RNA–Protein interactions for RNA: ENST00000469923.5

SHROOM3-203, Transcript of shroom family member 3, humanhuman

TSL 3

Gene SHROOM3, Length 764 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-203ENST00000469923 ARHGEF12Q9NZN5 1544 aa14.91□□□□□ -0.02
SHROOM3-203ENST00000469923 ZNF644Q9H582 1327 aaPredicted RBP14.9□□□□□ -0.02
SHROOM3-203ENST00000469923 HNRNPMP52272 730 aaKnown RBP eCLIP14.89□□□□□ -0.03
SHROOM3-203ENST00000469923 CEP162Q5TB80 1403 aa14.88□□□□□ -0.03
SHROOM3-203ENST00000469923 TRAPPC8Q9Y2L5 1435 aa14.88□□□□□ -0.03
SHROOM3-203ENST00000469923 RICTORQ6R327 1708 aa14.87□□□□□ -0.03
SHROOM3-203ENST00000469923 CEBPAP49715 358 aaPredicted RBP14.87□□□□□ -0.03
SHROOM3-203ENST00000469923 POGZQ7Z3K3 1410 aa14.85□□□□□ -0.03
SHROOM3-203ENST00000469923 MYT1LQ9UL68 1186 aa14.84□□□□□ -0.03
SHROOM3-203ENST00000469923 PTPRMP28827 1452 aa14.83□□□□□ -0.03
SHROOM3-203ENST00000469923 ARHGAP5Q13017 1502 aa14.83□□□□□ -0.04
SHROOM3-203ENST00000469923 KANK4Q5T7N3 995 aaPredicted RBP14.83□□□□□ -0.04
SHROOM3-203ENST00000469923 GPATCH8Q9UKJ3 1502 aaKnown RBP14.82□□□□□ -0.04
SHROOM3-203ENST00000469923 ADAMTSL3P82987 1691 aa14.82□□□□□ -0.04
SHROOM3-203ENST00000469923 CDC42BPBQ9Y5S2 1711 aa14.82□□□□□ -0.04
SHROOM3-203ENST00000469923 FYCO1Q9BQS8 1478 aa14.82□□□□□ -0.04
SHROOM3-203ENST00000469923 HSPA2P54652 639 aa14.81□□□□□ -0.04
SHROOM3-203ENST00000469923 HECW2Q9P2P5 1572 aa14.8□□□□□ -0.04
SHROOM3-203ENST00000469923 ZFYVE16Q7Z3T8 1539 aa14.79□□□□□ -0.04
SHROOM3-203ENST00000469923 MADDQ8WXG6 1647 aa14.79□□□□□ -0.04
SHROOM3-203ENST00000469923 BCORL1Q5H9F3 1711 aa14.78□□□□□ -0.04
SHROOM3-203ENST00000469923 ARHGEF40Q8TER5 1519 aa14.78□□□□□ -0.04
SHROOM3-203ENST00000469923 ATP10AO60312 1499 aa14.78□□□□□ -0.04
SHROOM3-203ENST00000469923 CCDC18Q5T9S5 1454 aa14.78□□□□□ -0.04
SHROOM3-203ENST00000469923 CFDP1Q9UEE9 299 aaPredicted RBP14.78□□□□□ -0.04
SHROOM3-203ENST00000469923 MYO5CQ9NQX4 1742 aa14.78□□□□□ -0.04
SHROOM3-203ENST00000469923 ZMYM4Q5VZL5 1548 aa14.76□□□□□ -0.05
SHROOM3-203ENST00000469923 MTUS2Q5JR59 1369 aa14.76□□□□□ -0.05
SHROOM3-203ENST00000469923 CCNB3Q8WWL7 1395 aa14.74□□□□□ -0.05
SHROOM3-203ENST00000469923 ILDR1Q86SU0 546 aaPredicted RBP14.74□□□□□ -0.05
SHROOM3-203ENST00000469923 CDC42BPAQ5VT25 1732 aa14.74□□□□□ -0.05
SHROOM3-203ENST00000469923 MAGI2Q86UL8 1455 aa14.73□□□□□ -0.05
SHROOM3-203ENST00000469923 SAMD9LQ8IVG5 1584 aa14.73□□□□□ -0.05
SHROOM3-203ENST00000469923 CFAP74Q9C0B2 1584 aa14.73□□□□□ -0.05
SHROOM3-203ENST00000469923 RIMS1Q86UR5 1692 aaKnown RBP14.72□□□□□ -0.05
SHROOM3-203ENST00000469923 ABCC1P33527 1531 aa14.71□□□□□ -0.05
SHROOM3-203ENST00000469923 SPAG9O60271 1321 aaKnown RBP14.71□□□□□ -0.05
SHROOM3-203ENST00000469923 PREX2Q70Z35 1606 aa14.71□□□□□ -0.05
SHROOM3-203ENST00000469923 ZNF518AQ6AHZ1 1483 aa14.7□□□□□ -0.06
SHROOM3-203ENST00000469923 C9orf84Q5VXU9 1444 aa14.7□□□□□ -0.06
SHROOM3-203ENST00000469923 KDM5CP41229 1560 aa14.69□□□□□ -0.06
SHROOM3-203ENST00000469923 DIP2CQ9Y2E4 1556 aa14.69□□□□□ -0.06
SHROOM3-203ENST00000469923 SYCP2Q9BX26 1530 aa14.69□□□□□ -0.06
SHROOM3-203ENST00000469923 ABCA6Q8N139 1617 aa14.69□□□□□ -0.06
SHROOM3-203ENST00000469923 MLH3Q9UHC1 1453 aa14.69□□□□□ -0.06
SHROOM3-203ENST00000469923 LMTK3Q96Q04 1460 aa14.67□□□□□ -0.06
SHROOM3-203ENST00000469923 MBD5Q9P267 1494 aa14.67□□□□□ -0.06
SHROOM3-203ENST00000469923 KIDINS220Q9ULH0 1771 aa14.66□□□□□ -0.06
SHROOM3-203ENST00000469923 ITSN2Q9NZM3 1697 aa14.66□□□□□ -0.06
SHROOM3-203ENST00000469923 NCOA2Q15596 1464 aa14.66□□□□□ -0.06
SHROOM3-203ENST00000469923 VPS8Q8N3P4 1428 aa14.66□□□□□ -0.06
SHROOM3-203ENST00000469923 TIAM1Q13009 1591 aa14.65□□□□□ -0.06
SHROOM3-203ENST00000469923 GGT6Q6P531 493 aa14.65□□□□□ -0.06
SHROOM3-203ENST00000469923 KIAA1107Q9UPP5 1409 aa14.63□□□□□ -0.07
SHROOM3-203ENST00000469923 PPARGC1BQ86YN6 1023 aaKnown RBP14.62□□□□□ -0.07
SHROOM3-203ENST00000469923 LRRC9Q6ZRR7 1453 aa14.61□□□□□ -0.07
SHROOM3-203ENST00000469923 EHBP1L1Q8N3D4 1523 aa14.59□□□□□ -0.07
SHROOM3-203ENST00000469923 FER1L4A9Z1Z3 1794 aa14.58□□□□□ -0.08
SHROOM3-203ENST00000469923 FBXO31Q5XUX0 539 aaPredicted RBP14.58□□□□□ -0.08
SHROOM3-203ENST00000469923 ZMYM3Q14202 1370 aa14.57□□□□□ -0.08
SHROOM3-203ENST00000469923 SUPT6HQ7KZ85 1726 aaKnown RBP14.56□□□□□ -0.08
SHROOM3-203ENST00000469923 KIF3BO15066 747 aa14.56□□□□□ -0.08
SHROOM3-203ENST00000469923 A2MP01023 1474 aa14.56□□□□□ -0.08
SHROOM3-203ENST00000469923 CAMSAP2Q08AD1 1489 aa14.56□□□□□ -0.08
SHROOM3-203ENST00000469923 AGLP35573 1532 aa14.56□□□□□ -0.08
SHROOM3-203ENST00000469923 ATP7AQ04656 1500 aa14.56□□□□□ -0.08
SHROOM3-203ENST00000469923 ESF1Q9H501 851 aaKnown RBP14.54□□□□□ -0.08
SHROOM3-203ENST00000469923 PLEKHH2Q8IVE3 1493 aa14.53□□□□□ -0.08
SHROOM3-203ENST00000469923 DHX29Q7Z478 1369 aaKnown RBP14.53□□□□□ -0.08
SHROOM3-203ENST00000469923 REREQ9P2R6 1566 aa14.52□□□□□ -0.08
SHROOM3-203ENST00000469923 NCKAP5LQ9HCH0 1330 aa14.52□□□□□ -0.08
SHROOM3-203ENST00000469923 CHIC2Q9UKJ5 165 aa14.52□□□□□ -0.09
SHROOM3-203ENST00000469923 INO80Q9ULG1 1556 aaPredicted RBP14.51□□□□□ -0.09
SHROOM3-203ENST00000469923 C3P01024 1663 aa14.5□□□□□ -0.09
SHROOM3-203ENST00000469923 TSPY4P0CV99 314 aa14.49□□□□□ -0.09
SHROOM3-203ENST00000469923 TSPY10P0CW01 314 aa14.49□□□□□ -0.09
SHROOM3-203ENST00000469923 RRP7BPQ9NSQ0 103 aa14.49□□□□□ -0.09
SHROOM3-203ENST00000469923 PLXNC1O60486 1568 aa14.48□□□□□ -0.09
SHROOM3-203ENST00000469923 RTEL1-TNFRSF6BF6WH68 1400 aa14.48□□□□□ -0.09
SHROOM3-203ENST00000469923 CCDC141Q6ZP82 1450 aa14.47□□□□□ -0.09
SHROOM3-203ENST00000469923 PTPRKQ15262 1439 aa14.47□□□□□ -0.09
SHROOM3-203ENST00000469923 MYOM3Q5VTT5 1437 aa14.47□□□□□ -0.09
SHROOM3-203ENST00000469923 APLP2Q06481 763 aa14.46□□□□□ -0.09
SHROOM3-203ENST00000469923 ABCC5O15440 1437 aa14.46□□□□□ -0.09
SHROOM3-203ENST00000469923 STRCQ7RTU9 1775 aa14.45□□□□□ -0.1
SHROOM3-203ENST00000469923 RSPH4AQ5TD94 716 aa14.45□□□□□ -0.1
SHROOM3-203ENST00000469923 CLTCQ00610 1675 aaKnown RBP14.45□□□□□ -0.1
SHROOM3-203ENST00000469923 MAP3K1Q13233 1512 aa14.45□□□□□ -0.1
SHROOM3-203ENST00000469923 UHRF1BP1Q6BDS2 1440 aa14.44□□□□□ -0.1
SHROOM3-203ENST00000469923 SETD1BQ9UPS6 1966 aaKnown RBP14.43□□□□□ -0.1
SHROOM3-203ENST00000469923 WASHC2CQ9Y4E1 1318 aa14.43□□□□□ -0.1
SHROOM3-203ENST00000469923 CERKQ8TCT0 537 aa14.43□□□□□ -0.1
SHROOM3-203ENST00000469923 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.42□□□□□ -0.1
SHROOM3-203ENST00000469923 ADGBQ8N7X0 1667 aa14.42□□□□□ -0.1
SHROOM3-203ENST00000469923 CNTLNQ9NXG0 1405 aa14.41□□□□□ -0.1
SHROOM3-203ENST00000469923 FAM50AQ14320 339 aaKnown RBP14.41□□□□□ -0.1
SHROOM3-203ENST00000469923 FBXO41Q8TF61 875 aa14.41□□□□□ -0.1
SHROOM3-203ENST00000469923 MIA2Q96PC5 1412 aa14.4□□□□□ -0.1
SHROOM3-203ENST00000469923 PREX1Q8TCU6 1659 aa14.39□□□□□ -0.11
SHROOM3-203ENST00000469923 ARHGEF5Q12774 1597 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms