RNA–Protein interactions for RNA: ENST00000466045.1

CDHR3-203, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 2,358 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-203ENST00000466045 HNRNPUL2Q1KMD3 747 aaKnown RBP12.67□□□□□ -0.38
CDHR3-203ENST00000466045 NAP1L2Q9ULW6 460 aaPredicted RBP12.67□□□□□ -0.38
CDHR3-203ENST00000466045 TRIM52Q96A61 297 aa12.66□□□□□ -0.38
CDHR3-203ENST00000466045 ARHGAP35Q9NRY4 1499 aa12.66□□□□□ -0.38
CDHR3-203ENST00000466045 DHX57Q6P158 1386 aaKnown RBP12.66□□□□□ -0.38
CDHR3-203ENST00000466045 FRAT1Q92837 279 aaPredicted RBP12.65□□□□□ -0.38
CDHR3-203ENST00000466045 CUL7Q14999 1698 aa12.64□□□□□ -0.39
CDHR3-203ENST00000466045 IPO4Q8TEX9 1081 aaKnown RBP12.64□□□□□ -0.39
CDHR3-203ENST00000466045 PDCL3Q9H2J4 239 aa12.63□□□□□ -0.39
CDHR3-203ENST00000466045 RRAGDQ9NQL2 400 aaPredicted RBP12.63□□□□□ -0.39
CDHR3-203ENST00000466045 NUP160Q12769 1436 aa12.62□□□□□ -0.39
CDHR3-203ENST00000466045 RRBP1Q9P2E9 1410 aaKnown RBP12.62□□□□□ -0.39
CDHR3-203ENST00000466045 GTF2E1P29083 439 aaPredicted RBP12.62□□□□□ -0.39
CDHR3-203ENST00000466045 MAP3K1Q13233 1512 aa12.61□□□□□ -0.39
CDHR3-203ENST00000466045 DCAF11Q8TEB1 546 aa12.61□□□□□ -0.39
CDHR3-203ENST00000466045 BBXQ8WY36 941 aaPredicted RBP12.61□□□□□ -0.39
CDHR3-203ENST00000466045 BRD2P25440 801 aaKnown RBP12.59□□□□□ -0.39
CDHR3-203ENST00000466045 KANK4Q5T7N3 995 aaPredicted RBP12.59□□□□□ -0.39
CDHR3-203ENST00000466045 LAS1LQ9Y4W2 734 aaKnown RBP12.59□□□□□ -0.39
CDHR3-203ENST00000466045 PPP1R15AO75807 674 aaPredicted RBP12.59□□□□□ -0.39
CDHR3-203ENST00000466045 CLCN1P35523 988 aa12.59□□□□□ -0.39
CDHR3-203ENST00000466045 CEP170Q5SW79 1584 aa12.59□□□□□ -0.39
CDHR3-203ENST00000466045 IRX6P78412 446 aaPredicted RBP12.58□□□□□ -0.4
CDHR3-203ENST00000466045 B4GALNT3Q6L9W6 998 aa12.58□□□□□ -0.4
CDHR3-203ENST00000466045 NAP1L5Q96NT1 182 aaPredicted RBP12.58□□□□□ -0.4
CDHR3-203ENST00000466045 CLASP1Q7Z460 1538 aa12.58□□□□□ -0.4
CDHR3-203ENST00000466045 RGS3P49796 1198 aa12.57□□□□□ -0.4
CDHR3-203ENST00000466045 PAXIP1Q6ZW49 1069 aaPredicted RBP12.57□□□□□ -0.4
CDHR3-203ENST00000466045 JPH4Q96JJ6 628 aa12.57□□□□□ -0.4
CDHR3-203ENST00000466045 STAC3Q96MF2 364 aa12.57□□□□□ -0.4
CDHR3-203ENST00000466045 PNNQ9H307 717 aaKnown RBP12.56□□□□□ -0.4
CDHR3-203ENST00000466045 TIAM1Q13009 1591 aa12.56□□□□□ -0.4
CDHR3-203ENST00000466045 NFKBIBQ15653 356 aa12.55□□□□□ -0.4
CDHR3-203ENST00000466045 KIAA0586Q9BVV6 1533 aa12.55□□□□□ -0.4
CDHR3-203ENST00000466045 CANXP27824 592 aaKnown RBP12.55□□□□□ -0.4
CDHR3-203ENST00000466045 CHMP4BQ9H444 224 aaKnown RBP12.53□□□□□ -0.4
CDHR3-203ENST00000466045 CCNB3Q8WWL7 1395 aa12.52□□□□□ -0.4
CDHR3-203ENST00000466045 NCLP19338 710 aaKnown RBP12.52□□□□□ -0.4
CDHR3-203ENST00000466045 ARHGEF11O15085 1522 aa12.52□□□□□ -0.4
CDHR3-203ENST00000466045 ANP32CO43423 234 aa12.51□□□□□ -0.41
CDHR3-203ENST00000466045 TPM2P07951 284 aa12.51□□□□□ -0.41
CDHR3-203ENST00000466045 CFAP43Q8NDM7 1665 aa12.51□□□□□ -0.41
CDHR3-203ENST00000466045 CTTNBP2Q8WZ74 1663 aa12.5□□□□□ -0.41
CDHR3-203ENST00000466045 SMAP1Q8IYB5 467 aaPredicted RBP12.5□□□□□ -0.41
CDHR3-203ENST00000466045 EFCAB5A4FU69 1503 aa12.5□□□□□ -0.41
CDHR3-203ENST00000466045 PRG4Q92954 1404 aaPredicted RBP12.49□□□□□ -0.41
CDHR3-203ENST00000466045 CNGB1Q14028 1251 aaPredicted RBP12.49□□□□□ -0.41
CDHR3-203ENST00000466045 DDX10Q13206 875 aaKnown RBP12.49□□□□□ -0.41
CDHR3-203ENST00000466045 LRRC9Q6ZRR7 1453 aa12.48□□□□□ -0.41
CDHR3-203ENST00000466045 CHRM1P11229 460 aaPredicted RBP12.48□□□□□ -0.41
CDHR3-203ENST00000466045 CYB5RLQ6IPT4 315 aa12.48□□□□□ -0.41
CDHR3-203ENST00000466045 DDRGK1Q96HY6 314 aa12.48□□□□□ -0.41
CDHR3-203ENST00000466045 RIMBP3CA6NJZ7 1639 aa12.47□□□□□ -0.41
CDHR3-203ENST00000466045 RIMBP3BA6NNM3 1639 aa12.47□□□□□ -0.41
CDHR3-203ENST00000466045 RIMBP3Q9UFD9 1639 aa12.47□□□□□ -0.41
CDHR3-203ENST00000466045 PCF11O94913 1555 aaKnown RBP12.46□□□□□ -0.41
CDHR3-203ENST00000466045 IQGAP2Q13576 1575 aa12.46□□□□□ -0.41
CDHR3-203ENST00000466045 SHROOM2Q13796 1616 aa12.46□□□□□ -0.42
CDHR3-203ENST00000466045 L1TD1Q5T7N2 865 aaKnown RBP12.45□□□□□ -0.42
CDHR3-203ENST00000466045 HNRNPUQ00839 825 aaKnown RBP eCLIP12.44□□□□□ -0.42
CDHR3-203ENST00000466045 UTP14CQ5TAP6 766 aaKnown RBP12.44□□□□□ -0.42
CDHR3-203ENST00000466045 TEX2Q8IWB9 1127 aa12.44□□□□□ -0.42
CDHR3-203ENST00000466045 MAP7D2Q96T17 732 aa12.44□□□□□ -0.42
CDHR3-203ENST00000466045 FYCO1Q9BQS8 1478 aa12.44□□□□□ -0.42
CDHR3-203ENST00000466045 ERCC6L2Q5T890 1561 aa12.43□□□□□ -0.42
CDHR3-203ENST00000466045 FTSJ3Q8IY81 847 aaKnown RBP12.43□□□□□ -0.42
CDHR3-203ENST00000466045 CARMIL2Q6F5E8 1435 aa12.43□□□□□ -0.42
CDHR3-203ENST00000466045 CHMP4AQ9BY43 222 aa12.42□□□□□ -0.42
CDHR3-203ENST00000466045 TCERG1O14776 1098 aaKnown RBP12.42□□□□□ -0.42
CDHR3-203ENST00000466045 CASKIN1Q8WXD9 1431 aa12.42□□□□□ -0.42
CDHR3-203ENST00000466045 RNF123Q5XPI4 1314 aa12.41□□□□□ -0.42
CDHR3-203ENST00000466045 VGFO15240 615 aaPredicted RBP12.41□□□□□ -0.42
CDHR3-203ENST00000466045 HOMEZQ8IX15 550 aa12.41□□□□□ -0.42
CDHR3-203ENST00000466045 UGGT2Q9NYU1 1516 aa12.41□□□□□ -0.42
CDHR3-203ENST00000466045 MS4A1P11836 297 aa12.4□□□□□ -0.42
CDHR3-203ENST00000466045 ARID4BQ4LE39 1312 aaPredicted RBP12.4□□□□□ -0.42
CDHR3-203ENST00000466045 BACH2Q9BYV9 841 aa12.39□□□□□ -0.43
CDHR3-203ENST00000466045 FHOD3Q2V2M9 1422 aa12.39□□□□□ -0.43
CDHR3-203ENST00000466045 PHLDB1Q86UU1 1377 aa12.39□□□□□ -0.43
CDHR3-203ENST00000466045 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.39□□□□□ -0.43
CDHR3-203ENST00000466045 DISP1Q96F81 1524 aa12.38□□□□□ -0.43
CDHR3-203ENST00000466045 ZFP91Q96JP5 570 aaPredicted RBP12.38□□□□□ -0.43
CDHR3-203ENST00000466045 PTPRGP23470 1445 aa12.38□□□□□ -0.43
CDHR3-203ENST00000466045 FMN1Q68DA7 1419 aa12.38□□□□□ -0.43
CDHR3-203ENST00000466045 P3H3Q8IVL6 736 aa12.37□□□□□ -0.43
CDHR3-203ENST00000466045 DHX37Q8IY37 1157 aaKnown RBP12.37□□□□□ -0.43
CDHR3-203ENST00000466045 TMEM51Q9NW97 253 aa12.37□□□□□ -0.43
CDHR3-203ENST00000466045 SAMD9Q5K651 1589 aa12.37□□□□□ -0.43
CDHR3-203ENST00000466045 RAB3GAP2Q9H2M9 1393 aa12.37□□□□□ -0.43
CDHR3-203ENST00000466045 SETD5Q9C0A6 1442 aa12.37□□□□□ -0.43
CDHR3-203ENST00000466045 PDE4AP27815 886 aa12.36□□□□□ -0.43
CDHR3-203ENST00000466045 TERF1P54274 439 aa12.35□□□□□ -0.43
CDHR3-203ENST00000466045 ZBED9Q6R2W3 1325 aa12.35□□□□□ -0.43
CDHR3-203ENST00000466045 BCCIPQ9P287 314 aaKnown RBP eCLIP12.35□□□□□ -0.43
CDHR3-203ENST00000466045 MAPKBP1O60336 1514 aa12.34□□□□□ -0.43
CDHR3-203ENST00000466045 NPM2Q86SE8 214 aaKnown RBP12.34□□□□□ -0.43
CDHR3-203ENST00000466045 DMTNQ08495 405 aa12.33□□□□□ -0.44
CDHR3-203ENST00000466045 SAMD1Q6SPF0 538 aaPredicted RBP12.33□□□□□ -0.44
CDHR3-203ENST00000466045 KIAA0556O60303 1618 aa12.33□□□□□ -0.44
CDHR3-203ENST00000466045 ZNF830Q96NB3 372 aaPredicted RBP12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms