RNA–Protein interactions for RNA: ENST00000469354.1

EPHA4-211, Transcript of EPH receptor A4, humanhuman

TSL 2

Gene EPHA4, Length 2,893 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-211ENST00000469354 ZNF777Q9ULD5 760 aaPredicted RBP12.52□□□□□ -0.41
EPHA4-211ENST00000469354 TCOF1Q13428 1488 aaKnown RBP12.51□□□□□ -0.41
EPHA4-211ENST00000469354 CFDP1Q9UEE9 299 aaPredicted RBP12.51□□□□□ -0.41
EPHA4-211ENST00000469354 NAIPQ13075 1403 aa12.51□□□□□ -0.41
EPHA4-211ENST00000469354 ABCA8O94911 1581 aa12.49□□□□□ -0.41
EPHA4-211ENST00000469354 ATP10BO94823 1461 aa12.49□□□□□ -0.41
EPHA4-211ENST00000469354 TRIM52Q96A61 297 aa12.48□□□□□ -0.41
EPHA4-211ENST00000469354 KIF14Q15058 1648 aa12.46□□□□□ -0.41
EPHA4-211ENST00000469354 TAOK2Q9UL54 1235 aa12.46□□□□□ -0.41
EPHA4-211ENST00000469354 ERCC6L2Q5T890 1561 aa12.45□□□□□ -0.42
EPHA4-211ENST00000469354 UACAQ9BZF9 1416 aa12.45□□□□□ -0.42
EPHA4-211ENST00000469354 GPATCH8Q9UKJ3 1502 aaKnown RBP12.45□□□□□ -0.42
EPHA4-211ENST00000469354 DAPK1P53355 1430 aa12.44□□□□□ -0.42
EPHA4-211ENST00000469354 ABCC5O15440 1437 aa12.43□□□□□ -0.42
EPHA4-211ENST00000469354 SHROOM2Q13796 1616 aa12.43□□□□□ -0.42
EPHA4-211ENST00000469354 PODXL2Q9NZ53 605 aa12.42□□□□□ -0.42
EPHA4-211ENST00000469354 CAMSAP2Q08AD1 1489 aa12.42□□□□□ -0.42
EPHA4-211ENST00000469354 ADCY10Q96PN6 1610 aa12.4□□□□□ -0.42
EPHA4-211ENST00000469354 ITSN2Q9NZM3 1697 aa12.4□□□□□ -0.43
EPHA4-211ENST00000469354 AKNAQ7Z591 1439 aa12.39□□□□□ -0.43
EPHA4-211ENST00000469354 KDM6BO15054 1643 aa12.39□□□□□ -0.43
EPHA4-211ENST00000469354 DNMT1P26358 1616 aaKnown RBP12.39□□□□□ -0.43
EPHA4-211ENST00000469354 KCNH8Q96L42 1107 aa12.39□□□□□ -0.43
EPHA4-211ENST00000469354 CLASP1Q7Z460 1538 aa12.38□□□□□ -0.43
EPHA4-211ENST00000469354 GCC2Q8IWJ2 1684 aa12.38□□□□□ -0.43
EPHA4-211ENST00000469354 ROCK1Q13464 1354 aa12.38□□□□□ -0.43
EPHA4-211ENST00000469354 ABCC10Q5T3U5 1492 aa12.37□□□□□ -0.43
EPHA4-211ENST00000469354 TONSLQ96HA7 1378 aa12.37□□□□□ -0.43
EPHA4-211ENST00000469354 MPHOSPH9Q99550 1183 aa12.37□□□□□ -0.43
EPHA4-211ENST00000469354 FOXD1Q16676 465 aa12.36□□□□□ -0.43
EPHA4-211ENST00000469354 HNRNPMP52272 730 aaKnown RBP eCLIP12.36□□□□□ -0.43
EPHA4-211ENST00000469354 CDC42BPAQ5VT25 1732 aa12.35□□□□□ -0.43
EPHA4-211ENST00000469354 TPRNQ4KMQ1 711 aa12.35□□□□□ -0.43
EPHA4-211ENST00000469354 ABCC2Q92887 1545 aa12.35□□□□□ -0.43
EPHA4-211ENST00000469354 PPP1R15AO75807 674 aaPredicted RBP12.35□□□□□ -0.43
EPHA4-211ENST00000469354 TSPY4P0CV99 314 aa12.34□□□□□ -0.43
EPHA4-211ENST00000469354 TSPY10P0CW01 314 aa12.34□□□□□ -0.43
EPHA4-211ENST00000469354 HOMEZQ8IX15 550 aa12.34□□□□□ -0.43
EPHA4-211ENST00000469354 MIER1Q8N108 512 aa12.34□□□□□ -0.43
EPHA4-211ENST00000469354 NCOA1Q15788 1441 aa12.34□□□□□ -0.43
EPHA4-211ENST00000469354 SLC4A1APQ9BWU0 796 aaKnown RBP12.33□□□□□ -0.44
EPHA4-211ENST00000469354 ANKRD30AQ9BXX3 1397 aa12.32□□□□□ -0.44
EPHA4-211ENST00000469354 DENND4BO75064 1496 aaPredicted RBP12.31□□□□□ -0.44
EPHA4-211ENST00000469354 OSCARQ8IYS5 282 aa12.3□□□□□ -0.44
EPHA4-211ENST00000469354 AEBP2Q6ZN18 517 aaPredicted RBP12.3□□□□□ -0.44
EPHA4-211ENST00000469354 HIRIP3Q9BW71 556 aaPredicted RBP12.3□□□□□ -0.44
EPHA4-211ENST00000469354 C9orf84Q5VXU9 1444 aa12.3□□□□□ -0.44
EPHA4-211ENST00000469354 ACIN1Q9UKV3 1341 aaKnown RBP12.28□□□□□ -0.44
EPHA4-211ENST00000469354 ARHGAP5Q13017 1502 aa12.28□□□□□ -0.44
EPHA4-211ENST00000469354 TTC37Q6PGP7 1564 aa12.28□□□□□ -0.44
EPHA4-211ENST00000469354 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.28□□□□□ -0.44
EPHA4-211ENST00000469354 ANKRD50Q9ULJ7 1429 aa12.27□□□□□ -0.44
EPHA4-211ENST00000469354 CDC42BPBQ9Y5S2 1711 aa12.27□□□□□ -0.44
EPHA4-211ENST00000469354 ADGRL2O95490 1459 aa12.27□□□□□ -0.45
EPHA4-211ENST00000469354 ADGBQ8N7X0 1667 aa12.27□□□□□ -0.45
EPHA4-211ENST00000469354 ZCCHC11Q5TAX3 1644 aaKnown RBP12.27□□□□□ -0.45
EPHA4-211ENST00000469354 CROCC2H7BZ55 1655 aa12.27□□□□□ -0.45
EPHA4-211ENST00000469354 UHRF1BP1LA0JNW5 1464 aa12.26□□□□□ -0.45
EPHA4-211ENST00000469354 PREX2Q70Z35 1606 aa12.26□□□□□ -0.45
EPHA4-211ENST00000469354 MBD5Q9P267 1494 aa12.26□□□□□ -0.45
EPHA4-211ENST00000469354 KDM5BQ9UGL1 1544 aa12.25□□□□□ -0.45
EPHA4-211ENST00000469354 YTHDC1Q96MU7 727 aaKnown RBP12.25□□□□□ -0.45
EPHA4-211ENST00000469354 SAMD9LQ8IVG5 1584 aa12.25□□□□□ -0.45
EPHA4-211ENST00000469354 KIF15Q9NS87 1388 aa12.25□□□□□ -0.45
EPHA4-211ENST00000469354 RSPH4AQ5TD94 716 aa12.24□□□□□ -0.45
EPHA4-211ENST00000469354 ANKRD30BQ9BXX2 1392 aa12.24□□□□□ -0.45
EPHA4-211ENST00000469354 CCDC141Q6ZP82 1450 aa12.24□□□□□ -0.45
EPHA4-211ENST00000469354 SHANK2Q9UPX8 1470 aa12.24□□□□□ -0.45
EPHA4-211ENST00000469354 PKD2Q13563 968 aa12.24□□□□□ -0.45
EPHA4-211ENST00000469354 SYCP2Q9BX26 1530 aa12.23□□□□□ -0.45
EPHA4-211ENST00000469354 L3MBTL2Q969R5 705 aa12.23□□□□□ -0.45
EPHA4-211ENST00000469354 NUP155O75694 1391 aa12.23□□□□□ -0.45
EPHA4-211ENST00000469354 EFCAB2Q5VUJ9 269 aa12.23□□□□□ -0.45
EPHA4-211ENST00000469354 PZPP20742 1482 aa12.22□□□□□ -0.45
EPHA4-211ENST00000469354 ARHGEF5Q12774 1597 aa12.22□□□□□ -0.45
EPHA4-211ENST00000469354 MYO5CQ9NQX4 1742 aa12.21□□□□□ -0.45
EPHA4-211ENST00000469354 DDX10Q13206 875 aaKnown RBP12.21□□□□□ -0.45
EPHA4-211ENST00000469354 BCL11AQ9H165 835 aa12.21□□□□□ -0.45
EPHA4-211ENST00000469354 PLCH2O75038 1416 aa12.21□□□□□ -0.46
EPHA4-211ENST00000469354 NPM1P06748 294 aaKnown RBP eCLIP12.19□□□□□ -0.46
EPHA4-211ENST00000469354 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.19□□□□□ -0.46
EPHA4-211ENST00000469354 CENPBP07199 599 aaPredicted RBP12.18□□□□□ -0.46
EPHA4-211ENST00000469354 KIAA1107Q9UPP5 1409 aa12.18□□□□□ -0.46
EPHA4-211ENST00000469354 RPRD2Q5VT52 1461 aaKnown RBP12.18□□□□□ -0.46
EPHA4-211ENST00000469354 PLEKHH2Q8IVE3 1493 aa12.18□□□□□ -0.46
EPHA4-211ENST00000469354 WDR7Q9Y4E6 1490 aa12.17□□□□□ -0.46
EPHA4-211ENST00000469354 ARHGEF12Q9NZN5 1544 aa12.17□□□□□ -0.46
EPHA4-211ENST00000469354 AFAP1Q8N556 730 aa12.16□□□□□ -0.46
EPHA4-211ENST00000469354 ASXL2Q76L83 1435 aa12.15□□□□□ -0.46
EPHA4-211ENST00000469354 ZNF326Q5BKZ1 582 aaKnown RBP12.14□□□□□ -0.47
EPHA4-211ENST00000469354 MYT1LQ9UL68 1186 aa12.14□□□□□ -0.47
EPHA4-211ENST00000469354 NBPF8Q3BBV2 869 aa12.14□□□□□ -0.47
EPHA4-211ENST00000469354 TRAPPC8Q9Y2L5 1435 aa12.14□□□□□ -0.47
EPHA4-211ENST00000469354 HSPA5P11021 654 aaKnown RBP12.13□□□□□ -0.47
EPHA4-211ENST00000469354 PHF23Q9BUL5 403 aaPredicted RBP12.12□□□□□ -0.47
EPHA4-211ENST00000469354 SPAG9O60271 1321 aaKnown RBP12.12□□□□□ -0.47
EPHA4-211ENST00000469354 EIF4G2P78344 907 aaKnown RBP eCLIP12.12□□□□□ -0.47
EPHA4-211ENST00000469354 TEX14Q8IWB6 1497 aa12.11□□□□□ -0.47
EPHA4-211ENST00000469354 ABCC1P33527 1531 aa12.11□□□□□ -0.47
EPHA4-211ENST00000469354 MAST1Q9Y2H9 1570 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms