RNA–Protein interactions for RNA: ENST00000466881.1

PLOD3-211, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 661 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-211ENST00000466881 TIAM1Q13009 1591 aa18.53■□□□□ 0.56
PLOD3-211ENST00000466881 IFNLR1Q8IU57 520 aaPredicted RBP18.52■□□□□ 0.56
PLOD3-211ENST00000466881 SPDYE1Q8NFV5 336 aaPredicted RBP18.52■□□□□ 0.56
PLOD3-211ENST00000466881 MAP3K1Q13233 1512 aa18.52■□□□□ 0.56
PLOD3-211ENST00000466881 SHROOM2Q13796 1616 aa18.5■□□□□ 0.55
PLOD3-211ENST00000466881 RTN4Q9NQC3 1192 aaKnown RBP18.5■□□□□ 0.55
PLOD3-211ENST00000466881 HECW1Q76N89 1606 aa18.49■□□□□ 0.55
PLOD3-211ENST00000466881 ARID3CA6NKF2 412 aa18.49■□□□□ 0.55
PLOD3-211ENST00000466881 CFAP43Q8NDM7 1665 aa18.48■□□□□ 0.55
PLOD3-211ENST00000466881 PTPRGP23470 1445 aa18.47■□□□□ 0.55
PLOD3-211ENST00000466881 PITPNM1O00562 1244 aa18.46■□□□□ 0.55
PLOD3-211ENST00000466881 LRRC9Q6ZRR7 1453 aa18.46■□□□□ 0.54
PLOD3-211ENST00000466881 RAPGEF6Q8TEU7 1601 aa18.45■□□□□ 0.54
PLOD3-211ENST00000466881 ILDR1Q86SU0 546 aaPredicted RBP18.45■□□□□ 0.54
PLOD3-211ENST00000466881 CCDC18Q5T9S5 1454 aa18.45■□□□□ 0.54
PLOD3-211ENST00000466881 PLB1Q6P1J6 1458 aa18.43■□□□□ 0.54
PLOD3-211ENST00000466881 LRRIQ1Q96JM4 1722 aa18.43■□□□□ 0.54
PLOD3-211ENST00000466881 MTUS2Q5JR59 1369 aa18.42■□□□□ 0.54
PLOD3-211ENST00000466881 CLEC11AQ9Y240 323 aa18.42■□□□□ 0.54
PLOD3-211ENST00000466881 EPRSP07814 1512 aaKnown RBP18.42■□□□□ 0.54
PLOD3-211ENST00000466881 AMER1Q5JTC6 1135 aaPredicted RBP18.39■□□□□ 0.53
PLOD3-211ENST00000466881 CDK13Q14004 1512 aaKnown RBP18.39■□□□□ 0.53
PLOD3-211ENST00000466881 NUP153P49790 1475 aaKnown RBP18.38■□□□□ 0.53
PLOD3-211ENST00000466881 CDK11AQ9UQ88 783 aaPredicted RBP18.37■□□□□ 0.53
PLOD3-211ENST00000466881 ABCA8O94911 1581 aa18.36■□□□□ 0.53
PLOD3-211ENST00000466881 MIER1Q8N108 512 aa18.34■□□□□ 0.53
PLOD3-211ENST00000466881 FAM69CQ0P6D2 419 aa18.33■□□□□ 0.52
PLOD3-211ENST00000466881 PLCD3Q8N3E9 789 aa18.33■□□□□ 0.52
PLOD3-211ENST00000466881 KDM6BO15054 1643 aa18.33■□□□□ 0.52
PLOD3-211ENST00000466881 EHBP1L1Q8N3D4 1523 aa18.33■□□□□ 0.52
PLOD3-211ENST00000466881 UACAQ9BZF9 1416 aa18.32■□□□□ 0.52
PLOD3-211ENST00000466881 KDM4FA0A1W2PPD8 638 aa18.31■□□□□ 0.52
PLOD3-211ENST00000466881 ABCC10Q5T3U5 1492 aa18.31■□□□□ 0.52
PLOD3-211ENST00000466881 MAGI3Q5TCQ9 1506 aa18.29■□□□□ 0.52
PLOD3-211ENST00000466881 DIP2BQ9P265 1576 aa18.29■□□□□ 0.52
PLOD3-211ENST00000466881 SUPT6HQ7KZ85 1726 aaKnown RBP18.29■□□□□ 0.52
PLOD3-211ENST00000466881 PHLDB1Q86UU1 1377 aa18.29■□□□□ 0.52
PLOD3-211ENST00000466881 PRR29P0C7W0 189 aa18.28■□□□□ 0.52
PLOD3-211ENST00000466881 ATP10BO94823 1461 aa18.27■□□□□ 0.52
PLOD3-211ENST00000466881 PLEKHD1A6NEE1 506 aa18.27■□□□□ 0.52
PLOD3-211ENST00000466881 NCOA2Q15596 1464 aa18.26■□□□□ 0.51
PLOD3-211ENST00000466881 NPM1P06748 294 aaKnown RBP eCLIP18.26■□□□□ 0.51
PLOD3-211ENST00000466881 MAPKBP1O60336 1514 aa18.26■□□□□ 0.51
PLOD3-211ENST00000466881 CCNB3Q8WWL7 1395 aa18.26■□□□□ 0.51
PLOD3-211ENST00000466881 FAM50AQ14320 339 aaKnown RBP18.25■□□□□ 0.51
PLOD3-211ENST00000466881 CREBZFQ9NS37 354 aa18.25■□□□□ 0.51
PLOD3-211ENST00000466881 RRBP1Q9P2E9 1410 aaKnown RBP18.24■□□□□ 0.51
PLOD3-211ENST00000466881 ABCC2Q92887 1545 aa18.24■□□□□ 0.51
PLOD3-211ENST00000466881 TSPOAP1O95153 1857 aa18.22■□□□□ 0.51
PLOD3-211ENST00000466881 ITGAEP38570 1179 aa18.22■□□□□ 0.51
PLOD3-211ENST00000466881 TROQ12816 1431 aaPredicted RBP18.22■□□□□ 0.51
PLOD3-211ENST00000466881 KLHL34Q8N239 644 aa18.2■□□□□ 0.5
PLOD3-211ENST00000466881 UHRF1BP1LA0JNW5 1464 aa18.2■□□□□ 0.5
PLOD3-211ENST00000466881 MYOM3Q5VTT5 1437 aa18.19■□□□□ 0.5
PLOD3-211ENST00000466881 ADCY10Q96PN6 1610 aa18.17■□□□□ 0.5
PLOD3-211ENST00000466881 FGD6Q6ZV73 1430 aa18.16■□□□□ 0.5
PLOD3-211ENST00000466881 MNX1P50219 401 aaPredicted RBP18.15■□□□□ 0.5
PLOD3-211ENST00000466881 SPOCK2Q92563 424 aa18.15■□□□□ 0.5
PLOD3-211ENST00000466881 ZCCHC11Q5TAX3 1644 aaKnown RBP18.13■□□□□ 0.49
PLOD3-211ENST00000466881 KIF14Q15058 1648 aa18.12■□□□□ 0.49
PLOD3-211ENST00000466881 KDM5BQ9UGL1 1544 aa18.12■□□□□ 0.49
PLOD3-211ENST00000466881 KCNH8Q96L42 1107 aa18.11■□□□□ 0.49
PLOD3-211ENST00000466881 ADGRL1O94910 1474 aa18.11■□□□□ 0.49
PLOD3-211ENST00000466881 PTPN23Q9H3S7 1636 aa18.09■□□□□ 0.49
PLOD3-211ENST00000466881 MIA2Q96PC5 1412 aa18.08■□□□□ 0.49
PLOD3-211ENST00000466881 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.08■□□□□ 0.49
PLOD3-211ENST00000466881 PLEKHG5O94827 1062 aa18.08■□□□□ 0.48
PLOD3-211ENST00000466881 CHRDL2Q6WN34 429 aa18.08■□□□□ 0.48
PLOD3-211ENST00000466881 CFDP1Q9UEE9 299 aaPredicted RBP18.08■□□□□ 0.48
PLOD3-211ENST00000466881 HECW2Q9P2P5 1572 aa18.08■□□□□ 0.48
PLOD3-211ENST00000466881 CHADLQ6NUI6 762 aa18.06■□□□□ 0.48
PLOD3-211ENST00000466881 ZNF777Q9ULD5 760 aaPredicted RBP18.06■□□□□ 0.48
PLOD3-211ENST00000466881 ITSN2Q9NZM3 1697 aa18.06■□□□□ 0.48
PLOD3-211ENST00000466881 ZBTB47Q9UFB7 747 aaPredicted RBP18.05■□□□□ 0.48
PLOD3-211ENST00000466881 GPATCH8Q9UKJ3 1502 aaKnown RBP18.04■□□□□ 0.48
PLOD3-211ENST00000466881 FXR2P51116 673 aaKnown RBP eCLIP18.04■□□□□ 0.48
PLOD3-211ENST00000466881 PKD2Q13563 968 aa18.03■□□□□ 0.48
PLOD3-211ENST00000466881 TCOF1Q13428 1488 aaKnown RBP18.02■□□□□ 0.48
PLOD3-211ENST00000466881 CCER1Q8TC90 406 aaPredicted RBP18.02■□□□□ 0.48
PLOD3-211ENST00000466881 ZNF644Q9H582 1327 aaPredicted RBP18■□□□□ 0.47
PLOD3-211ENST00000466881 CDC42BPAQ5VT25 1732 aa17.99■□□□□ 0.47
PLOD3-211ENST00000466881 WDR7Q9Y4E6 1490 aa17.99■□□□□ 0.47
PLOD3-211ENST00000466881 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.98■□□□□ 0.47
PLOD3-211ENST00000466881 ASXL2Q76L83 1435 aa17.98■□□□□ 0.47
PLOD3-211ENST00000466881 PPRC1Q5VV67 1664 aaKnown RBP17.97■□□□□ 0.47
PLOD3-211ENST00000466881 HRCP23327 699 aa17.97■□□□□ 0.47
PLOD3-211ENST00000466881 NUBP1P53384 320 aa17.97■□□□□ 0.47
PLOD3-211ENST00000466881 CAMSAP2Q08AD1 1489 aa17.96■□□□□ 0.47
PLOD3-211ENST00000466881 PIP4P2Q8N4L2 257 aa17.96■□□□□ 0.47
PLOD3-211ENST00000466881 CHIC2Q9UKJ5 165 aa17.96■□□□□ 0.47
PLOD3-211ENST00000466881 TTC37Q6PGP7 1564 aa17.96■□□□□ 0.46
PLOD3-211ENST00000466881 ARHGAP5Q13017 1502 aa17.93■□□□□ 0.46
PLOD3-211ENST00000466881 MYO5CQ9NQX4 1742 aa17.93■□□□□ 0.46
PLOD3-211ENST00000466881 SETD5Q9C0A6 1442 aa17.93■□□□□ 0.46
PLOD3-211ENST00000466881 PRKAR2AP13861 404 aaKnown RBP17.93■□□□□ 0.46
PLOD3-211ENST00000466881 GLI2P10070 1586 aa17.92■□□□□ 0.46
PLOD3-211ENST00000466881 PTPRKQ15262 1439 aa17.92■□□□□ 0.46
PLOD3-211ENST00000466881 PREX2Q70Z35 1606 aa17.92■□□□□ 0.46
PLOD3-211ENST00000466881 DAPK1P53355 1430 aa17.9■□□□□ 0.46
PLOD3-211ENST00000466881 CDC42BPBQ9Y5S2 1711 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 102.9 ms