RNA–Protein interactions for RNA: ENST00000467093.1

KDM5C-210, Transcript of lysine demethylase 5C, humanhuman

TSL 3

Gene KDM5C, Length 446 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5C-210ENST00000467093 KIAA0556O60303 1618 aa13.81□□□□□ -0.2
KDM5C-210ENST00000467093 FHOD3Q2V2M9 1422 aa13.8□□□□□ -0.2
KDM5C-210ENST00000467093 TRAPPC8Q9Y2L5 1435 aa13.8□□□□□ -0.2
KDM5C-210ENST00000467093 ZFYVE16Q7Z3T8 1539 aa13.8□□□□□ -0.2
KDM5C-210ENST00000467093 ARID3CA6NKF2 412 aa13.79□□□□□ -0.2
KDM5C-210ENST00000467093 FAM9AQ8IZU1 332 aaPredicted RBP13.79□□□□□ -0.2
KDM5C-210ENST00000467093 EFCAB5A4FU69 1503 aa13.78□□□□□ -0.2
KDM5C-210ENST00000467093 SRCAPQ6ZRS2 3230 aa13.77□□□□□ -0.21
KDM5C-210ENST00000467093 CAMSAP1Q5T5Y3 1602 aa13.76□□□□□ -0.21
KDM5C-210ENST00000467093 MAGI2Q86UL8 1455 aa13.76□□□□□ -0.21
KDM5C-210ENST00000467093 CARMIL1Q5VZK9 1371 aa13.75□□□□□ -0.21
KDM5C-210ENST00000467093 FOXD1Q16676 465 aa13.75□□□□□ -0.21
KDM5C-210ENST00000467093 ABCA9Q8IUA7 1624 aa13.72□□□□□ -0.21
KDM5C-210ENST00000467093 SETD1AO15047 1707 aaKnown RBP13.72□□□□□ -0.21
KDM5C-210ENST00000467093 ATP10AO60312 1499 aa13.71□□□□□ -0.21
KDM5C-210ENST00000467093 SIGLEC1Q9BZZ2 1709 aa13.7□□□□□ -0.22
KDM5C-210ENST00000467093 CPS1P31327 1500 aa13.7□□□□□ -0.22
KDM5C-210ENST00000467093 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.7□□□□□ -0.22
KDM5C-210ENST00000467093 HNRNPUL2Q1KMD3 747 aaKnown RBP13.7□□□□□ -0.22
KDM5C-210ENST00000467093 TRIM52Q96A61 297 aa13.7□□□□□ -0.22
KDM5C-210ENST00000467093 C9orf84Q5VXU9 1444 aa13.69□□□□□ -0.22
KDM5C-210ENST00000467093 KIF27Q86VH2 1401 aa13.69□□□□□ -0.22
KDM5C-210ENST00000467093 RBM33Q96EV2 1170 aaKnown RBP13.68□□□□□ -0.22
KDM5C-210ENST00000467093 ZRANB1Q9UGI0 708 aa13.68□□□□□ -0.22
KDM5C-210ENST00000467093 ZMYM4Q5VZL5 1548 aa13.68□□□□□ -0.22
KDM5C-210ENST00000467093 UGGT2Q9NYU1 1516 aa13.68□□□□□ -0.22
KDM5C-210ENST00000467093 RICTORQ6R327 1708 aa13.66□□□□□ -0.22
KDM5C-210ENST00000467093 ABCA8O94911 1581 aa13.65□□□□□ -0.22
KDM5C-210ENST00000467093 SHANK2Q9UPX8 1470 aa13.64□□□□□ -0.23
KDM5C-210ENST00000467093 MYT1LQ9UL68 1186 aa13.64□□□□□ -0.23
KDM5C-210ENST00000467093 PLA2R1Q13018 1463 aa13.63□□□□□ -0.23
KDM5C-210ENST00000467093 ATP10BO94823 1461 aa13.62□□□□□ -0.23
KDM5C-210ENST00000467093 HECW1Q76N89 1606 aa13.61□□□□□ -0.23
KDM5C-210ENST00000467093 RAPGEF2Q9Y4G8 1499 aa13.6□□□□□ -0.23
KDM5C-210ENST00000467093 TCOF1Q13428 1488 aaKnown RBP13.59□□□□□ -0.23
KDM5C-210ENST00000467093 C3P01024 1663 aa13.58□□□□□ -0.24
KDM5C-210ENST00000467093 NPATQ14207 1427 aa13.57□□□□□ -0.24
KDM5C-210ENST00000467093 ZNF772Q68DY9 489 aaPredicted RBP13.57□□□□□ -0.24
KDM5C-210ENST00000467093 SCAPERQ9BY12 1400 aa13.56□□□□□ -0.24
KDM5C-210ENST00000467093 GOLGA3Q08378 1498 aa13.56□□□□□ -0.24
KDM5C-210ENST00000467093 ALKQ9UM73 1620 aa13.56□□□□□ -0.24
KDM5C-210ENST00000467093 CNTLNQ9NXG0 1405 aa13.56□□□□□ -0.24
KDM5C-210ENST00000467093 RXRBP28702 533 aa13.55□□□□□ -0.24
KDM5C-210ENST00000467093 CFAP74Q9C0B2 1584 aa13.54□□□□□ -0.24
KDM5C-210ENST00000467093 PLEKHD1A6NEE1 506 aa13.52□□□□□ -0.25
KDM5C-210ENST00000467093 MEX3CQ5U5Q3 659 aaKnown RBP13.5□□□□□ -0.25
KDM5C-210ENST00000467093 ZMYM3Q14202 1370 aa13.49□□□□□ -0.25
KDM5C-210ENST00000467093 CTTNBP2Q8WZ74 1663 aa13.49□□□□□ -0.25
KDM5C-210ENST00000467093 PRXQ9BXM0 1461 aa13.47□□□□□ -0.25
KDM5C-210ENST00000467093 LRRC7Q96NW7 1537 aa13.46□□□□□ -0.25
KDM5C-210ENST00000467093 NUTM2BA6NNL0 878 aaPredicted RBP13.46□□□□□ -0.25
KDM5C-210ENST00000467093 NUTM2EB1AL46 878 aaPredicted RBP13.46□□□□□ -0.25
KDM5C-210ENST00000467093 NUTM2DQ5VT03 806 aaPredicted RBP13.46□□□□□ -0.25
KDM5C-210ENST00000467093 ANKLE2Q86XL3 938 aa13.46□□□□□ -0.25
KDM5C-210ENST00000467093 NUTM2AQ8IVF1 878 aaPredicted RBP13.46□□□□□ -0.25
KDM5C-210ENST00000467093 YY1P25490 414 aa13.45□□□□□ -0.26
KDM5C-210ENST00000467093 SETBP1Q9Y6X0 1596 aa13.45□□□□□ -0.26
KDM5C-210ENST00000467093 AGLP35573 1532 aa13.44□□□□□ -0.26
KDM5C-210ENST00000467093 FAM135BQ49AJ0 1406 aa13.44□□□□□ -0.26
KDM5C-210ENST00000467093 CHIC1Q5VXU3 224 aa13.43□□□□□ -0.26
KDM5C-210ENST00000467093 P3H3Q8IVL6 736 aa13.43□□□□□ -0.26
KDM5C-210ENST00000467093 AFAP1Q8N556 730 aa13.43□□□□□ -0.26
KDM5C-210ENST00000467093 CEP170BQ9Y4F5 1589 aaPredicted RBP13.42□□□□□ -0.26
KDM5C-210ENST00000467093 EFCAB2Q5VUJ9 269 aa13.42□□□□□ -0.26
KDM5C-210ENST00000467093 EEA1Q15075 1411 aa13.4□□□□□ -0.26
KDM5C-210ENST00000467093 RNF17Q9BXT8 1623 aaKnown RBP13.4□□□□□ -0.26
KDM5C-210ENST00000467093 CDK12Q9NYV4 1490 aaPredicted RBP13.4□□□□□ -0.26
KDM5C-210ENST00000467093 SUPT6HQ7KZ85 1726 aaKnown RBP13.39□□□□□ -0.27
KDM5C-210ENST00000467093 JCADQ9P266 1359 aa13.39□□□□□ -0.27
KDM5C-210ENST00000467093 VWDEQ8N2E2 1590 aa13.38□□□□□ -0.27
KDM5C-210ENST00000467093 ZNF518AQ6AHZ1 1483 aa13.37□□□□□ -0.27
KDM5C-210ENST00000467093 SENP3-EIF4A1A0A087X0R7 540 aa13.37□□□□□ -0.27
KDM5C-210ENST00000467093 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.36□□□□□ -0.27
KDM5C-210ENST00000467093 ZNF142P52746 1687 aaPredicted RBP13.36□□□□□ -0.27
KDM5C-210ENST00000467093 MYO3AQ8NEV4 1616 aa13.35□□□□□ -0.27
KDM5C-210ENST00000467093 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.35□□□□□ -0.276e-6■□□□□ 9.1
KDM5C-210ENST00000467093 PLCH2O75038 1416 aa13.35□□□□□ -0.27
KDM5C-210ENST00000467093 REREQ9P2R6 1566 aa13.34□□□□□ -0.27
KDM5C-210ENST00000467093 NPHP4O75161 1426 aaPredicted RBP13.34□□□□□ -0.27
KDM5C-210ENST00000467093 A2ML1A8K2U0 1454 aa13.34□□□□□ -0.27
KDM5C-210ENST00000467093 ATAD2Q6PL18 1390 aa13.33□□□□□ -0.27
KDM5C-210ENST00000467093 THEMISQ8N1K5 641 aaPredicted RBP13.33□□□□□ -0.28
KDM5C-210ENST00000467093 SPATA31A6Q5VVP1 1343 aa13.33□□□□□ -0.28
KDM5C-210ENST00000467093 CSRNP3Q8WYN3 585 aa13.31□□□□□ -0.28
KDM5C-210ENST00000467093 NEURL4Q96JN8 1562 aa13.31□□□□□ -0.28
KDM5C-210ENST00000467093 DIP2CQ9Y2E4 1556 aa13.31□□□□□ -0.28
KDM5C-210ENST00000467093 SAMD9Q5K651 1589 aa13.29□□□□□ -0.28
KDM5C-210ENST00000467093 RBM6P78332 1123 aaKnown RBP13.29□□□□□ -0.28
KDM5C-210ENST00000467093 CCDC125Q86Z20 511 aa13.29□□□□□ -0.28
KDM5C-210ENST00000467093 MROH2AA6NES4 1674 aa13.28□□□□□ -0.28
KDM5C-210ENST00000467093 DNMT1P26358 1616 aaKnown RBP13.28□□□□□ -0.28
KDM5C-210ENST00000467093 CDK13Q14004 1512 aaKnown RBP13.27□□□□□ -0.29
KDM5C-210ENST00000467093 SYNMO15061 1565 aa13.27□□□□□ -0.29
KDM5C-210ENST00000467093 MLH3Q9UHC1 1453 aa13.26□□□□□ -0.29
KDM5C-210ENST00000467093 POLR1AO95602 1720 aaPredicted RBP13.25□□□□□ -0.29
KDM5C-210ENST00000467093 RGS12O14924 1447 aa13.25□□□□□ -0.29
KDM5C-210ENST00000467093 NGLY1Q96IV0 654 aa13.25□□□□□ -0.29
KDM5C-210ENST00000467093 QTRT2Q9H974 415 aaKnown RBP13.25□□□□□ -0.29
KDM5C-210ENST00000467093 MED14O60244 1454 aa13.24□□□□□ -0.29
KDM5C-210ENST00000467093 GGT6Q6P531 493 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms