RNA–Protein interactions for RNA: ENST00000469222.5

SAG-208, Transcript of S-antigen visual arrestin, human

TSL 2

Gene SAG, Length 4,984 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SAG-208	ENST00000469222	SAFB2	Q14151	953 aa	Known RBP eCLIP	13.78	□□□□□ -0.2
SAG-208	ENST00000469222	MLEC	Q14165	292 aa		13.76	□□□□□ -0.21
SAG-208	ENST00000469222	DRC7	Q8IY82	874 aa		13.76	□□□□□ -0.21
SAG-208	ENST00000469222	SPRYD3	Q8NCJ5	442 aa		13.76	□□□□□ -0.21
SAG-208	ENST00000469222	KTN1	Q86UP2	1357 aa	Known RBP	13.75	□□□□□ -0.21
SAG-208	ENST00000469222	HSPA5	P11021	654 aa	Known RBP	13.75	□□□□□ -0.21
SAG-208	ENST00000469222	KIAA1211	Q6ZU35	1233 aa		13.75	□□□□□ -0.21
SAG-208	ENST00000469222	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	13.75	□□□□□ -0.21
SAG-208	ENST00000469222	APBB1	O00213	710 aa		13.74	□□□□□ -0.21
SAG-208	ENST00000469222	GNL2	Q13823	731 aa	Known RBP	13.73	□□□□□ -0.21
SAG-208	ENST00000469222	CALD1	Q05682	793 aa	Known RBP	13.73	□□□□□ -0.21
SAG-208	ENST00000469222	ISY1	Q9ULR0	285 aa	Known RBP	13.73	□□□□□ -0.21
SAG-208	ENST00000469222	PKD2	Q13563	968 aa		13.73	□□□□□ -0.21
SAG-208	ENST00000469222	CARMIL1	Q5VZK9	1371 aa		13.72	□□□□□ -0.21
SAG-208	ENST00000469222	GBP4	Q96PP9	640 aa		13.72	□□□□□ -0.21
SAG-208	ENST00000469222	ERCC6	Q03468	1493 aa		13.72	□□□□□ -0.21
SAG-208	ENST00000469222	U2AF1L5	P0DN76	240 aa	Predicted RBP	13.72	□□□□□ -0.21
SAG-208	ENST00000469222	U2AF1	Q01081	240 aa	Known RBP eCLIP	13.72	□□□□□ -0.21
SAG-208	ENST00000469222	CLSTN1	O94985	981 aa		13.72	□□□□□ -0.21
SAG-208	ENST00000469222	GGT6	Q6P531	493 aa		13.72	□□□□□ -0.21
SAG-208	ENST00000469222	STK26	Q9P289	416 aa		13.72	□□□□□ -0.21
SAG-208	ENST00000469222	RWDD1	Q9H446	243 aa	Predicted RBP	13.71	□□□□□ -0.21
SAG-208	ENST00000469222	DEK	P35659	375 aa	Known RBP	13.71	□□□□□ -0.21
SAG-208	ENST00000469222	RBM19	Q9Y4C8	960 aa	Known RBP	13.71	□□□□□ -0.21
SAG-208	ENST00000469222	SETD5	Q9C0A6	1442 aa		13.71	□□□□□ -0.22
SAG-208	ENST00000469222	RCAN3	Q9UKA8	241 aa		13.71	□□□□□ -0.22
SAG-208	ENST00000469222	PTMS	P20962	102 aa		13.7	□□□□□ -0.22
SAG-208	ENST00000469222	CHMP4A	Q9BY43	222 aa		13.69	□□□□□ -0.22
SAG-208	ENST00000469222	ITPRIP	Q8IWB1	547 aa		13.69	□□□□□ -0.22
SAG-208	ENST00000469222	RALBP1	Q15311	655 aa		13.68	□□□□□ -0.22
SAG-208	ENST00000469222	HTATSF1	O43719	755 aa	Known RBP	13.68	□□□□□ -0.22
SAG-208	ENST00000469222	KIAA2012	Q0VF49	1180 aa		13.68	□□□□□ -0.22
SAG-208	ENST00000469222	TCERG1	O14776	1098 aa	Known RBP	13.67	□□□□□ -0.22
SAG-208	ENST00000469222	CUX2	O14529	1486 aa		13.67	□□□□□ -0.22
SAG-208	ENST00000469222	EIF4G1	Q04637	1599 aa	Known RBP	13.66	□□□□□ -0.22
SAG-208	ENST00000469222	SLK	Q9H2G2	1235 aa	Predicted RBP	13.66	□□□□□ -0.22
SAG-208	ENST00000469222	ARHGAP35	Q9NRY4	1499 aa		13.65	□□□□□ -0.22
SAG-208	ENST00000469222	TRH	P20396	242 aa	Predicted RBP	13.65	□□□□□ -0.22
SAG-208	ENST00000469222	STK31	Q9BXU1	1019 aa		13.65	□□□□□ -0.22
SAG-208	ENST00000469222	PAK3	O75914	559 aa	Predicted RBP	13.64	□□□□□ -0.23
SAG-208	ENST00000469222	CSB-PGBD3	P0DP91	1061 aa		13.64	□□□□□ -0.23
SAG-208	ENST00000469222	SYAP1	Q96A49	352 aa	Predicted RBP	13.64	□□□□□ -0.23
SAG-208	ENST00000469222	FOXD1	Q16676	465 aa		13.64	□□□□□ -0.23
SAG-208	ENST00000469222	ZNF330	Q9Y3S2	320 aa	Predicted RBP	13.64	□□□□□ -0.23
SAG-208	ENST00000469222	ROCK2	O75116	1388 aa	Known RBP	13.64	□□□□□ -0.23
SAG-208	ENST00000469222	NCBP3	Q53F19	620 aa	Known RBP	13.63	□□□□□ -0.23
SAG-208	ENST00000469222	GZF1	Q9H116	711 aa	Predicted RBP	13.63	□□□□□ -0.23
SAG-208	ENST00000469222	PMFBP1	Q8TBY8	1022 aa		13.63	□□□□□ -0.23
SAG-208	ENST00000469222	HDAC5	Q9UQL6	1122 aa		13.63	□□□□□ -0.23
SAG-208	ENST00000469222	SPAG9	O60271	1321 aa	Known RBP	13.62	□□□□□ -0.23
SAG-208	ENST00000469222	NUP155	O75694	1391 aa		13.62	□□□□□ -0.23
SAG-208	ENST00000469222	HMMR	O75330	724 aa		13.62	□□□□□ -0.23
SAG-208	ENST00000469222	VPS8	Q8N3P4	1428 aa		13.61	□□□□□ -0.23
SAG-208	ENST00000469222	GORAB	Q5T7V8	394 aa		13.61	□□□□□ -0.23
SAG-208	ENST00000469222	MPHOSPH9	Q99550	1183 aa		13.61	□□□□□ -0.23
SAG-208	ENST00000469222	SMC4	Q9NTJ3	1288 aa		13.61	□□□□□ -0.23
SAG-208	ENST00000469222	CCDC34	Q96HJ3	373 aa		13.61	□□□□□ -0.23
SAG-208	ENST00000469222	EFCAB2	Q5VUJ9	269 aa		13.6	□□□□□ -0.23
SAG-208	ENST00000469222	SOGA1	O94964	1423 aa		13.59	□□□□□ -0.23
SAG-208	ENST00000469222	MFAP1	P55081	439 aa	Known RBP	13.59	□□□□□ -0.23
SAG-208	ENST00000469222	GPATCH3	Q96I76	525 aa		13.59	□□□□□ -0.23
SAG-208	ENST00000469222	TERF2IP	Q9NYB0	399 aa		13.59	□□□□□ -0.23
SAG-208	ENST00000469222	EIF3A	Q14152	1382 aa	Known RBP	13.58	□□□□□ -0.23
SAG-208	ENST00000469222	CARMIL2	Q6F5E8	1435 aa		13.58	□□□□□ -0.24
SAG-208	ENST00000469222	TPM4	P67936	248 aa		13.58	□□□□□ -0.24
SAG-208	ENST00000469222	KANK4	Q5T7N3	995 aa	Predicted RBP	13.58	□□□□□ -0.24
SAG-208	ENST00000469222	ANKRD30A	Q9BXX3	1397 aa		13.57	□□□□□ -0.24
SAG-208	ENST00000469222	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	13.57	□□□□□ -0.24
SAG-208	ENST00000469222	TRIM6-TRIM34	B2RNG4	842 aa		13.57	□□□□□ -0.24
SAG-208	ENST00000469222	NLRP13	Q86W25	1043 aa		13.57	□□□□□ -0.24
SAG-208	ENST00000469222	TAF7L	Q5H9L4	462 aa		13.57	□□□□□ -0.24
SAG-208	ENST00000469222	CHMP3	Q9Y3E7	222 aa		13.57	□□□□□ -0.24
SAG-208	ENST00000469222	RAB3GAP2	Q9H2M9	1393 aa		13.56	□□□□□ -0.24
SAG-208	ENST00000469222	CLUAP1	Q96AJ1	413 aa		13.56	□□□□□ -0.24
SAG-208	ENST00000469222	NOC3L	Q8WTT2	800 aa	Known RBP	13.55	□□□□□ -0.24
SAG-208	ENST00000469222	GOLGA6L3	A6NEY3	463 aa		13.55	□□□□□ -0.24
SAG-208	ENST00000469222	PDE3B	Q13370	1112 aa		13.55	□□□□□ -0.24
SAG-208	ENST00000469222	TMX4	Q9H1E5	349 aa	Predicted RBP	13.55	□□□□□ -0.24
SAG-208	ENST00000469222	CENPJ	Q9HC77	1338 aa	Predicted RBP	13.55	□□□□□ -0.24
SAG-208	ENST00000469222	HSP90B1	P14625	803 aa	Known RBP	13.54	□□□□□ -0.24
SAG-208	ENST00000469222	LMOD3	Q0VAK6	560 aa		13.54	□□□□□ -0.24
SAG-208	ENST00000469222	CSPP1	Q1MSJ5	1256 aa		13.54	□□□□□ -0.24
SAG-208	ENST00000469222	SLC4A10	Q6U841	1118 aa		13.54	□□□□□ -0.24
SAG-208	ENST00000469222	KIF3B	O15066	747 aa		13.53	□□□□□ -0.24
SAG-208	ENST00000469222	IPO9	Q96P70	1041 aa	Known RBP	13.53	□□□□□ -0.24
SAG-208	ENST00000469222	FMN1	Q68DA7	1419 aa		13.52	□□□□□ -0.25
SAG-208	ENST00000469222	L3MBTL2	Q969R5	705 aa		13.52	□□□□□ -0.25
SAG-208	ENST00000469222	RASSF8	Q8NHQ8	419 aa		13.52	□□□□□ -0.25
SAG-208	ENST00000469222	CCDC146	Q8IYE0	955 aa		13.51	□□□□□ -0.25
SAG-208	ENST00000469222	NGDN	Q8NEJ9	315 aa	Known RBP	13.51	□□□□□ -0.25
SAG-208	ENST00000469222	KIF3A	Q9Y496	699 aa		13.51	□□□□□ -0.25
SAG-208	ENST00000469222	ST18	O60284	1047 aa		13.5	□□□□□ -0.25
SAG-208	ENST00000469222	AMER1	Q5JTC6	1135 aa	Predicted RBP	13.5	□□□□□ -0.25
SAG-208	ENST00000469222	ARID3A	Q99856	593 aa		13.5	□□□□□ -0.25
SAG-208	ENST00000469222	NOL8	Q76FK4	1167 aa	Known RBP	13.5	□□□□□ -0.25
SAG-208	ENST00000469222	AMPH	P49418	695 aa		13.49	□□□□□ -0.25
SAG-208	ENST00000469222	KIF16B	Q96L93	1317 aa		13.48	□□□□□ -0.25
SAG-208	ENST00000469222	PHLDB1	Q86UU1	1377 aa		13.48	□□□□□ -0.25
SAG-208	ENST00000469222	EID1	Q9Y6B2	187 aa		13.48	□□□□□ -0.25
SAG-208	ENST00000469222	CCDC9	Q9Y3X0	531 aa	Known RBP	13.48	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 126.7 ms