RNA–Protein interactions for RNA: ENST00000467949.1

TSC2-211, Transcript of TSC complex subunit 2, humanhuman

TSL 4

Gene TSC2, Length 590 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-211ENST00000467949 LRRIQ1Q96JM4 1722 aa23.03■■□□□ 1.28
TSC2-211ENST00000467949 SCAPERQ9BY12 1400 aa23.03■■□□□ 1.28
TSC2-211ENST00000467949 HSPA2P54652 639 aa23.03■■□□□ 1.28
TSC2-211ENST00000467949 PLCH2O75038 1416 aa23.02■■□□□ 1.28
TSC2-211ENST00000467949 MLECQ14165 292 aa23■■□□□ 1.27
TSC2-211ENST00000467949 ARHGEF12Q9NZN5 1544 aa22.99■■□□□ 1.27
TSC2-211ENST00000467949 EHMT2Q96KQ7 1210 aa22.99■■□□□ 1.27
TSC2-211ENST00000467949 PREX1Q8TCU6 1659 aa22.99■■□□□ 1.27
TSC2-211ENST00000467949 ARHGAP35Q9NRY4 1499 aa22.98■■□□□ 1.27
TSC2-211ENST00000467949 C9orf84Q5VXU9 1444 aa22.96■■□□□ 1.27
TSC2-211ENST00000467949 FMN1Q68DA7 1419 aa22.96■■□□□ 1.27
TSC2-211ENST00000467949 ATP10AO60312 1499 aa22.95■■□□□ 1.26
TSC2-211ENST00000467949 KDM5CP41229 1560 aa22.93■■□□□ 1.26
TSC2-211ENST00000467949 ATP1B4Q9UN42 357 aaPredicted RBP22.93■■□□□ 1.26
TSC2-211ENST00000467949 ARHGAP5Q13017 1502 aa22.92■■□□□ 1.26
TSC2-211ENST00000467949 CDC42BPBQ9Y5S2 1711 aa22.91■■□□□ 1.26
TSC2-211ENST00000467949 ZNF518AQ6AHZ1 1483 aa22.91■■□□□ 1.26
TSC2-211ENST00000467949 DIP2CQ9Y2E4 1556 aa22.9■■□□□ 1.26
TSC2-211ENST00000467949 UBTFP17480 764 aaKnown RBP22.89■■□□□ 1.25
TSC2-211ENST00000467949 TROQ12816 1431 aaPredicted RBP22.89■■□□□ 1.25
TSC2-211ENST00000467949 ABCA6Q8N139 1617 aa22.89■■□□□ 1.25
TSC2-211ENST00000467949 PREX2Q70Z35 1606 aa22.87■■□□□ 1.25
TSC2-211ENST00000467949 EFCAB2Q5VUJ9 269 aa22.87■■□□□ 1.25
TSC2-211ENST00000467949 STRCQ7RTU9 1775 aa22.86■■□□□ 1.25
TSC2-211ENST00000467949 ITSN2Q9NZM3 1697 aa22.85■■□□□ 1.25
TSC2-211ENST00000467949 CLIP1P30622 1438 aa22.84■■□□□ 1.25
TSC2-211ENST00000467949 REREQ9P2R6 1566 aa22.83■■□□□ 1.25
TSC2-211ENST00000467949 C3P01024 1663 aa22.83■■□□□ 1.24
TSC2-211ENST00000467949 CDK11AQ9UQ88 783 aaPredicted RBP22.82■■□□□ 1.24
TSC2-211ENST00000467949 ABCC1P33527 1531 aa22.82■■□□□ 1.24
TSC2-211ENST00000467949 CEBPAP49715 358 aaPredicted RBP22.81■■□□□ 1.24
TSC2-211ENST00000467949 CDC42BPAQ5VT25 1732 aa22.8■■□□□ 1.24
TSC2-211ENST00000467949 CERKQ8TCT0 537 aa22.8■■□□□ 1.24
TSC2-211ENST00000467949 AFAP1Q8N556 730 aa22.79■■□□□ 1.24
TSC2-211ENST00000467949 KIDINS220Q9ULH0 1771 aa22.76■■□□□ 1.23
TSC2-211ENST00000467949 SETD1BQ9UPS6 1966 aaKnown RBP22.76■■□□□ 1.23
TSC2-211ENST00000467949 UHRF1BP1Q6BDS2 1440 aa22.76■■□□□ 1.23
TSC2-211ENST00000467949 MYT1LQ9UL68 1186 aa22.75■■□□□ 1.23
TSC2-211ENST00000467949 TRAPPC8Q9Y2L5 1435 aa22.74■■□□□ 1.23
TSC2-211ENST00000467949 MLH3Q9UHC1 1453 aa22.74■■□□□ 1.23
TSC2-211ENST00000467949 CCDC18Q5T9S5 1454 aa22.73■■□□□ 1.23
TSC2-211ENST00000467949 AGLP35573 1532 aa22.72■■□□□ 1.23
TSC2-211ENST00000467949 CASKIN1Q8WXD9 1431 aa22.71■■□□□ 1.23
TSC2-211ENST00000467949 CHIC1Q5VXU3 224 aa22.68■■□□□ 1.22
TSC2-211ENST00000467949 SAMD9LQ8IVG5 1584 aa22.67■■□□□ 1.22
TSC2-211ENST00000467949 SYCP2Q9BX26 1530 aa22.65■■□□□ 1.22
TSC2-211ENST00000467949 FYCO1Q9BQS8 1478 aa22.65■■□□□ 1.22
TSC2-211ENST00000467949 MROH2AA6NES4 1674 aa22.65■■□□□ 1.22
TSC2-211ENST00000467949 SUPT6HQ7KZ85 1726 aaKnown RBP22.64■■□□□ 1.21
TSC2-211ENST00000467949 DMRT2Q9Y5R5 561 aa22.6■■□□□ 1.21
TSC2-211ENST00000467949 PTPRTO14522 1441 aa22.59■■□□□ 1.21
TSC2-211ENST00000467949 INO80Q9ULG1 1556 aaPredicted RBP22.59■■□□□ 1.21
TSC2-211ENST00000467949 CLTCQ00610 1675 aaKnown RBP22.58■■□□□ 1.21
TSC2-211ENST00000467949 CNTLNQ9NXG0 1405 aa22.58■■□□□ 1.21
TSC2-211ENST00000467949 ESF1Q9H501 851 aaKnown RBP22.58■■□□□ 1.21
TSC2-211ENST00000467949 LTBP4Q8N2S1 1624 aa22.57■■□□□ 1.2
TSC2-211ENST00000467949 ATP7AQ04656 1500 aa22.57■■□□□ 1.2
TSC2-211ENST00000467949 NCOA1Q15788 1441 aa22.57■■□□□ 1.2
TSC2-211ENST00000467949 PLXNC1O60486 1568 aa22.55■■□□□ 1.2
TSC2-211ENST00000467949 CAMSAP1Q5T5Y3 1602 aa22.55■■□□□ 1.2
TSC2-211ENST00000467949 MYO3AQ8NEV4 1616 aa22.55■■□□□ 1.2
TSC2-211ENST00000467949 GPATCH8Q9UKJ3 1502 aaKnown RBP22.55■■□□□ 1.2
TSC2-211ENST00000467949 ZNF142P52746 1687 aaPredicted RBP22.55■■□□□ 1.2
TSC2-211ENST00000467949 ZNF777Q9ULD5 760 aaPredicted RBP22.54■■□□□ 1.2
TSC2-211ENST00000467949 SPATA31D1Q6ZQQ2 1576 aa22.52■■□□□ 1.2
TSC2-211ENST00000467949 DISP3Q9P2K9 1392 aa22.5■■□□□ 1.19
TSC2-211ENST00000467949 NPATQ14207 1427 aa22.5■■□□□ 1.19
TSC2-211ENST00000467949 ADGBQ8N7X0 1667 aa22.49■■□□□ 1.19
TSC2-211ENST00000467949 SPAG9O60271 1321 aaKnown RBP22.48■■□□□ 1.19
TSC2-211ENST00000467949 HNRNPMP52272 730 aaKnown RBP eCLIP22.46■■□□□ 1.19
TSC2-211ENST00000467949 A2MP01023 1474 aa22.46■■□□□ 1.19
TSC2-211ENST00000467949 IQSEC2Q5JU85 1478 aa22.46■■□□□ 1.19
TSC2-211ENST00000467949 CEP170BQ9Y4F5 1589 aaPredicted RBP22.46■■□□□ 1.19
TSC2-211ENST00000467949 ZMYM3Q14202 1370 aa22.45■■□□□ 1.18
TSC2-211ENST00000467949 PLEKHH2Q8IVE3 1493 aa22.45■■□□□ 1.18
TSC2-211ENST00000467949 TIAM1Q13009 1591 aa22.45■■□□□ 1.18
TSC2-211ENST00000467949 ILDR2Q71H61 639 aa22.44■■□□□ 1.18
TSC2-211ENST00000467949 KIAA1107Q9UPP5 1409 aa22.43■■□□□ 1.18
TSC2-211ENST00000467949 CCNB3Q8WWL7 1395 aa22.42■■□□□ 1.18
TSC2-211ENST00000467949 CFDP1Q9UEE9 299 aaPredicted RBP22.4■■□□□ 1.18
TSC2-211ENST00000467949 PTPRKQ15262 1439 aa22.4■■□□□ 1.18
TSC2-211ENST00000467949 EHBP1L1Q8N3D4 1523 aa22.39■■□□□ 1.17
TSC2-211ENST00000467949 MTUS2Q5JR59 1369 aa22.38■■□□□ 1.17
TSC2-211ENST00000467949 NCKAP5LQ9HCH0 1330 aa22.38■■□□□ 1.17
TSC2-211ENST00000467949 PLA2R1Q13018 1463 aa22.38■■□□□ 1.17
TSC2-211ENST00000467949 TCOF1Q13428 1488 aaKnown RBP22.35■■□□□ 1.17
TSC2-211ENST00000467949 ZNF335Q9H4Z2 1342 aaPredicted RBP22.35■■□□□ 1.17
TSC2-211ENST00000467949 POLR1AO95602 1720 aaPredicted RBP22.35■■□□□ 1.17
TSC2-211ENST00000467949 GGT6Q6P531 493 aa22.34■■□□□ 1.17
TSC2-211ENST00000467949 MBD5Q9P267 1494 aa22.33■■□□□ 1.16
TSC2-211ENST00000467949 ZNF644Q9H582 1327 aaPredicted RBP22.32■■□□□ 1.16
TSC2-211ENST00000467949 DNMT1P26358 1616 aaKnown RBP22.32■■□□□ 1.16
TSC2-211ENST00000467949 SOCS7O14512 581 aa22.29■■□□□ 1.16
TSC2-211ENST00000467949 A2ML1A8K2U0 1454 aa22.28■■□□□ 1.16
TSC2-211ENST00000467949 NEURL4Q96JN8 1562 aa22.27■■□□□ 1.16
TSC2-211ENST00000467949 CEP162Q5TB80 1403 aa22.26■■□□□ 1.15
TSC2-211ENST00000467949 PKD2Q13563 968 aa22.26■■□□□ 1.15
TSC2-211ENST00000467949 KDM5DQ9BY66 1539 aa22.26■■□□□ 1.15
TSC2-211ENST00000467949 RTEL1-TNFRSF6BF6WH68 1400 aa22.25■■□□□ 1.15
TSC2-211ENST00000467949 CAMSAP2Q08AD1 1489 aa22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms