144A-212ENST00000470068 FANCD2Q9BXW9 1451 aa7.79□□□□□ -1.16
CCDC144A-212ENST00000470068 GRM1Q13255 1194 aa7.78□□□□□ -1.16
CCDC144A-212ENST00000470068 ZNF772Q68DY9 489 aaPredicted RBP7.78□□□□□ -1.16
CCDC144A-212ENST00000470068 PMFBP1Q8TBY8 1022 aa7.78□□□□□ -1.16
CCDC144A-212ENST00000470068 CEBPAP49715 358 aaPredicted RBP7.78□□□□□ -1.16
CCDC144A-212ENST00000470068 DDX10Q13206 875 aaKnown RBP7.77□□□□□ -1.16
CCDC144A-212ENST00000470068 NESP48681 1621 aa7.77□□□□□ -1.17
CCDC144A-212ENST00000470068 YY1P25490 414 aa7.77□□□□□ -1.17
CCDC144A-212ENST00000470068 KIF3BO15066 747 aa7.77□□□□□ -1.17
CCDC144A-212ENST00000470068 RAPGEF3O95398 923 aa7.76□□□□□ -1.17
CCDC144A-212ENST00000470068 FTSJ3Q8IY81 847 aaKnown RBP7.76□□□□□ -1.17
CCDC144A-212ENST00000470068 GBP4Q96PP9 640 aa7.76□□□□□ -1.17
CCDC144A-212ENST00000470068 CARD11Q9BXL7 1154 aa7.76□□□□□ -1.17
CCDC144A-212ENST00000470068 SOX12O15370 315 aa7.76□□□□□ -1.17
CCDC144A-212ENST00000470068 MIA2Q96PC5 1412 aa7.76□□□□□ -1.17
CCDC144A-212ENST00000470068 NUTM2FA1L443 756 aa7.76□□□□□ -1.17
CCDC144A-212ENST00000470068 PDIA4P13667 645 aaKnown RBP7.75□□□□□ -1.17
CCDC144A-212ENST00000470068 WASHC2AQ641Q2 1341 aa7.75□□□□□ -1.17
CCDC144A-212ENST00000470068 AQRO60306 1485 aaKnown RBP eCLIP7.75□□□□□ -1.17
CCDC144A-212ENST00000470068 PHF14O94880 888 aa7.75□□□□□ -1.17
CCDC144A-212ENST00000470068 TPM4P67936 248 aa7.75□□□□□ -1.17
CCDC144A-212ENST00000470068 LRRFIP1Q32MZ4 808 aaKnown RBP7.75□□□□□ -1.17
CCDC144A-212ENST00000470068 SYTL4Q96C24 671 aaPredicted RBP7.75□□□□□ -1.17
CCDC144A-212ENST00000470068 TXNDC2Q86VQ3 553 aa7.74□□□□□ -1.17
CCDC144A-212ENST00000470068 RWDD1Q9H446 243 aaPredicted RBP7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms