RNA–Protein interactions for RNA: ENST00000466801.5

PTMA-209, Transcript of prothymosin alpha, humanhuman

TSL 5

Gene PTMA, Length 784 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTMA-209ENST00000466801 COL17A1Q9UMD9 1497 aaPredicted RBP17.5■□□□□ 0.39
PTMA-209ENST00000466801 FHOD3Q2V2M9 1422 aa17.5■□□□□ 0.39
PTMA-209ENST00000466801 PPRC1Q5VV67 1664 aaKnown RBP17.49■□□□□ 0.39
PTMA-209ENST00000466801 ARID3CA6NKF2 412 aa17.49■□□□□ 0.39
PTMA-209ENST00000466801 P3H3Q8IVL6 736 aa17.49■□□□□ 0.39
PTMA-209ENST00000466801 ZCCHC11Q5TAX3 1644 aaKnown RBP17.47■□□□□ 0.39
PTMA-209ENST00000466801 RBM42Q9BTD8 480 aaKnown RBP17.47■□□□□ 0.39
PTMA-209ENST00000466801 ZNF692Q9BU19 519 aaPredicted RBP17.46■□□□□ 0.39
PTMA-209ENST00000466801 SSUH2Q9Y2M2 353 aa17.45■□□□□ 0.38
PTMA-209ENST00000466801 WDR7Q9Y4E6 1490 aa17.44■□□□□ 0.38
PTMA-209ENST00000466801 LRRIQ1Q96JM4 1722 aa17.44■□□□□ 0.38
PTMA-209ENST00000466801 PCF11O94913 1555 aaKnown RBP17.44■□□□□ 0.38
PTMA-209ENST00000466801 TEX14Q8IWB6 1497 aa17.44■□□□□ 0.38
PTMA-209ENST00000466801 ADGRL1O94910 1474 aa17.43■□□□□ 0.38
PTMA-209ENST00000466801 PROM2Q8N271 834 aa17.42■□□□□ 0.38
PTMA-209ENST00000466801 MAP3K4Q9Y6R4 1608 aa17.42■□□□□ 0.38
PTMA-209ENST00000466801 CD109Q6YHK3 1445 aa17.41■□□□□ 0.38
PTMA-209ENST00000466801 FMN1Q68DA7 1419 aa17.4■□□□□ 0.38
PTMA-209ENST00000466801 CASKIN1Q8WXD9 1431 aa17.38■□□□□ 0.37
PTMA-209ENST00000466801 ABCA8O94911 1581 aa17.37■□□□□ 0.37
PTMA-209ENST00000466801 FYCO1Q9BQS8 1478 aa17.37■□□□□ 0.37
PTMA-209ENST00000466801 CFAP43Q8NDM7 1665 aa17.36■□□□□ 0.37
PTMA-209ENST00000466801 RAPGEF6Q8TEU7 1601 aa17.35■□□□□ 0.37
PTMA-209ENST00000466801 MAP3K1Q13233 1512 aa17.32■□□□□ 0.36
PTMA-209ENST00000466801 MAGI3Q5TCQ9 1506 aa17.32■□□□□ 0.36
PTMA-209ENST00000466801 HECW1Q76N89 1606 aa17.32■□□□□ 0.36
PTMA-209ENST00000466801 TIAM1Q13009 1591 aa17.32■□□□□ 0.36
PTMA-209ENST00000466801 ATP10BO94823 1461 aa17.31■□□□□ 0.36
PTMA-209ENST00000466801 AKT1S1Q96B36 256 aa17.28■□□□□ 0.36
PTMA-209ENST00000466801 ILDR1Q86SU0 546 aaPredicted RBP17.27■□□□□ 0.36
PTMA-209ENST00000466801 NUP153P49790 1475 aaKnown RBP17.25■□□□□ 0.35
PTMA-209ENST00000466801 RAPGEF3O95398 923 aa17.24■□□□□ 0.35
PTMA-209ENST00000466801 CCDC18Q5T9S5 1454 aa17.22■□□□□ 0.35
PTMA-209ENST00000466801 CDK13Q14004 1512 aaKnown RBP17.21■□□□□ 0.34
PTMA-209ENST00000466801 PPARGC1BQ86YN6 1023 aaKnown RBP17.2■□□□□ 0.34
PTMA-209ENST00000466801 LRRC9Q6ZRR7 1453 aa17.19■□□□□ 0.34
PTMA-209ENST00000466801 KANK4Q5T7N3 995 aaPredicted RBP17.19■□□□□ 0.34
PTMA-209ENST00000466801 ARAP3Q8WWN8 1544 aa17.18■□□□□ 0.34
PTMA-209ENST00000466801 HECW2Q9P2P5 1572 aa17.18■□□□□ 0.34
PTMA-209ENST00000466801 PLEKHD1A6NEE1 506 aa17.17■□□□□ 0.34
PTMA-209ENST00000466801 ATP1B4Q9UN42 357 aaPredicted RBP17.17■□□□□ 0.34
PTMA-209ENST00000466801 ARID4BQ4LE39 1312 aaPredicted RBP17.16■□□□□ 0.34
PTMA-209ENST00000466801 PHLDB1Q86UU1 1377 aa17.15■□□□□ 0.34
PTMA-209ENST00000466801 ABCA9Q8IUA7 1624 aa17.13■□□□□ 0.33
PTMA-209ENST00000466801 EHBP1L1Q8N3D4 1523 aa17.12■□□□□ 0.33
PTMA-209ENST00000466801 SUPT6HQ7KZ85 1726 aaKnown RBP17.1■□□□□ 0.33
PTMA-209ENST00000466801 NEO1Q92859 1461 aa17.1■□□□□ 0.33
PTMA-209ENST00000466801 FBXO3Q9UK99 471 aa17.09■□□□□ 0.33
PTMA-209ENST00000466801 REM2Q8IYK8 340 aaPredicted RBP17.07■□□□□ 0.32
PTMA-209ENST00000466801 AKNAQ7Z591 1439 aa17.05■□□□□ 0.32
PTMA-209ENST00000466801 MTUS2Q5JR59 1369 aa17.05■□□□□ 0.32
PTMA-209ENST00000466801 DENND4BO75064 1496 aaPredicted RBP17.05■□□□□ 0.32
PTMA-209ENST00000466801 PTPRMP28827 1452 aa17.05■□□□□ 0.32
PTMA-209ENST00000466801 TROQ12816 1431 aaPredicted RBP17.04■□□□□ 0.32
PTMA-209ENST00000466801 KIF14Q15058 1648 aa17.03■□□□□ 0.32
PTMA-209ENST00000466801 NCOA2Q15596 1464 aa17.02■□□□□ 0.32
PTMA-209ENST00000466801 TRIM26Q12899 539 aaPredicted RBP17.02■□□□□ 0.32
PTMA-209ENST00000466801 STAG3Q9UJ98 1225 aa17.02■□□□□ 0.32
PTMA-209ENST00000466801 FRMPD1Q5SYB0 1578 aa17.02■□□□□ 0.31
PTMA-209ENST00000466801 FANCAO15360 1455 aa17■□□□□ 0.31
PTMA-209ENST00000466801 MLECQ14165 292 aa17■□□□□ 0.31
PTMA-209ENST00000466801 SPDYE1Q8NFV5 336 aaPredicted RBP17■□□□□ 0.31
PTMA-209ENST00000466801 CDK11AQ9UQ88 783 aaPredicted RBP16.99■□□□□ 0.31
PTMA-209ENST00000466801 ADAMTSL3P82987 1691 aa16.99■□□□□ 0.31
PTMA-209ENST00000466801 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.99■□□□□ 0.315e-9■■■■□ 20.9
PTMA-209ENST00000466801 CDC42BPAQ5VT25 1732 aa16.98■□□□□ 0.31
PTMA-209ENST00000466801 RRBP1Q9P2E9 1410 aaKnown RBP16.97■□□□□ 0.31
PTMA-209ENST00000466801 SCAPERQ9BY12 1400 aa16.95■□□□□ 0.3
PTMA-209ENST00000466801 YEATS2Q9ULM3 1422 aa16.95■□□□□ 0.3
PTMA-209ENST00000466801 ITSN2Q9NZM3 1697 aa16.94■□□□□ 0.3
PTMA-209ENST00000466801 TTC37Q6PGP7 1564 aa16.94■□□□□ 0.3
PTMA-209ENST00000466801 BCORL1Q5H9F3 1711 aa16.94■□□□□ 0.3
PTMA-209ENST00000466801 HSPA2P54652 639 aa16.94■□□□□ 0.3
PTMA-209ENST00000466801 MADDQ8WXG6 1647 aa16.94■□□□□ 0.3
PTMA-209ENST00000466801 EFCAB2Q5VUJ9 269 aa16.93■□□□□ 0.3
PTMA-209ENST00000466801 MYOM3Q5VTT5 1437 aa16.93■□□□□ 0.3
PTMA-209ENST00000466801 ARHGEF40Q8TER5 1519 aa16.92■□□□□ 0.3
PTMA-209ENST00000466801 PLCH2O75038 1416 aa16.92■□□□□ 0.3
PTMA-209ENST00000466801 CDC42BPBQ9Y5S2 1711 aa16.92■□□□□ 0.3
PTMA-209ENST00000466801 FBXO41Q8TF61 875 aa16.91■□□□□ 0.3
PTMA-209ENST00000466801 FGD6Q6ZV73 1430 aa16.9■□□□□ 0.3
PTMA-209ENST00000466801 POGZQ7Z3K3 1410 aa16.9■□□□□ 0.3
PTMA-209ENST00000466801 PTPN23Q9H3S7 1636 aa16.9■□□□□ 0.3
PTMA-209ENST00000466801 PCGF6Q9BYE7 350 aa16.9■□□□□ 0.3
PTMA-209ENST00000466801 MYT1LQ9UL68 1186 aa16.9■□□□□ 0.3
PTMA-209ENST00000466801 ZFYVE16Q7Z3T8 1539 aa16.9■□□□□ 0.3
PTMA-209ENST00000466801 RICTORQ6R327 1708 aa16.9■□□□□ 0.3
PTMA-209ENST00000466801 MYO5CQ9NQX4 1742 aa16.9■□□□□ 0.3
PTMA-209ENST00000466801 CFAP74Q9C0B2 1584 aa16.89■□□□□ 0.29
PTMA-209ENST00000466801 CCNB3Q8WWL7 1395 aa16.89■□□□□ 0.29
PTMA-209ENST00000466801 PREX2Q70Z35 1606 aa16.88■□□□□ 0.29
PTMA-209ENST00000466801 GPATCH8Q9UKJ3 1502 aaKnown RBP16.88■□□□□ 0.29
PTMA-209ENST00000466801 PITPNM1O00562 1244 aa16.88■□□□□ 0.29
PTMA-209ENST00000466801 RIMS1Q86UR5 1692 aaKnown RBP16.88■□□□□ 0.29
PTMA-209ENST00000466801 MIA2Q96PC5 1412 aa16.87■□□□□ 0.29
PTMA-209ENST00000466801 TCOF1Q13428 1488 aaKnown RBP16.86■□□□□ 0.29
PTMA-209ENST00000466801 LMTK3Q96Q04 1460 aa16.86■□□□□ 0.29
PTMA-209ENST00000466801 AFAP1Q8N556 730 aa16.86■□□□□ 0.29
PTMA-209ENST00000466801 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.86■□□□□ 0.296e-7■■■■□ 20.1
PTMA-209ENST00000466801 MAGI2Q86UL8 1455 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms