RNA–Protein interactions for RNA: ENST00000467171.2

APOBEC1-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 1, humanhuman

TSL 1 (best)

Gene APOBEC1, Length 861 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1-202ENST00000467171 PITPNM1O00562 1244 aa14.33□□□□□ -0.12
APOBEC1-202ENST00000467171 ARHGEF11O15085 1522 aa14.32□□□□□ -0.12
APOBEC1-202ENST00000467171 CCER1Q8TC90 406 aaPredicted RBP14.32□□□□□ -0.12
APOBEC1-202ENST00000467171 NCOA2Q15596 1464 aa14.31□□□□□ -0.12
APOBEC1-202ENST00000467171 CDK11AQ9UQ88 783 aaPredicted RBP14.31□□□□□ -0.12
APOBEC1-202ENST00000467171 FGD6Q6ZV73 1430 aa14.3□□□□□ -0.12
APOBEC1-202ENST00000467171 RAPGEF6Q8TEU7 1601 aa14.3□□□□□ -0.12
APOBEC1-202ENST00000467171 PTPRGP23470 1445 aa14.29□□□□□ -0.12
APOBEC1-202ENST00000467171 MAGI3Q5TCQ9 1506 aa14.29□□□□□ -0.12
APOBEC1-202ENST00000467171 SHROOM2Q13796 1616 aa14.29□□□□□ -0.12
APOBEC1-202ENST00000467171 CDK13Q14004 1512 aaKnown RBP14.28□□□□□ -0.12
APOBEC1-202ENST00000467171 MYOM3Q5VTT5 1437 aa14.28□□□□□ -0.12
APOBEC1-202ENST00000467171 PLB1Q6P1J6 1458 aa14.28□□□□□ -0.12
APOBEC1-202ENST00000467171 PIP4P2Q8N4L2 257 aa14.28□□□□□ -0.12
APOBEC1-202ENST00000467171 CHD1O14646 1710 aa14.27□□□□□ -0.12
APOBEC1-202ENST00000467171 LRRIQ1Q96JM4 1722 aa14.27□□□□□ -0.12
APOBEC1-202ENST00000467171 ABCA8O94911 1581 aa14.27□□□□□ -0.12
APOBEC1-202ENST00000467171 CLASP1Q7Z460 1538 aa14.26□□□□□ -0.13
APOBEC1-202ENST00000467171 SUPT6HQ7KZ85 1726 aaKnown RBP14.25□□□□□ -0.13
APOBEC1-202ENST00000467171 MIA2Q96PC5 1412 aa14.24□□□□□ -0.13
APOBEC1-202ENST00000467171 TROQ12816 1431 aaPredicted RBP14.24□□□□□ -0.13
APOBEC1-202ENST00000467171 FAM50AQ14320 339 aaKnown RBP14.23□□□□□ -0.13
APOBEC1-202ENST00000467171 CLSPNQ9HAW4 1339 aa14.22□□□□□ -0.13
APOBEC1-202ENST00000467171 FXR2P51116 673 aaKnown RBP eCLIP14.22□□□□□ -0.13
APOBEC1-202ENST00000467171 ZNF692Q9BU19 519 aaPredicted RBP14.22□□□□□ -0.13
APOBEC1-202ENST00000467171 TCOF1Q13428 1488 aaKnown RBP14.22□□□□□ -0.13
APOBEC1-202ENST00000467171 SSUH2Q9Y2M2 353 aa14.21□□□□□ -0.13
APOBEC1-202ENST00000467171 UACAQ9BZF9 1416 aa14.21□□□□□ -0.13
APOBEC1-202ENST00000467171 ATP10BO94823 1461 aa14.2□□□□□ -0.14
APOBEC1-202ENST00000467171 ARID3CA6NKF2 412 aa14.19□□□□□ -0.14
APOBEC1-202ENST00000467171 SETD5Q9C0A6 1442 aa14.18□□□□□ -0.14
APOBEC1-202ENST00000467171 PLEKHD1A6NEE1 506 aa14.18□□□□□ -0.14
APOBEC1-202ENST00000467171 ITGAEP38570 1179 aa14.17□□□□□ -0.14
APOBEC1-202ENST00000467171 DHX57Q6P158 1386 aaKnown RBP14.16□□□□□ -0.14
APOBEC1-202ENST00000467171 UHRF1BP1LA0JNW5 1464 aa14.15□□□□□ -0.14
APOBEC1-202ENST00000467171 SPDYE1Q8NFV5 336 aaPredicted RBP14.15□□□□□ -0.14
APOBEC1-202ENST00000467171 RAB3GAP2Q9H2M9 1393 aa14.14□□□□□ -0.15
APOBEC1-202ENST00000467171 PTPN23Q9H3S7 1636 aa14.13□□□□□ -0.15
APOBEC1-202ENST00000467171 ABCC2Q92887 1545 aa14.13□□□□□ -0.15
APOBEC1-202ENST00000467171 ERCC6L2Q5T890 1561 aa14.13□□□□□ -0.15
APOBEC1-202ENST00000467171 HFM1A2PYH4 1435 aa14.12□□□□□ -0.15
APOBEC1-202ENST00000467171 PTPRKQ15262 1439 aa14.12□□□□□ -0.15
APOBEC1-202ENST00000467171 ADCY10Q96PN6 1610 aa14.12□□□□□ -0.15
APOBEC1-202ENST00000467171 GPATCH8Q9UKJ3 1502 aaKnown RBP14.11□□□□□ -0.15
APOBEC1-202ENST00000467171 AKNAQ7Z591 1439 aa14.11□□□□□ -0.15
APOBEC1-202ENST00000467171 ABCC10Q5T3U5 1492 aa14.1□□□□□ -0.15
APOBEC1-202ENST00000467171 CLEC11AQ9Y240 323 aa14.09□□□□□ -0.15
APOBEC1-202ENST00000467171 CFDP1Q9UEE9 299 aaPredicted RBP14.07□□□□□ -0.16
APOBEC1-202ENST00000467171 ACIN1Q9UKV3 1341 aaKnown RBP14.07□□□□□ -0.16
APOBEC1-202ENST00000467171 ROCK1Q13464 1354 aa14.07□□□□□ -0.16
APOBEC1-202ENST00000467171 NAIPQ13075 1403 aa14.07□□□□□ -0.16
APOBEC1-202ENST00000467171 KDM5BQ9UGL1 1544 aa14.06□□□□□ -0.16
APOBEC1-202ENST00000467171 KIF14Q15058 1648 aa14.05□□□□□ -0.16
APOBEC1-202ENST00000467171 SP7Q8TDD2 431 aaPredicted RBP14.05□□□□□ -0.16
APOBEC1-202ENST00000467171 ABCC5O15440 1437 aa14.05□□□□□ -0.16
APOBEC1-202ENST00000467171 DAPK1P53355 1430 aa14.03□□□□□ -0.16
APOBEC1-202ENST00000467171 ITSN2Q9NZM3 1697 aa14.01□□□□□ -0.17
APOBEC1-202ENST00000467171 CAMSAP2Q08AD1 1489 aa14.01□□□□□ -0.17
APOBEC1-202ENST00000467171 ZNF644Q9H582 1327 aaPredicted RBP14.01□□□□□ -0.17
APOBEC1-202ENST00000467171 HAX1O00165 279 aa14.01□□□□□ -0.17
APOBEC1-202ENST00000467171 DNMT1P26358 1616 aaKnown RBP13.99□□□□□ -0.17
APOBEC1-202ENST00000467171 RSPH4AQ5TD94 716 aa13.98□□□□□ -0.17
APOBEC1-202ENST00000467171 MAPKBP1O60336 1514 aa13.97□□□□□ -0.17
APOBEC1-202ENST00000467171 PRKAR2AP13861 404 aaKnown RBP13.97□□□□□ -0.17
APOBEC1-202ENST00000467171 ADGRL2O95490 1459 aa13.96□□□□□ -0.17
APOBEC1-202ENST00000467171 RRP7BPQ9NSQ0 103 aa13.96□□□□□ -0.17
APOBEC1-202ENST00000467171 CHIC2Q9UKJ5 165 aa13.96□□□□□ -0.17
APOBEC1-202ENST00000467171 SHANK2Q9UPX8 1470 aa13.95□□□□□ -0.18
APOBEC1-202ENST00000467171 TIMELESSQ9UNS1 1208 aa13.95□□□□□ -0.18
APOBEC1-202ENST00000467171 ZNF777Q9ULD5 760 aaPredicted RBP13.94□□□□□ -0.18
APOBEC1-202ENST00000467171 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.94□□□□□ -0.18
APOBEC1-202ENST00000467171 ZCCHC11Q5TAX3 1644 aaKnown RBP13.93□□□□□ -0.18
APOBEC1-202ENST00000467171 PLCH2O75038 1416 aa13.93□□□□□ -0.18
APOBEC1-202ENST00000467171 NCOA1Q15788 1441 aa13.93□□□□□ -0.18
APOBEC1-202ENST00000467171 KIAA1107Q9UPP5 1409 aa13.93□□□□□ -0.18
APOBEC1-202ENST00000467171 ANKRD30AQ9BXX3 1397 aa13.93□□□□□ -0.18
APOBEC1-202ENST00000467171 PLEKHH2Q8IVE3 1493 aa13.93□□□□□ -0.18
APOBEC1-202ENST00000467171 MBD5Q9P267 1494 aa13.93□□□□□ -0.18
APOBEC1-202ENST00000467171 ARHGEF5Q12774 1597 aa13.92□□□□□ -0.18
APOBEC1-202ENST00000467171 GCC2Q8IWJ2 1684 aa13.91□□□□□ -0.18
APOBEC1-202ENST00000467171 CDC42BPAQ5VT25 1732 aa13.91□□□□□ -0.18
APOBEC1-202ENST00000467171 WDR7Q9Y4E6 1490 aa13.91□□□□□ -0.18
APOBEC1-202ENST00000467171 PREX2Q70Z35 1606 aa13.9□□□□□ -0.18
APOBEC1-202ENST00000467171 TSPY4P0CV99 314 aa13.9□□□□□ -0.18
APOBEC1-202ENST00000467171 TSPY10P0CW01 314 aa13.9□□□□□ -0.18
APOBEC1-202ENST00000467171 ARAP3Q8WWN8 1544 aa13.9□□□□□ -0.19
APOBEC1-202ENST00000467171 PRR29P0C7W0 189 aa13.89□□□□□ -0.19
APOBEC1-202ENST00000467171 EFCAB2Q5VUJ9 269 aa13.89□□□□□ -0.19
APOBEC1-202ENST00000467171 KCNH8Q96L42 1107 aa13.89□□□□□ -0.19
APOBEC1-202ENST00000467171 C9orf84Q5VXU9 1444 aa13.89□□□□□ -0.19
APOBEC1-202ENST00000467171 TTC37Q6PGP7 1564 aa13.88□□□□□ -0.19
APOBEC1-202ENST00000467171 CCDC141Q6ZP82 1450 aa13.88□□□□□ -0.19
APOBEC1-202ENST00000467171 NPM1P06748 294 aaKnown RBP eCLIP13.87□□□□□ -0.19
APOBEC1-202ENST00000467171 ARHGAP5Q13017 1502 aa13.86□□□□□ -0.19
APOBEC1-202ENST00000467171 HNRNPMP52272 730 aaKnown RBP eCLIP13.86□□□□□ -0.19
APOBEC1-202ENST00000467171 ASXL2Q76L83 1435 aa13.86□□□□□ -0.19
APOBEC1-202ENST00000467171 SAMD9LQ8IVG5 1584 aa13.86□□□□□ -0.19
APOBEC1-202ENST00000467171 TRIM52Q96A61 297 aa13.84□□□□□ -0.19
APOBEC1-202ENST00000467171 MPHOSPH9Q99550 1183 aa13.84□□□□□ -0.19
APOBEC1-202ENST00000467171 ANKRD50Q9ULJ7 1429 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms