RNA–Protein interactions for RNA: ENST00000466539.1

PSME4-204, Transcript of proteasome activator subunit 4, humanhuman

TSL 4

Gene PSME4, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME4-204ENST00000466539 C7P10643 843 aa11.19□□□□□ -0.62
PSME4-204ENST00000466539 HAP1P54257 671 aaPredicted RBP11.19□□□□□ -0.62
PSME4-204ENST00000466539 MROH2BQ7Z745 1585 aa11.19□□□□□ -0.62
PSME4-204ENST00000466539 RYDENQ9NUL5 291 aaKnown RBP11.18□□□□□ -0.62
PSME4-204ENST00000466539 SLC24A1O60721 1099 aa11.15□□□□□ -0.62
PSME4-204ENST00000466539 SEC24BO95487 1268 aa11.15□□□□□ -0.62
PSME4-204ENST00000466539 PLCG2P16885 1265 aa11.15□□□□□ -0.62
PSME4-204ENST00000466539 CADPS2Q86UW7 1296 aa11.13□□□□□ -0.63
PSME4-204ENST00000466539 EIF4G1Q04637 1599 aaKnown RBP11.12□□□□□ -0.63
PSME4-204ENST00000466539 POTEB2H3BUK9 544 aa11.1□□□□□ -0.63
PSME4-204ENST00000466539 POTEJP0CG39 1038 aa11.08□□□□□ -0.64
PSME4-204ENST00000466539 KDM2AQ9Y2K7 1162 aa11.08□□□□□ -0.64
PSME4-204ENST00000466539 MICALL2Q8IY33 904 aa11.07□□□□□ -0.64
PSME4-204ENST00000466539 WIZO95785 1651 aa11.07□□□□□ -0.64
PSME4-204ENST00000466539 TMEM121BQ9BXQ6 578 aaPredicted RBP11.06□□□□□ -0.64
PSME4-204ENST00000466539 BOLA1Q9Y3E2 137 aa11.06□□□□□ -0.64
PSME4-204ENST00000466539 ATAD2BQ9ULI0 1458 aa11.03□□□□□ -0.64
PSME4-204ENST00000466539 SMARCA2P51531 1590 aa11.03□□□□□ -0.64
PSME4-204ENST00000466539 NCAPD3P42695 1498 aa11.01□□□□□ -0.65
PSME4-204ENST00000466539 HMGXB3Q12766 1538 aa11.01□□□□□ -0.65
PSME4-204ENST00000466539 OTUD5Q96G74 571 aa11.01□□□□□ -0.65
PSME4-204ENST00000466539 L3MBTL3Q96JM7 780 aaPredicted RBP11.01□□□□□ -0.65
PSME4-204ENST00000466539 TOP2AP11388 1531 aaKnown RBP11□□□□□ -0.65
PSME4-204ENST00000466539 NCKAP5LQ9HCH0 1330 aa11□□□□□ -0.65
PSME4-204ENST00000466539 MAMSTRQ6ZN01 415 aa10.99□□□□□ -0.65
PSME4-204ENST00000466539 VSIG10Q8N0Z9 540 aa10.99□□□□□ -0.65
PSME4-204ENST00000466539 TMEM92Q6UXU6 159 aa10.98□□□□□ -0.65
PSME4-204ENST00000466539 CC2D2AQ9P2K1 1620 aa10.95□□□□□ -0.66
PSME4-204ENST00000466539 CRISPLD2Q9H0B8 497 aa10.95□□□□□ -0.66
PSME4-204ENST00000466539 G3V3G9 751 aa10.94□□□□□ -0.66
PSME4-204ENST00000466539 KIF3CO14782 793 aa10.91□□□□□ -0.66
PSME4-204ENST00000466539 LARP6Q9BRS8 491 aaKnown RBP10.91□□□□□ -0.66
PSME4-204ENST00000466539 C2orf72A6NCS6 295 aa10.9□□□□□ -0.66
PSME4-204ENST00000466539 SUPT5HO00267 1087 aaKnown RBP10.9□□□□□ -0.66
PSME4-204ENST00000466539 GPHNQ9NQX3 736 aaPredicted RBP10.9□□□□□ -0.66
PSME4-204ENST00000466539 PDE4AP27815 886 aa10.89□□□□□ -0.67
PSME4-204ENST00000466539 BAZ1BQ9UIG0 1483 aaKnown RBP10.88□□□□□ -0.67
PSME4-204ENST00000466539 C3orf67Q6ZVT6 689 aa10.88□□□□□ -0.67
PSME4-204ENST00000466539 MFSD10Q14728 455 aa10.87□□□□□ -0.67
PSME4-204ENST00000466539 SCUBE2Q9NQ36 999 aa10.87□□□□□ -0.67
PSME4-204ENST00000466539 DSG2Q14126 1118 aa10.86□□□□□ -0.67
PSME4-204ENST00000466539 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.86□□□□□ -0.67
PSME4-204ENST00000466539 TMC2Q8TDI7 906 aa10.85□□□□□ -0.67
PSME4-204ENST00000466539 CCDC88BA6NC98 1476 aa10.83□□□□□ -0.68
PSME4-204ENST00000466539 DDX27Q96GQ7 796 aaKnown RBP10.83□□□□□ -0.68
PSME4-204ENST00000466539 FOXK1P85037 733 aa10.82□□□□□ -0.68
PSME4-204ENST00000466539 PPP1R15BQ5SWA1 713 aa10.81□□□□□ -0.68
PSME4-204ENST00000466539 WDR70Q9NW82 654 aa10.81□□□□□ -0.68
PSME4-204ENST00000466539 PLPP6Q8IY26 295 aa10.8□□□□□ -0.68
PSME4-204ENST00000466539 SLAIN1Q8ND83 568 aa10.79□□□□□ -0.68
PSME4-204ENST00000466539 KCNV2Q8TDN2 545 aa10.77□□□□□ -0.69
PSME4-204ENST00000466539 CAMK2BQ13554 666 aa10.76□□□□□ -0.69
PSME4-204ENST00000466539 E2F4Q16254 413 aa10.76□□□□□ -0.69
PSME4-204ENST00000466539 EMILIN3Q9NT22 766 aa10.75□□□□□ -0.69
PSME4-204ENST00000466539 PCDH10Q9P2E7 1040 aa10.75□□□□□ -0.69
PSME4-204ENST00000466539 POTEMA6NI47 508 aa10.73□□□□□ -0.69
PSME4-204ENST00000466539 PRDM2Q13029 1718 aa10.72□□□□□ -0.69
PSME4-204ENST00000466539 CFTRP13569 1480 aa10.71□□□□□ -0.69
PSME4-204ENST00000466539 POTEGQ6S5H5 508 aa10.71□□□□□ -0.69
PSME4-204ENST00000466539 HOXB3P14651 431 aaPredicted RBP10.69□□□□□ -0.7
PSME4-204ENST00000466539 UPF1Q92900 1129 aaKnown RBP eCLIP10.66□□□□□ -0.7
PSME4-204ENST00000466539 DPYSL4O14531 572 aa10.65□□□□□ -0.7
PSME4-204ENST00000466539 OXER1Q8TDS5 423 aa10.65□□□□□ -0.7
PSME4-204ENST00000466539 SLC34A2O95436 690 aa10.64□□□□□ -0.71
PSME4-204ENST00000466539 P3H3Q8IVL6 736 aa10.64□□□□□ -0.71
PSME4-204ENST00000466539 ARHGEF1Q92888 912 aaKnown RBP10.64□□□□□ -0.71
PSME4-204ENST00000466539 FAM163AQ96GL9 167 aaPredicted RBP10.64□□□□□ -0.71
PSME4-204ENST00000466539 ARIH1Q9Y4X5 557 aaPredicted RBP10.64□□□□□ -0.71
PSME4-204ENST00000466539 LAMC3Q9Y6N6 1575 aa10.64□□□□□ -0.71
PSME4-204ENST00000466539 CADPSQ9ULU8 1353 aa10.64□□□□□ -0.71
PSME4-204ENST00000466539 PTCD2Q8WV60 388 aaKnown RBP10.63□□□□□ -0.71
PSME4-204ENST00000466539 PLSCR2Q9NRY7 297 aa10.63□□□□□ -0.71
PSME4-204ENST00000466539 KHSRPQ92945 711 aaKnown RBP eCLIP10.6□□□□□ -0.715e-6■□□□□ 10
PSME4-204ENST00000466539 PCDHGA4Q9Y5G9 962 aa10.6□□□□□ -0.71
PSME4-204ENST00000466539 LCE2DQ5TA82 110 aaPredicted RBP10.59□□□□□ -0.71
PSME4-204ENST00000466539 MAP3K9P80192 1104 aa10.58□□□□□ -0.72
PSME4-204ENST00000466539 GPR153Q6NV75 609 aa10.58□□□□□ -0.72
PSME4-204ENST00000466539 KDM4FA0A1W2PPD8 638 aa10.57□□□□□ -0.72
PSME4-204ENST00000466539 SEMA3EO15041 775 aa10.57□□□□□ -0.72
PSME4-204ENST00000466539 DOK7Q18PE1 504 aa10.57□□□□□ -0.72
PSME4-204ENST00000466539 ARSIQ5FYB1 569 aa10.57□□□□□ -0.72
PSME4-204ENST00000466539 PDIA6Q15084 440 aa10.55□□□□□ -0.72
PSME4-204ENST00000466539 EVI5O60447 810 aa10.54□□□□□ -0.72
PSME4-204ENST00000466539 BIVM-ERCC5R4GMW8 1640 aa10.54□□□□□ -0.72
PSME4-204ENST00000466539 SNPHO15079 494 aa10.53□□□□□ -0.72
PSME4-204ENST00000466539 BCANQ96GW7 911 aa10.53□□□□□ -0.72
PSME4-204ENST00000466539 NESP48681 1621 aa10.53□□□□□ -0.72
PSME4-204ENST00000466539 ZNF710Q8N1W2 664 aa10.52□□□□□ -0.73
PSME4-204ENST00000466539 TBC1D12O60347 775 aa10.51□□□□□ -0.73
PSME4-204ENST00000466539 NUDT7P0C024 238 aa10.51□□□□□ -0.73
PSME4-204ENST00000466539 MLLT3P42568 568 aaPredicted RBP10.51□□□□□ -0.73
PSME4-204ENST00000466539 NBR1Q14596 966 aa10.51□□□□□ -0.73
PSME4-204ENST00000466539 ANO8Q9HCE9 1232 aaPredicted RBP10.51□□□□□ -0.73
PSME4-204ENST00000466539 ZSWIM6Q9HCJ5 1215 aa10.51□□□□□ -0.73
PSME4-204ENST00000466539 ABCC8Q09428 1581 aa10.51□□□□□ -0.73
PSME4-204ENST00000466539 TOP2BQ02880 1626 aa10.51□□□□□ -0.73
PSME4-204ENST00000466539 SPDYE16A6NNV3 312 aaPredicted RBP10.5□□□□□ -0.73
PSME4-204ENST00000466539 ST18O60284 1047 aa10.5□□□□□ -0.73
PSME4-204ENST00000466539 SYNJ1O43426 1573 aa10.5□□□□□ -0.73
PSME4-204ENST00000466539 TESPA1A2RU30 521 aaPredicted RBP10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms