RNA–Protein interactions for RNA: ENST00000467215.1

FAM53A-204, Transcript of family with sequence similarity 53 member A, humanhuman

TSL 3

Gene FAM53A, Length 811 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM53A-204ENST00000467215 PLCH2O75038 1416 aa32.17■■■□□ 2.74
FAM53A-204ENST00000467215 SCAPERQ9BY12 1400 aa32.17■■■□□ 2.74
FAM53A-204ENST00000467215 ARHGAP35Q9NRY4 1499 aa32.16■■■□□ 2.74
FAM53A-204ENST00000467215 PLPPR3Q6T4P5 718 aa32.14■■■□□ 2.74
FAM53A-204ENST00000467215 FMN1Q68DA7 1419 aa32.13■■■□□ 2.73
FAM53A-204ENST00000467215 ARHGEF12Q9NZN5 1544 aa32.11■■■□□ 2.73
FAM53A-204ENST00000467215 HSPA2P54652 639 aa32.1■■■□□ 2.73
FAM53A-204ENST00000467215 EHMT2Q96KQ7 1210 aa32.1■■■□□ 2.73
FAM53A-204ENST00000467215 PREX1Q8TCU6 1659 aa32.09■■■□□ 2.73
FAM53A-204ENST00000467215 C9orf84Q5VXU9 1444 aa32.08■■■□□ 2.73
FAM53A-204ENST00000467215 MLECQ14165 292 aa32.07■■■□□ 2.72
FAM53A-204ENST00000467215 KDM5CP41229 1560 aa32.07■■■□□ 2.72
FAM53A-204ENST00000467215 ATP10AO60312 1499 aa32.04■■■□□ 2.72
FAM53A-204ENST00000467215 ARHGAP5Q13017 1502 aa32.04■■■□□ 2.72
FAM53A-204ENST00000467215 CDC42BPBQ9Y5S2 1711 aa32.03■■■□□ 2.72
FAM53A-204ENST00000467215 ATP1B4Q9UN42 357 aaPredicted RBP32.02■■■□□ 2.72
FAM53A-204ENST00000467215 ZNF518AQ6AHZ1 1483 aa32.02■■■□□ 2.72
FAM53A-204ENST00000467215 TROQ12816 1431 aaPredicted RBP32.01■■■□□ 2.72
FAM53A-204ENST00000467215 DIP2CQ9Y2E4 1556 aa32.01■■■□□ 2.71
FAM53A-204ENST00000467215 UBTFP17480 764 aaKnown RBP32■■■□□ 2.71
FAM53A-204ENST00000467215 PREX2Q70Z35 1606 aa31.99■■■□□ 2.71
FAM53A-204ENST00000467215 ABCA6Q8N139 1617 aa31.99■■■□□ 2.71
FAM53A-204ENST00000467215 CLIP1P30622 1438 aa31.95■■■□□ 2.71
FAM53A-204ENST00000467215 EFCAB2Q5VUJ9 269 aa31.95■■■□□ 2.71
FAM53A-204ENST00000467215 ITSN2Q9NZM3 1697 aa31.94■■■□□ 2.7
FAM53A-204ENST00000467215 REREQ9P2R6 1566 aa31.92■■■□□ 2.7
FAM53A-204ENST00000467215 ABCC1P33527 1531 aa31.91■■■□□ 2.7
FAM53A-204ENST00000467215 CDK11AQ9UQ88 783 aaPredicted RBP31.9■■■□□ 2.7
FAM53A-204ENST00000467215 STRCQ7RTU9 1775 aa31.89■■■□□ 2.7
FAM53A-204ENST00000467215 C3P01024 1663 aa31.88■■■□□ 2.69
FAM53A-204ENST00000467215 CDC42BPAQ5VT25 1732 aa31.87■■■□□ 2.69
FAM53A-204ENST00000467215 CEBPAP49715 358 aaPredicted RBP31.82■■■□□ 2.68
FAM53A-204ENST00000467215 AFAP1Q8N556 730 aa31.82■■■□□ 2.68
FAM53A-204ENST00000467215 CCDC18Q5T9S5 1454 aa31.82■■■□□ 2.68
FAM53A-204ENST00000467215 KIDINS220Q9ULH0 1771 aa31.81■■■□□ 2.68
FAM53A-204ENST00000467215 MLH3Q9UHC1 1453 aa31.8■■■□□ 2.68
FAM53A-204ENST00000467215 SETD1BQ9UPS6 1966 aaKnown RBP31.78■■■□□ 2.68
FAM53A-204ENST00000467215 UHRF1BP1Q6BDS2 1440 aa31.78■■■□□ 2.68
FAM53A-204ENST00000467215 TRAPPC8Q9Y2L5 1435 aa31.78■■■□□ 2.68
FAM53A-204ENST00000467215 CERKQ8TCT0 537 aa31.77■■■□□ 2.68
FAM53A-204ENST00000467215 CASKIN1Q8WXD9 1431 aa31.76■■■□□ 2.68
FAM53A-204ENST00000467215 AGLP35573 1532 aa31.76■■■□□ 2.68
FAM53A-204ENST00000467215 CHIC1Q5VXU3 224 aa31.75■■■□□ 2.67
FAM53A-204ENST00000467215 MYT1LQ9UL68 1186 aa31.74■■■□□ 2.67
FAM53A-204ENST00000467215 SAMD9LQ8IVG5 1584 aa31.7■■■□□ 2.67
FAM53A-204ENST00000467215 FYCO1Q9BQS8 1478 aa31.7■■■□□ 2.66
FAM53A-204ENST00000467215 SYCP2Q9BX26 1530 aa31.66■■■□□ 2.66
FAM53A-204ENST00000467215 MROH2AA6NES4 1674 aa31.64■■■□□ 2.66
FAM53A-204ENST00000467215 SUPT6HQ7KZ85 1726 aaKnown RBP31.62■■■□□ 2.65
FAM53A-204ENST00000467215 INO80Q9ULG1 1556 aaPredicted RBP31.58■■■□□ 2.65
FAM53A-204ENST00000467215 CNTLNQ9NXG0 1405 aa31.56■■■□□ 2.64
FAM53A-204ENST00000467215 ATP7AQ04656 1500 aa31.54■■■□□ 2.64
FAM53A-204ENST00000467215 PTPRTO14522 1441 aa31.54■■■□□ 2.64
FAM53A-204ENST00000467215 PLXNC1O60486 1568 aa31.54■■■□□ 2.64
FAM53A-204ENST00000467215 CLTCQ00610 1675 aaKnown RBP31.54■■■□□ 2.64
FAM53A-204ENST00000467215 GPATCH8Q9UKJ3 1502 aaKnown RBP31.53■■■□□ 2.64
FAM53A-204ENST00000467215 DMRT2Q9Y5R5 561 aa31.52■■■□□ 2.64
FAM53A-204ENST00000467215 ESF1Q9H501 851 aaKnown RBP31.51■■■□□ 2.63
FAM53A-204ENST00000467215 NCOA1Q15788 1441 aa31.5■■■□□ 2.63
FAM53A-204ENST00000467215 LTBP4Q8N2S1 1624 aa31.5■■■□□ 2.63
FAM53A-204ENST00000467215 ZNF142P52746 1687 aaPredicted RBP31.5■■■□□ 2.63
FAM53A-204ENST00000467215 MYO3AQ8NEV4 1616 aa31.49■■■□□ 2.63
FAM53A-204ENST00000467215 CAMSAP1Q5T5Y3 1602 aa31.48■■■□□ 2.63
FAM53A-204ENST00000467215 ZNF777Q9ULD5 760 aaPredicted RBP31.47■■■□□ 2.63
FAM53A-204ENST00000467215 NPATQ14207 1427 aa31.44■■■□□ 2.62
FAM53A-204ENST00000467215 ADGBQ8N7X0 1667 aa31.42■■■□□ 2.62
FAM53A-204ENST00000467215 TIAM1Q13009 1591 aa31.41■■■□□ 2.62
FAM53A-204ENST00000467215 SPAG9O60271 1321 aaKnown RBP31.41■■■□□ 2.62
FAM53A-204ENST00000467215 PLEKHH2Q8IVE3 1493 aa31.4■■■□□ 2.62
FAM53A-204ENST00000467215 SPATA31D1Q6ZQQ2 1576 aa31.39■■■□□ 2.62
FAM53A-204ENST00000467215 A2MP01023 1474 aa31.39■■■□□ 2.62
FAM53A-204ENST00000467215 HNRNPMP52272 730 aaKnown RBP eCLIP31.38■■■□□ 2.61
FAM53A-204ENST00000467215 KIAA1107Q9UPP5 1409 aa31.38■■■□□ 2.61
FAM53A-204ENST00000467215 CEP170BQ9Y4F5 1589 aaPredicted RBP31.37■■■□□ 2.61
FAM53A-204ENST00000467215 IQSEC2Q5JU85 1478 aa31.35■■■□□ 2.61
FAM53A-204ENST00000467215 ZMYM3Q14202 1370 aa31.34■■■□□ 2.61
FAM53A-204ENST00000467215 CCNB3Q8WWL7 1395 aa31.34■■■□□ 2.61
FAM53A-204ENST00000467215 DISP3Q9P2K9 1392 aa31.34■■■□□ 2.61
FAM53A-204ENST00000467215 EHBP1L1Q8N3D4 1523 aa31.34■■■□□ 2.61
FAM53A-204ENST00000467215 MTUS2Q5JR59 1369 aa31.3■■■□□ 2.6
FAM53A-204ENST00000467215 CFDP1Q9UEE9 299 aaPredicted RBP31.3■■■□□ 2.6
FAM53A-204ENST00000467215 PTPRKQ15262 1439 aa31.28■■■□□ 2.6
FAM53A-204ENST00000467215 PLA2R1Q13018 1463 aa31.27■■■□□ 2.6
FAM53A-204ENST00000467215 ILDR2Q71H61 639 aa31.24■■■□□ 2.59
FAM53A-204ENST00000467215 TCOF1Q13428 1488 aaKnown RBP31.23■■■□□ 2.59
FAM53A-204ENST00000467215 POLR1AO95602 1720 aaPredicted RBP31.22■■■□□ 2.59
FAM53A-204ENST00000467215 MBD5Q9P267 1494 aa31.21■■■□□ 2.59
FAM53A-204ENST00000467215 NCKAP5LQ9HCH0 1330 aa31.21■■■□□ 2.59
FAM53A-204ENST00000467215 GGT6Q6P531 493 aa31.19■■■□□ 2.58
FAM53A-204ENST00000467215 ZNF335Q9H4Z2 1342 aaPredicted RBP31.19■■■□□ 2.58
FAM53A-204ENST00000467215 ZNF644Q9H582 1327 aaPredicted RBP31.19■■■□□ 2.58
FAM53A-204ENST00000467215 DNMT1P26358 1616 aaKnown RBP31.18■■■□□ 2.58
FAM53A-204ENST00000467215 CEP162Q5TB80 1403 aa31.16■■■□□ 2.58
FAM53A-204ENST00000467215 A2ML1A8K2U0 1454 aa31.14■■■□□ 2.57
FAM53A-204ENST00000467215 RTEL1-TNFRSF6BF6WH68 1400 aa31.12■■■□□ 2.57
FAM53A-204ENST00000467215 CAMSAP2Q08AD1 1489 aa31.11■■■□□ 2.57
FAM53A-204ENST00000467215 NEURL4Q96JN8 1562 aa31.11■■■□□ 2.57
FAM53A-204ENST00000467215 KDM5DQ9BY66 1539 aa31.11■■■□□ 2.57
FAM53A-204ENST00000467215 CCDC141Q6ZP82 1450 aa31.1■■■□□ 2.57
FAM53A-204ENST00000467215 PKD2Q13563 968 aa31.08■■■□□ 2.57
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms