RNA–Protein interactions for RNA: ENST00000468712.5

SKAP2-203, Transcript of src kinase associated phosphoprotein 2, humanhuman

TSL 2

Gene SKAP2, Length 955 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKAP2-203ENST00000468712 KIAA0556O60303 1618 aa16.82■□□□□ 0.28
SKAP2-203ENST00000468712 CLCN6P51797 869 aa16.82■□□□□ 0.28
SKAP2-203ENST00000468712 GOLGA3Q08378 1498 aa16.81■□□□□ 0.28
SKAP2-203ENST00000468712 TSPOAP1O95153 1857 aa16.8■□□□□ 0.28
SKAP2-203ENST00000468712 EPRSP07814 1512 aaKnown RBP16.8■□□□□ 0.28
SKAP2-203ENST00000468712 PRXQ9BXM0 1461 aa16.8■□□□□ 0.28
SKAP2-203ENST00000468712 FARP1Q9Y4F1 1045 aaPredicted RBP16.77■□□□□ 0.28
SKAP2-203ENST00000468712 PPRC1Q5VV67 1664 aaKnown RBP16.77■□□□□ 0.28
SKAP2-203ENST00000468712 CTTNBP2Q8WZ74 1663 aa16.77■□□□□ 0.28
SKAP2-203ENST00000468712 TEX14Q8IWB6 1497 aa16.76■□□□□ 0.27
SKAP2-203ENST00000468712 ZCCHC11Q5TAX3 1644 aaKnown RBP16.76■□□□□ 0.27
SKAP2-203ENST00000468712 MAP3K4Q9Y6R4 1608 aa16.76■□□□□ 0.27
SKAP2-203ENST00000468712 KDM4FA0A1W2PPD8 638 aa16.75■□□□□ 0.27
SKAP2-203ENST00000468712 FAM9AQ8IZU1 332 aaPredicted RBP16.74■□□□□ 0.27
SKAP2-203ENST00000468712 WDR7Q9Y4E6 1490 aa16.72■□□□□ 0.27
SKAP2-203ENST00000468712 ABCA8O94911 1581 aa16.71■□□□□ 0.27
SKAP2-203ENST00000468712 DCBLD2Q96PD2 775 aa16.7■□□□□ 0.26
SKAP2-203ENST00000468712 COL17A1Q9UMD9 1497 aaPredicted RBP16.67■□□□□ 0.26
SKAP2-203ENST00000468712 MAGI3Q5TCQ9 1506 aa16.67■□□□□ 0.26
SKAP2-203ENST00000468712 CSRNP3Q8WYN3 585 aa16.66■□□□□ 0.26
SKAP2-203ENST00000468712 CFAP43Q8NDM7 1665 aa16.64■□□□□ 0.25
SKAP2-203ENST00000468712 EEA1Q15075 1411 aa16.63■□□□□ 0.25
SKAP2-203ENST00000468712 CD109Q6YHK3 1445 aa16.63■□□□□ 0.25
SKAP2-203ENST00000468712 KCNH8Q96L42 1107 aa16.59■□□□□ 0.25
SKAP2-203ENST00000468712 PHLDB1Q86UU1 1377 aa16.59■□□□□ 0.25
SKAP2-203ENST00000468712 ATP10BO94823 1461 aa16.58■□□□□ 0.24
SKAP2-203ENST00000468712 SAMD9Q5K651 1589 aa16.57■□□□□ 0.24
SKAP2-203ENST00000468712 ADGRL1O94910 1474 aa16.57■□□□□ 0.24
SKAP2-203ENST00000468712 ZNF579Q8NAF0 562 aaKnown RBP16.56■□□□□ 0.24
SKAP2-203ENST00000468712 ARAP3Q8WWN8 1544 aa16.55■□□□□ 0.24
SKAP2-203ENST00000468712 P3H3Q8IVL6 736 aa16.51■□□□□ 0.23
SKAP2-203ENST00000468712 ZRANB1Q9UGI0 708 aa16.51■□□□□ 0.23
SKAP2-203ENST00000468712 ABCA9Q8IUA7 1624 aa16.51■□□□□ 0.23
SKAP2-203ENST00000468712 RAPGEF6Q8TEU7 1601 aa16.49■□□□□ 0.23
SKAP2-203ENST00000468712 NEO1Q92859 1461 aa16.47■□□□□ 0.23
SKAP2-203ENST00000468712 OTUD5Q96G74 571 aa16.45■□□□□ 0.22
SKAP2-203ENST00000468712 NUP153P49790 1475 aaKnown RBP16.44■□□□□ 0.22
SKAP2-203ENST00000468712 EFCAB5A4FU69 1503 aa16.43■□□□□ 0.22
SKAP2-203ENST00000468712 KIF21BO75037 1637 aa16.42■□□□□ 0.22
SKAP2-203ENST00000468712 PLEKHD1A6NEE1 506 aa16.42■□□□□ 0.22
SKAP2-203ENST00000468712 ARID3CA6NKF2 412 aa16.4■□□□□ 0.22
SKAP2-203ENST00000468712 GALR2O43603 387 aaPredicted RBP16.4■□□□□ 0.22
SKAP2-203ENST00000468712 FHOD3Q2V2M9 1422 aa16.38■□□□□ 0.21
SKAP2-203ENST00000468712 POTEB2H3BUK9 544 aa16.35■□□□□ 0.21
SKAP2-203ENST00000468712 RAPGEF3O95398 923 aa16.35■□□□□ 0.21
SKAP2-203ENST00000468712 HECW2Q9P2P5 1572 aa16.34■□□□□ 0.21
SKAP2-203ENST00000468712 POTEMA6NI47 508 aa16.34■□□□□ 0.21
SKAP2-203ENST00000468712 CREBZFQ9NS37 354 aa16.34■□□□□ 0.21
SKAP2-203ENST00000468712 CFAP74Q9C0B2 1584 aa16.32■□□□□ 0.2
SKAP2-203ENST00000468712 AKNAQ7Z591 1439 aa16.31■□□□□ 0.2
SKAP2-203ENST00000468712 RANGAP1P46060 587 aaPredicted RBP16.31■□□□□ 0.2
SKAP2-203ENST00000468712 ADAMTSL3P82987 1691 aa16.3■□□□□ 0.2
SKAP2-203ENST00000468712 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.3■□□□□ 0.2
SKAP2-203ENST00000468712 DENND4BO75064 1496 aaPredicted RBP16.3■□□□□ 0.2
SKAP2-203ENST00000468712 FMN1Q68DA7 1419 aa16.3■□□□□ 0.2
SKAP2-203ENST00000468712 FRMPD1Q5SYB0 1578 aa16.3■□□□□ 0.2
SKAP2-203ENST00000468712 FANCAO15360 1455 aa16.29■□□□□ 0.2
SKAP2-203ENST00000468712 POTEGQ6S5H5 508 aa16.28■□□□□ 0.2
SKAP2-203ENST00000468712 MAGI2Q86UL8 1455 aa16.28■□□□□ 0.2
SKAP2-203ENST00000468712 UBTFP17480 764 aaKnown RBP16.27■□□□□ 0.2
SKAP2-203ENST00000468712 CDK11AQ9UQ88 783 aaPredicted RBP16.27■□□□□ 0.2
SKAP2-203ENST00000468712 PTPRMP28827 1452 aa16.27■□□□□ 0.19
SKAP2-203ENST00000468712 RICTORQ6R327 1708 aa16.26■□□□□ 0.19
SKAP2-203ENST00000468712 PLCH2O75038 1416 aa16.26■□□□□ 0.19
SKAP2-203ENST00000468712 BCORL1Q5H9F3 1711 aa16.25■□□□□ 0.19
SKAP2-203ENST00000468712 ILDR1Q86SU0 546 aaPredicted RBP16.25■□□□□ 0.19
SKAP2-203ENST00000468712 STAG3Q9UJ98 1225 aa16.25■□□□□ 0.19
SKAP2-203ENST00000468712 ZMYM4Q5VZL5 1548 aa16.24■□□□□ 0.19
SKAP2-203ENST00000468712 ARHGEF40Q8TER5 1519 aa16.24■□□□□ 0.19
SKAP2-203ENST00000468712 PAK3O75914 559 aaPredicted RBP16.23■□□□□ 0.19
SKAP2-203ENST00000468712 ARHGAP35Q9NRY4 1499 aa16.22■□□□□ 0.19
SKAP2-203ENST00000468712 HECW1Q76N89 1606 aa16.22■□□□□ 0.19
SKAP2-203ENST00000468712 TTC37Q6PGP7 1564 aa16.21■□□□□ 0.19
SKAP2-203ENST00000468712 ARID4BQ4LE39 1312 aaPredicted RBP16.21■□□□□ 0.19
SKAP2-203ENST00000468712 POGZQ7Z3K3 1410 aa16.21■□□□□ 0.19
SKAP2-203ENST00000468712 CDK13Q14004 1512 aaKnown RBP16.2■□□□□ 0.18
SKAP2-203ENST00000468712 EFCAB2Q5VUJ9 269 aa16.2■□□□□ 0.18
SKAP2-203ENST00000468712 PHF12Q96QT6 1004 aa16.19■□□□□ 0.18
SKAP2-203ENST00000468712 SCAPERQ9BY12 1400 aa16.18■□□□□ 0.18
SKAP2-203ENST00000468712 ZFYVE16Q7Z3T8 1539 aa16.17■□□□□ 0.18
SKAP2-203ENST00000468712 MADDQ8WXG6 1647 aa16.16■□□□□ 0.18
SKAP2-203ENST00000468712 TROQ12816 1431 aaPredicted RBP16.16■□□□□ 0.18
SKAP2-203ENST00000468712 PELP1Q8IZL8 1130 aaKnown RBP16.15■□□□□ 0.18
SKAP2-203ENST00000468712 PCDH10Q9P2E7 1040 aa16.15■□□□□ 0.18
SKAP2-203ENST00000468712 CLIP1P30622 1438 aa16.14■□□□□ 0.17
SKAP2-203ENST00000468712 ATP1B4Q9UN42 357 aaPredicted RBP16.14■□□□□ 0.17
SKAP2-203ENST00000468712 MYO5CQ9NQX4 1742 aa16.14■□□□□ 0.17
SKAP2-203ENST00000468712 YEATS2Q9ULM3 1422 aa16.13■□□□□ 0.17
SKAP2-203ENST00000468712 ATP10AO60312 1499 aa16.13■□□□□ 0.17
SKAP2-203ENST00000468712 PCF11O94913 1555 aaKnown RBP16.13■□□□□ 0.17
SKAP2-203ENST00000468712 KIF14Q15058 1648 aa16.12■□□□□ 0.17
SKAP2-203ENST00000468712 ZNF518AQ6AHZ1 1483 aa16.11■□□□□ 0.17
SKAP2-203ENST00000468712 LMTK3Q96Q04 1460 aa16.1■□□□□ 0.17
SKAP2-203ENST00000468712 C9orf84Q5VXU9 1444 aa16.1■□□□□ 0.17
SKAP2-203ENST00000468712 CASKIN1Q8WXD9 1431 aa16.1■□□□□ 0.17
SKAP2-203ENST00000468712 CCDC18Q5T9S5 1454 aa16.1■□□□□ 0.17
SKAP2-203ENST00000468712 RIMS1Q86UR5 1692 aaKnown RBP16.08■□□□□ 0.17
SKAP2-203ENST00000468712 FBXO41Q8TF61 875 aa16.08■□□□□ 0.16
SKAP2-203ENST00000468712 KDM5CP41229 1560 aa16.07■□□□□ 0.16
SKAP2-203ENST00000468712 SIGLEC1Q9BZZ2 1709 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms