RNA–Protein interactions for RNA: ENST00000467853.5

PSMD6-204, Transcript of proteasome 26S subunit, non-ATPase 6, humanhuman

TSL 1 (best)

Gene PSMD6, Length 4,583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD6-204ENST00000467853 MRS2Q9HD23 443 aa8.65□□□□□ -1.02
PSMD6-204ENST00000467853 NCOA1Q15788 1441 aa8.65□□□□□ -1.02
PSMD6-204ENST00000467853 PRKRIP1Q9H875 184 aaPredicted RBP8.64□□□□□ -1.03
PSMD6-204ENST00000467853 LRRIQ1Q96JM4 1722 aa8.63□□□□□ -1.03
PSMD6-204ENST00000467853 CHIC2Q9UKJ5 165 aa8.63□□□□□ -1.03
PSMD6-204ENST00000467853 URB2Q14146 1524 aaKnown RBP8.63□□□□□ -1.03
PSMD6-204ENST00000467853 L3MBTL2Q969R5 705 aa8.63□□□□□ -1.03
PSMD6-204ENST00000467853 ARID4BQ4LE39 1312 aaPredicted RBP8.62□□□□□ -1.03
PSMD6-204ENST00000467853 TDRD9Q8NDG6 1382 aaKnown RBP8.62□□□□□ -1.03
PSMD6-204ENST00000467853 EPRSP07814 1512 aaKnown RBP8.62□□□□□ -1.03
PSMD6-204ENST00000467853 FAM9BQ8IZU0 186 aa8.62□□□□□ -1.03
PSMD6-204ENST00000467853 NESP48681 1621 aa8.62□□□□□ -1.03
PSMD6-204ENST00000467853 RPRD2Q5VT52 1461 aaKnown RBP8.62□□□□□ -1.03
PSMD6-204ENST00000467853 IRX6P78412 446 aaPredicted RBP8.61□□□□□ -1.03
PSMD6-204ENST00000467853 POLR1AO95602 1720 aaPredicted RBP8.61□□□□□ -1.03
PSMD6-204ENST00000467853 IQGAP2Q13576 1575 aa8.61□□□□□ -1.03
PSMD6-204ENST00000467853 ANKRD30BQ9BXX2 1392 aa8.6□□□□□ -1.03
PSMD6-204ENST00000467853 MSH5O43196 834 aa8.59□□□□□ -1.03
PSMD6-204ENST00000467853 ROCK2O75116 1388 aaKnown RBP8.59□□□□□ -1.03
PSMD6-204ENST00000467853 SMG6Q86US8 1419 aaKnown RBP8.59□□□□□ -1.03
PSMD6-204ENST00000467853 DAPK1P53355 1430 aa8.59□□□□□ -1.03
PSMD6-204ENST00000467853 MAPK8IP2Q13387 824 aaPredicted RBP8.59□□□□□ -1.03
PSMD6-204ENST00000467853 MAGI3Q5TCQ9 1506 aa8.59□□□□□ -1.03
PSMD6-204ENST00000467853 WDR62O43379 1518 aa8.58□□□□□ -1.04
PSMD6-204ENST00000467853 DNMT1P26358 1616 aaKnown RBP8.58□□□□□ -1.04
PSMD6-204ENST00000467853 ANP32AP39687 249 aaKnown RBP8.57□□□□□ -1.04
PSMD6-204ENST00000467853 NUDCQ9Y266 331 aa8.57□□□□□ -1.04
PSMD6-204ENST00000467853 DENND4BO75064 1496 aaPredicted RBP8.57□□□□□ -1.04
PSMD6-204ENST00000467853 KIF7Q2M1P5 1343 aa8.57□□□□□ -1.04
PSMD6-204ENST00000467853 TEX14Q8IWB6 1497 aa8.56□□□□□ -1.04
PSMD6-204ENST00000467853 KTN1Q86UP2 1357 aaKnown RBP8.56□□□□□ -1.04
PSMD6-204ENST00000467853 NOP58Q9Y2X3 529 aaKnown RBP8.56□□□□□ -1.04
PSMD6-204ENST00000467853 PBRM1Q86U86 1689 aa8.55□□□□□ -1.04
PSMD6-204ENST00000467853 B4GALNT3Q6L9W6 998 aa8.55□□□□□ -1.04
PSMD6-204ENST00000467853 SPATA31E1Q6ZUB1 1445 aa8.55□□□□□ -1.04
PSMD6-204ENST00000467853 CCDC136Q96JN2 1154 aa8.55□□□□□ -1.04
PSMD6-204ENST00000467853 ABCC5O15440 1437 aa8.55□□□□□ -1.04
PSMD6-204ENST00000467853 KDM6BO15054 1643 aa8.54□□□□□ -1.04
PSMD6-204ENST00000467853 TARBP1Q13395 1621 aaKnown RBP8.54□□□□□ -1.04
PSMD6-204ENST00000467853 ADAMTS12P58397 1594 aa8.54□□□□□ -1.04
PSMD6-204ENST00000467853 CDK13Q14004 1512 aaKnown RBP8.54□□□□□ -1.04
PSMD6-204ENST00000467853 NBPF8Q3BBV2 869 aa8.53□□□□□ -1.04
PSMD6-204ENST00000467853 RTL5Q5HYW3 569 aaPredicted RBP8.53□□□□□ -1.04
PSMD6-204ENST00000467853 ITSN2Q9NZM3 1697 aa8.53□□□□□ -1.04
PSMD6-204ENST00000467853 C11orf95C9JLR9 678 aaPredicted RBP8.53□□□□□ -1.04
PSMD6-204ENST00000467853 CCDC184Q52MB2 194 aa8.53□□□□□ -1.04
PSMD6-204ENST00000467853 KIAA1107Q9UPP5 1409 aa8.53□□□□□ -1.04
PSMD6-204ENST00000467853 ADGBQ8N7X0 1667 aa8.52□□□□□ -1.05
PSMD6-204ENST00000467853 USP47Q96K76 1375 aa8.52□□□□□ -1.05
PSMD6-204ENST00000467853 RNF123Q5XPI4 1314 aa8.52□□□□□ -1.05
PSMD6-204ENST00000467853 TMC1Q8TDI8 760 aa8.52□□□□□ -1.05
PSMD6-204ENST00000467853 ANKRD30AQ9BXX3 1397 aa8.52□□□□□ -1.05
PSMD6-204ENST00000467853 KIF14Q15058 1648 aa8.52□□□□□ -1.05
PSMD6-204ENST00000467853 KIF15Q9NS87 1388 aa8.51□□□□□ -1.05
PSMD6-204ENST00000467853 RALBP1Q15311 655 aa8.51□□□□□ -1.05
PSMD6-204ENST00000467853 KIAA0586Q9BVV6 1533 aa8.51□□□□□ -1.05
PSMD6-204ENST00000467853 ZBTB47Q9UFB7 747 aaPredicted RBP8.51□□□□□ -1.05
PSMD6-204ENST00000467853 RAPGEF6Q8TEU7 1601 aa8.5□□□□□ -1.05
PSMD6-204ENST00000467853 ADGRL2O95490 1459 aa8.5□□□□□ -1.05
PSMD6-204ENST00000467853 CFDP1Q9UEE9 299 aaPredicted RBP8.5□□□□□ -1.05
PSMD6-204ENST00000467853 IPO9Q96P70 1041 aaKnown RBP8.5□□□□□ -1.05
PSMD6-204ENST00000467853 TROQ12816 1431 aaPredicted RBP8.5□□□□□ -1.05
PSMD6-204ENST00000467853 DEKP35659 375 aaKnown RBP8.49□□□□□ -1.05
PSMD6-204ENST00000467853 MBD5Q9P267 1494 aa8.49□□□□□ -1.05
PSMD6-204ENST00000467853 KIAA0556O60303 1618 aa8.49□□□□□ -1.05
PSMD6-204ENST00000467853 BRD4O60885 1362 aaPredicted RBP8.49□□□□□ -1.05
PSMD6-204ENST00000467853 DHX29Q7Z478 1369 aaKnown RBP8.49□□□□□ -1.05
PSMD6-204ENST00000467853 POLR3GLQ9BT43 218 aa8.49□□□□□ -1.05
PSMD6-204ENST00000467853 PDE3BQ13370 1112 aa8.49□□□□□ -1.05
PSMD6-204ENST00000467853 UHRF1BP1Q6BDS2 1440 aa8.49□□□□□ -1.05
PSMD6-204ENST00000467853 PZPP20742 1482 aa8.49□□□□□ -1.05
PSMD6-204ENST00000467853 ARHGEF12Q9NZN5 1544 aa8.49□□□□□ -1.05
PSMD6-204ENST00000467853 CAMSAP2Q08AD1 1489 aa8.48□□□□□ -1.05
PSMD6-204ENST00000467853 RALGAPBQ86X10 1494 aa8.48□□□□□ -1.05
PSMD6-204ENST00000467853 IFT140Q96RY7 1462 aa8.48□□□□□ -1.05
PSMD6-204ENST00000467853 TCERG1O14776 1098 aaKnown RBP8.47□□□□□ -1.05
PSMD6-204ENST00000467853 MRC2Q9UBG0 1479 aa8.47□□□□□ -1.05
PSMD6-204ENST00000467853 MYBBP1AQ9BQG0 1328 aaKnown RBP8.47□□□□□ -1.05
PSMD6-204ENST00000467853 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.47□□□□□ -1.05
PSMD6-204ENST00000467853 NUP153P49790 1475 aaKnown RBP8.47□□□□□ -1.05
PSMD6-204ENST00000467853 KDM5CP41229 1560 aa8.47□□□□□ -1.05
PSMD6-204ENST00000467853 PKD2Q13563 968 aa8.47□□□□□ -1.05
PSMD6-204ENST00000467853 ZNF326Q5BKZ1 582 aaKnown RBP8.47□□□□□ -1.05
PSMD6-204ENST00000467853 PNISRQ8TF01 805 aaKnown RBP8.47□□□□□ -1.05
PSMD6-204ENST00000467853 CARD11Q9BXL7 1154 aa8.47□□□□□ -1.05
PSMD6-204ENST00000467853 ADCY10Q96PN6 1610 aa8.45□□□□□ -1.06
PSMD6-204ENST00000467853 ARID3CA6NKF2 412 aa8.45□□□□□ -1.06
PSMD6-204ENST00000467853 SHANK2Q9UPX8 1470 aa8.45□□□□□ -1.06
PSMD6-204ENST00000467853 ANKRD50Q9ULJ7 1429 aa8.45□□□□□ -1.06
PSMD6-204ENST00000467853 MS4A1P11836 297 aa8.45□□□□□ -1.06
PSMD6-204ENST00000467853 CROCC2H7BZ55 1655 aa8.45□□□□□ -1.06
PSMD6-204ENST00000467853 CARMIL2Q6F5E8 1435 aa8.45□□□□□ -1.06
PSMD6-204ENST00000467853 DISP1Q96F81 1524 aa8.44□□□□□ -1.06
PSMD6-204ENST00000467853 INSRP06213 1382 aa8.44□□□□□ -1.06
PSMD6-204ENST00000467853 LRPPRCP42704 1394 aaKnown RBP8.44□□□□□ -1.06
PSMD6-204ENST00000467853 ZNF644Q9H582 1327 aaPredicted RBP8.44□□□□□ -1.06
PSMD6-204ENST00000467853 TSPY4P0CV99 314 aa8.44□□□□□ -1.06
PSMD6-204ENST00000467853 TSPY10P0CW01 314 aa8.44□□□□□ -1.06
PSMD6-204ENST00000467853 GPATCH8Q9UKJ3 1502 aaKnown RBP8.43□□□□□ -1.06
PSMD6-204ENST00000467853 USP35Q9P2H5 1018 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms