RNA–Protein interactions for RNA: ENST00000467044.1

NUP188-204, Transcript of nucleoporin 188, humanhuman

TSL 2

Gene NUP188, Length 584 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-204ENST00000467044 FGD6Q6ZV73 1430 aa16.41■□□□□ 0.22
NUP188-204ENST00000467044 PREX2Q70Z35 1606 aa16.41■□□□□ 0.22
NUP188-204ENST00000467044 TSPOAP1O95153 1857 aa16.4■□□□□ 0.22
NUP188-204ENST00000467044 EFCAB2Q5VUJ9 269 aa16.4■□□□□ 0.22
NUP188-204ENST00000467044 MAP3K4Q9Y6R4 1608 aa16.4■□□□□ 0.22
NUP188-204ENST00000467044 MIA2Q96PC5 1412 aa16.39■□□□□ 0.21
NUP188-204ENST00000467044 ZNF644Q9H582 1327 aaPredicted RBP16.38■□□□□ 0.21
NUP188-204ENST00000467044 PTPN23Q9H3S7 1636 aa16.37■□□□□ 0.21
NUP188-204ENST00000467044 TRIM26Q12899 539 aaPredicted RBP16.37■□□□□ 0.21
NUP188-204ENST00000467044 RRBP1Q9P2E9 1410 aaKnown RBP16.36■□□□□ 0.21
NUP188-204ENST00000467044 FANCAO15360 1455 aa16.35■□□□□ 0.21
NUP188-204ENST00000467044 ARAP3Q8WWN8 1544 aa16.35■□□□□ 0.21
NUP188-204ENST00000467044 ITGAEP38570 1179 aa16.34■□□□□ 0.21
NUP188-204ENST00000467044 CAMSAP2Q08AD1 1489 aa16.34■□□□□ 0.21
NUP188-204ENST00000467044 HNRNPMP52272 730 aaKnown RBP eCLIP16.32■□□□□ 0.2
NUP188-204ENST00000467044 TCOF1Q13428 1488 aaKnown RBP16.32■□□□□ 0.2
NUP188-204ENST00000467044 SAMD9LQ8IVG5 1584 aa16.32■□□□□ 0.2
NUP188-204ENST00000467044 CFAP74Q9C0B2 1584 aa16.31■□□□□ 0.2
NUP188-204ENST00000467044 AKNAQ7Z591 1439 aa16.31■□□□□ 0.2
NUP188-204ENST00000467044 PPRC1Q5VV67 1664 aaKnown RBP16.3■□□□□ 0.2
NUP188-204ENST00000467044 TEX14Q8IWB6 1497 aa16.3■□□□□ 0.2
NUP188-204ENST00000467044 PLEKHH2Q8IVE3 1493 aa16.29■□□□□ 0.2
NUP188-204ENST00000467044 NEO1Q92859 1461 aa16.29■□□□□ 0.2
NUP188-204ENST00000467044 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.28■□□□□ 0.2
NUP188-204ENST00000467044 ADGRL1O94910 1474 aa16.28■□□□□ 0.2
NUP188-204ENST00000467044 SCAPERQ9BY12 1400 aa16.28■□□□□ 0.2
NUP188-204ENST00000467044 SYCP2Q9BX26 1530 aa16.27■□□□□ 0.2
NUP188-204ENST00000467044 ABCC1P33527 1531 aa16.26■□□□□ 0.19
NUP188-204ENST00000467044 PCGF6Q9BYE7 350 aa16.26■□□□□ 0.19
NUP188-204ENST00000467044 KIAA1107Q9UPP5 1409 aa16.26■□□□□ 0.19
NUP188-204ENST00000467044 RSPH4AQ5TD94 716 aa16.25■□□□□ 0.19
NUP188-204ENST00000467044 ARHGEF12Q9NZN5 1544 aa16.24■□□□□ 0.19
NUP188-204ENST00000467044 TSPY4P0CV99 314 aa16.24■□□□□ 0.19
NUP188-204ENST00000467044 TSPY10P0CW01 314 aa16.24■□□□□ 0.19
NUP188-204ENST00000467044 MBD5Q9P267 1494 aa16.23■□□□□ 0.19
NUP188-204ENST00000467044 DAPK1P53355 1430 aa16.23■□□□□ 0.19
NUP188-204ENST00000467044 CHIC2Q9UKJ5 165 aa16.23■□□□□ 0.19
NUP188-204ENST00000467044 DNMT1P26358 1616 aaKnown RBP16.23■□□□□ 0.19
NUP188-204ENST00000467044 ABCC5O15440 1437 aa16.22■□□□□ 0.19
NUP188-204ENST00000467044 TRAPPC8Q9Y2L5 1435 aa16.22■□□□□ 0.19
NUP188-204ENST00000467044 AFAP1Q8N556 730 aa16.22■□□□□ 0.19
NUP188-204ENST00000467044 MYT1LQ9UL68 1186 aa16.22■□□□□ 0.19
NUP188-204ENST00000467044 DENND4BO75064 1496 aaPredicted RBP16.22■□□□□ 0.19
NUP188-204ENST00000467044 CCDC141Q6ZP82 1450 aa16.22■□□□□ 0.19
NUP188-204ENST00000467044 ARHGEF5Q12774 1597 aa16.21■□□□□ 0.19
NUP188-204ENST00000467044 RAPGEF3O95398 923 aa16.21■□□□□ 0.19
NUP188-204ENST00000467044 PTPRKQ15262 1439 aa16.19■□□□□ 0.18
NUP188-204ENST00000467044 SPAG9O60271 1321 aaKnown RBP16.18■□□□□ 0.18
NUP188-204ENST00000467044 ZNF518AQ6AHZ1 1483 aa16.17■□□□□ 0.18
NUP188-204ENST00000467044 POGZQ7Z3K3 1410 aa16.17■□□□□ 0.18
NUP188-204ENST00000467044 CROCC2H7BZ55 1655 aa16.17■□□□□ 0.18
NUP188-204ENST00000467044 C9orf84Q5VXU9 1444 aa16.16■□□□□ 0.18
NUP188-204ENST00000467044 RRP7BPQ9NSQ0 103 aa16.15■□□□□ 0.18
NUP188-204ENST00000467044 COL17A1Q9UMD9 1497 aaPredicted RBP16.15■□□□□ 0.18
NUP188-204ENST00000467044 RICTORQ6R327 1708 aa16.14■□□□□ 0.17
NUP188-204ENST00000467044 SHANK2Q9UPX8 1470 aa16.14■□□□□ 0.17
NUP188-204ENST00000467044 ANKRD30AQ9BXX3 1397 aa16.13■□□□□ 0.17
NUP188-204ENST00000467044 KDM6BO15054 1643 aa16.12■□□□□ 0.17
NUP188-204ENST00000467044 ADGBQ8N7X0 1667 aa16.12■□□□□ 0.17
NUP188-204ENST00000467044 MAST1Q9Y2H9 1570 aa16.12■□□□□ 0.17
NUP188-204ENST00000467044 KDM5CP41229 1560 aa16.11■□□□□ 0.17
NUP188-204ENST00000467044 FRMPD1Q5SYB0 1578 aa16.11■□□□□ 0.17
NUP188-204ENST00000467044 ATP7AQ04656 1500 aa16.1■□□□□ 0.17
NUP188-204ENST00000467044 ROCK1Q13464 1354 aa16.1■□□□□ 0.17
NUP188-204ENST00000467044 RTEL1-TNFRSF6BF6WH68 1400 aa16.1■□□□□ 0.17
NUP188-204ENST00000467044 NCOA1Q15788 1441 aa16.1■□□□□ 0.17
NUP188-204ENST00000467044 HECW2Q9P2P5 1572 aa16.09■□□□□ 0.17
NUP188-204ENST00000467044 ADGRL2O95490 1459 aa16.09■□□□□ 0.17
NUP188-204ENST00000467044 MLH3Q9UHC1 1453 aa16.09■□□□□ 0.17
NUP188-204ENST00000467044 KIDINS220Q9ULH0 1771 aa16.08■□□□□ 0.17
NUP188-204ENST00000467044 ZFYVE16Q7Z3T8 1539 aa16.08■□□□□ 0.16
NUP188-204ENST00000467044 INO80Q9ULG1 1556 aaPredicted RBP16.08■□□□□ 0.16
NUP188-204ENST00000467044 KIF15Q9NS87 1388 aa16.07■□□□□ 0.16
NUP188-204ENST00000467044 ZMYM4Q5VZL5 1548 aa16.06■□□□□ 0.16
NUP188-204ENST00000467044 NAIPQ13075 1403 aa16.05■□□□□ 0.16
NUP188-204ENST00000467044 SETD5Q9C0A6 1442 aa16.05■□□□□ 0.16
NUP188-204ENST00000467044 PLXNC1O60486 1568 aa16.04■□□□□ 0.16
NUP188-204ENST00000467044 MAGI2Q86UL8 1455 aa16.04■□□□□ 0.16
NUP188-204ENST00000467044 HFM1A2PYH4 1435 aa16.04■□□□□ 0.16
NUP188-204ENST00000467044 YEATS2Q9ULM3 1422 aa16.04■□□□□ 0.16
NUP188-204ENST00000467044 GCC2Q8IWJ2 1684 aa16.02■□□□□ 0.16
NUP188-204ENST00000467044 ABCA6Q8N139 1617 aa16.02■□□□□ 0.16
NUP188-204ENST00000467044 DUOX2Q9NRD8 1548 aa16.01■□□□□ 0.15
NUP188-204ENST00000467044 ANKRD50Q9ULJ7 1429 aa16.01■□□□□ 0.15
NUP188-204ENST00000467044 RAB3GAP2Q9H2M9 1393 aa16■□□□□ 0.15
NUP188-204ENST00000467044 DIP2CQ9Y2E4 1556 aa16■□□□□ 0.15
NUP188-204ENST00000467044 A2MP01023 1474 aa16■□□□□ 0.15
NUP188-204ENST00000467044 DHX29Q7Z478 1369 aaKnown RBP16■□□□□ 0.15
NUP188-204ENST00000467044 ATP10AO60312 1499 aa15.98■□□□□ 0.15
NUP188-204ENST00000467044 KIF3BO15066 747 aa15.97■□□□□ 0.15
NUP188-204ENST00000467044 TRIM52Q96A61 297 aa15.97■□□□□ 0.15
NUP188-204ENST00000467044 ARHGEF40Q8TER5 1519 aa15.97■□□□□ 0.15
NUP188-204ENST00000467044 ERBINQ96RT1 1412 aa15.96■□□□□ 0.15
NUP188-204ENST00000467044 HRCP23327 699 aa15.94■□□□□ 0.14
NUP188-204ENST00000467044 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.94■□□□□ 0.142e-6■■□□□ 12
NUP188-204ENST00000467044 ARID4BQ4LE39 1312 aaPredicted RBP15.94■□□□□ 0.14
NUP188-204ENST00000467044 GGT6Q6P531 493 aa15.92■□□□□ 0.14
NUP188-204ENST00000467044 ACIN1Q9UKV3 1341 aaKnown RBP15.91■□□□□ 0.14
NUP188-204ENST00000467044 EIF2AK4Q9P2K8 1649 aaKnown RBP15.9■□□□□ 0.14
NUP188-204ENST00000467044 REREQ9P2R6 1566 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms