RNA–Protein interactions for RNA: ENST00000467387.1

SPTA1-204, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 5

Gene SPTA1, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-204ENST00000467387 FBXO3Q9UK99 471 aa12.81□□□□□ -0.36
SPTA1-204ENST00000467387 COL17A1Q9UMD9 1497 aaPredicted RBP12.8□□□□□ -0.36
SPTA1-204ENST00000467387 CLEC11AQ9Y240 323 aa12.8□□□□□ -0.36
SPTA1-204ENST00000467387 HECW2Q9P2P5 1572 aa12.8□□□□□ -0.36
SPTA1-204ENST00000467387 GOLGA3Q08378 1498 aa12.78□□□□□ -0.36
SPTA1-204ENST00000467387 CTTNBP2Q8WZ74 1663 aa12.77□□□□□ -0.37
SPTA1-204ENST00000467387 KCNH8Q96L42 1107 aa12.75□□□□□ -0.37
SPTA1-204ENST00000467387 CD109Q6YHK3 1445 aa12.74□□□□□ -0.37
SPTA1-204ENST00000467387 CHRDL2Q6WN34 429 aa12.74□□□□□ -0.37
SPTA1-204ENST00000467387 CFAP43Q8NDM7 1665 aa12.73□□□□□ -0.37
SPTA1-204ENST00000467387 MAGI3Q5TCQ9 1506 aa12.72□□□□□ -0.37
SPTA1-204ENST00000467387 ARID3CA6NKF2 412 aa12.71□□□□□ -0.37
SPTA1-204ENST00000467387 FAM9AQ8IZU1 332 aaPredicted RBP12.71□□□□□ -0.37
SPTA1-204ENST00000467387 ABCA8O94911 1581 aa12.71□□□□□ -0.37
SPTA1-204ENST00000467387 KIF21BO75037 1637 aa12.7□□□□□ -0.38
SPTA1-204ENST00000467387 PRR29P0C7W0 189 aa12.69□□□□□ -0.38
SPTA1-204ENST00000467387 VASPP50552 380 aaPredicted RBP12.67□□□□□ -0.38
SPTA1-204ENST00000467387 FXR2P51116 673 aaKnown RBP eCLIP12.63□□□□□ -0.39
SPTA1-204ENST00000467387 P3H3Q8IVL6 736 aa12.63□□□□□ -0.39
SPTA1-204ENST00000467387 PRXQ9BXM0 1461 aa12.63□□□□□ -0.39
SPTA1-204ENST00000467387 ARAP3Q8WWN8 1544 aa12.62□□□□□ -0.39
SPTA1-204ENST00000467387 PIP4P2Q8N4L2 257 aa12.59□□□□□ -0.39
SPTA1-204ENST00000467387 ARID4BQ4LE39 1312 aaPredicted RBP12.59□□□□□ -0.39
SPTA1-204ENST00000467387 ATP10BO94823 1461 aa12.59□□□□□ -0.39
SPTA1-204ENST00000467387 ABCA9Q8IUA7 1624 aa12.59□□□□□ -0.39
SPTA1-204ENST00000467387 CREBZFQ9NS37 354 aa12.58□□□□□ -0.4
SPTA1-204ENST00000467387 PHLDB1Q86UU1 1377 aa12.57□□□□□ -0.4
SPTA1-204ENST00000467387 RAPGEF6Q8TEU7 1601 aa12.57□□□□□ -0.4
SPTA1-204ENST00000467387 PTPRMP28827 1452 aa12.57□□□□□ -0.4
SPTA1-204ENST00000467387 RAPGEF3O95398 923 aa12.56□□□□□ -0.4
SPTA1-204ENST00000467387 RANGAP1P46060 587 aaPredicted RBP12.56□□□□□ -0.4
SPTA1-204ENST00000467387 MIER1Q8N108 512 aa12.56□□□□□ -0.4
SPTA1-204ENST00000467387 NEO1Q92859 1461 aa12.56□□□□□ -0.4
SPTA1-204ENST00000467387 SAMD9Q5K651 1589 aa12.55□□□□□ -0.4
SPTA1-204ENST00000467387 PLCD3Q8N3E9 789 aa12.54□□□□□ -0.4
SPTA1-204ENST00000467387 ADAMTSL3P82987 1691 aa12.54□□□□□ -0.4
SPTA1-204ENST00000467387 ARHGEF40Q8TER5 1519 aa12.53□□□□□ -0.4
SPTA1-204ENST00000467387 MADDQ8WXG6 1647 aa12.53□□□□□ -0.4
SPTA1-204ENST00000467387 FBXO41Q8TF61 875 aa12.53□□□□□ -0.4
SPTA1-204ENST00000467387 PCF11O94913 1555 aaKnown RBP12.52□□□□□ -0.4
SPTA1-204ENST00000467387 FRMPD1Q5SYB0 1578 aa12.52□□□□□ -0.4
SPTA1-204ENST00000467387 PRKAR2AP13861 404 aaKnown RBP12.52□□□□□ -0.41
SPTA1-204ENST00000467387 CHADLQ6NUI6 762 aa12.52□□□□□ -0.41
SPTA1-204ENST00000467387 BCORL1Q5H9F3 1711 aa12.51□□□□□ -0.41
SPTA1-204ENST00000467387 FHOD3Q2V2M9 1422 aa12.51□□□□□ -0.41
SPTA1-204ENST00000467387 NUP153P49790 1475 aaKnown RBP12.51□□□□□ -0.41
SPTA1-204ENST00000467387 RIMS1Q86UR5 1692 aaKnown RBP12.49□□□□□ -0.41
SPTA1-204ENST00000467387 CFAP74Q9C0B2 1584 aa12.49□□□□□ -0.41
SPTA1-204ENST00000467387 DENND4BO75064 1496 aaPredicted RBP12.49□□□□□ -0.41
SPTA1-204ENST00000467387 MNX1P50219 401 aaPredicted RBP12.49□□□□□ -0.41
SPTA1-204ENST00000467387 IFNLR1Q8IU57 520 aaPredicted RBP12.49□□□□□ -0.41
SPTA1-204ENST00000467387 FANCAO15360 1455 aa12.47□□□□□ -0.41
SPTA1-204ENST00000467387 POGZQ7Z3K3 1410 aa12.47□□□□□ -0.41
SPTA1-204ENST00000467387 PLEKHG5O94827 1062 aa12.47□□□□□ -0.41
SPTA1-204ENST00000467387 LMTK3Q96Q04 1460 aa12.46□□□□□ -0.41
SPTA1-204ENST00000467387 AKNAQ7Z591 1439 aa12.46□□□□□ -0.41
SPTA1-204ENST00000467387 PLEKHD1A6NEE1 506 aa12.46□□□□□ -0.41
SPTA1-204ENST00000467387 ZFYVE16Q7Z3T8 1539 aa12.46□□□□□ -0.42
SPTA1-204ENST00000467387 TTC37Q6PGP7 1564 aa12.44□□□□□ -0.42
SPTA1-204ENST00000467387 EFCAB5A4FU69 1503 aa12.44□□□□□ -0.42
SPTA1-204ENST00000467387 RICTORQ6R327 1708 aa12.44□□□□□ -0.42
SPTA1-204ENST00000467387 EEA1Q15075 1411 aa12.44□□□□□ -0.42
SPTA1-204ENST00000467387 ZMYM4Q5VZL5 1548 aa12.42□□□□□ -0.42
SPTA1-204ENST00000467387 ZBTB47Q9UFB7 747 aaPredicted RBP12.42□□□□□ -0.42
SPTA1-204ENST00000467387 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.42□□□□□ -0.42
SPTA1-204ENST00000467387 HSPA2P54652 639 aa12.41□□□□□ -0.42
SPTA1-204ENST00000467387 MLECQ14165 292 aa12.41□□□□□ -0.42
SPTA1-204ENST00000467387 FARP1Q9Y4F1 1045 aaPredicted RBP12.41□□□□□ -0.42
SPTA1-204ENST00000467387 YEATS2Q9ULM3 1422 aa12.4□□□□□ -0.42
SPTA1-204ENST00000467387 CDK13Q14004 1512 aaKnown RBP12.4□□□□□ -0.42
SPTA1-204ENST00000467387 FER1L4A9Z1Z3 1794 aa12.38□□□□□ -0.43
SPTA1-204ENST00000467387 KLHL34Q8N239 644 aa12.38□□□□□ -0.43
SPTA1-204ENST00000467387 ATP1B4Q9UN42 357 aaPredicted RBP12.38□□□□□ -0.43
SPTA1-204ENST00000467387 MAGI2Q86UL8 1455 aa12.38□□□□□ -0.43
SPTA1-204ENST00000467387 HECW1Q76N89 1606 aa12.37□□□□□ -0.43
SPTA1-204ENST00000467387 SCAPERQ9BY12 1400 aa12.37□□□□□ -0.43
SPTA1-204ENST00000467387 SIGLEC1Q9BZZ2 1709 aa12.34□□□□□ -0.43
SPTA1-204ENST00000467387 MYT1LQ9UL68 1186 aa12.34□□□□□ -0.43
SPTA1-204ENST00000467387 C9orf84Q5VXU9 1444 aa12.34□□□□□ -0.43
SPTA1-204ENST00000467387 POTEHQ6S545 545 aa12.33□□□□□ -0.44
SPTA1-204ENST00000467387 PLCH2O75038 1416 aa12.33□□□□□ -0.44
SPTA1-204ENST00000467387 MYO5CQ9NQX4 1742 aa12.33□□□□□ -0.44
SPTA1-204ENST00000467387 FMN1Q68DA7 1419 aa12.32□□□□□ -0.44
SPTA1-204ENST00000467387 SPOCK2Q92563 424 aa12.32□□□□□ -0.44
SPTA1-204ENST00000467387 KIF14Q15058 1648 aa12.32□□□□□ -0.44
SPTA1-204ENST00000467387 ARHGAP5Q13017 1502 aa12.32□□□□□ -0.44
SPTA1-204ENST00000467387 UBTFP17480 764 aaKnown RBP12.31□□□□□ -0.44
SPTA1-204ENST00000467387 EFCAB2Q5VUJ9 269 aa12.31□□□□□ -0.44
SPTA1-204ENST00000467387 CERKQ8TCT0 537 aa12.31□□□□□ -0.44
SPTA1-204ENST00000467387 CDK11AQ9UQ88 783 aaPredicted RBP12.31□□□□□ -0.44
SPTA1-204ENST00000467387 ATP10AO60312 1499 aa12.31□□□□□ -0.44
SPTA1-204ENST00000467387 PREX1Q8TCU6 1659 aa12.31□□□□□ -0.44
SPTA1-204ENST00000467387 ARHGEF12Q9NZN5 1544 aa12.31□□□□□ -0.44
SPTA1-204ENST00000467387 CLIP1P30622 1438 aa12.3□□□□□ -0.44
SPTA1-204ENST00000467387 ZNF518AQ6AHZ1 1483 aa12.3□□□□□ -0.44
SPTA1-204ENST00000467387 NUBP1P53384 320 aa12.3□□□□□ -0.44
SPTA1-204ENST00000467387 UHRF1BP1Q6BDS2 1440 aa12.28□□□□□ -0.44
SPTA1-204ENST00000467387 CEBPAP49715 358 aaPredicted RBP12.26□□□□□ -0.45
SPTA1-204ENST00000467387 ESF1Q9H501 851 aaKnown RBP12.26□□□□□ -0.45
SPTA1-204ENST00000467387 TROQ12816 1431 aaPredicted RBP12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms