RNA–Protein interactions for RNA: ENST00000466010.1

TPM3-214, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 461 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-214ENST00000466010 KIF27Q86VH2 1401 aa10.98□□□□□ -0.65
TPM3-214ENST00000466010 CEP170Q5SW79 1584 aa10.94□□□□□ -0.66
TPM3-214ENST00000466010 SHROOM2Q13796 1616 aa10.92□□□□□ -0.66
TPM3-214ENST00000466010 SGIP1Q9BQI5 828 aa10.92□□□□□ -0.66
TPM3-214ENST00000466010 CUL7Q14999 1698 aa10.92□□□□□ -0.66
TPM3-214ENST00000466010 STK24Q9Y6E0 443 aa10.91□□□□□ -0.66
TPM3-214ENST00000466010 IGF1RP08069 1367 aa10.9□□□□□ -0.66
TPM3-214ENST00000466010 CHRM1P11229 460 aaPredicted RBP10.89□□□□□ -0.67
TPM3-214ENST00000466010 BCL11BQ9C0K0 894 aaPredicted RBP10.89□□□□□ -0.67
TPM3-214ENST00000466010 JPH4Q96JJ6 628 aa10.88□□□□□ -0.67
TPM3-214ENST00000466010 C14orf37Q86TY3 774 aa10.87□□□□□ -0.67
TPM3-214ENST00000466010 WDR70Q9NW82 654 aa10.87□□□□□ -0.67
TPM3-214ENST00000466010 RUSC2Q8N2Y8 1516 aa10.87□□□□□ -0.67
TPM3-214ENST00000466010 KIAA0586Q9BVV6 1533 aa10.87□□□□□ -0.67
TPM3-214ENST00000466010 PRG4Q92954 1404 aaPredicted RBP10.86□□□□□ -0.67
TPM3-214ENST00000466010 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.85□□□□□ -0.67
TPM3-214ENST00000466010 ZFP91Q96JP5 570 aaPredicted RBP10.85□□□□□ -0.67
TPM3-214ENST00000466010 CARMIL1Q5VZK9 1371 aa10.85□□□□□ -0.67
TPM3-214ENST00000466010 SPDYE1Q8NFV5 336 aaPredicted RBP10.84□□□□□ -0.67
TPM3-214ENST00000466010 DAXXQ9UER7 740 aaPredicted RBP10.84□□□□□ -0.67
TPM3-214ENST00000466010 ERCC6L2Q5T890 1561 aa10.82□□□□□ -0.68
TPM3-214ENST00000466010 LMOD2Q6P5Q4 547 aa10.81□□□□□ -0.68
TPM3-214ENST00000466010 HOMEZQ8IX15 550 aa10.8□□□□□ -0.68
TPM3-214ENST00000466010 CARMIL2Q6F5E8 1435 aa10.79□□□□□ -0.68
TPM3-214ENST00000466010 RAPGEF2Q9Y4G8 1499 aa10.78□□□□□ -0.68
TPM3-214ENST00000466010 PRR29P0C7W0 189 aa10.77□□□□□ -0.69
TPM3-214ENST00000466010 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.76□□□□□ -0.69
TPM3-214ENST00000466010 IQGAP2Q13576 1575 aa10.76□□□□□ -0.69
TPM3-214ENST00000466010 KCNV2Q8TDN2 545 aa10.75□□□□□ -0.69
TPM3-214ENST00000466010 CREBZFQ9NS37 354 aa10.75□□□□□ -0.69
TPM3-214ENST00000466010 RASEFQ8IZ41 740 aa10.74□□□□□ -0.69
TPM3-214ENST00000466010 TNIKQ9UKE5 1360 aa10.74□□□□□ -0.69
TPM3-214ENST00000466010 PTPRGP23470 1445 aa10.74□□□□□ -0.69
TPM3-214ENST00000466010 PYGBP11216 843 aa10.73□□□□□ -0.69
TPM3-214ENST00000466010 CLEC11AQ9Y240 323 aa10.73□□□□□ -0.69
TPM3-214ENST00000466010 MAPKBP1O60336 1514 aa10.73□□□□□ -0.69
TPM3-214ENST00000466010 MNX1P50219 401 aaPredicted RBP10.71□□□□□ -0.69
TPM3-214ENST00000466010 UGGT2Q9NYU1 1516 aa10.7□□□□□ -0.7
TPM3-214ENST00000466010 ADCY10Q96PN6 1610 aa10.69□□□□□ -0.7
TPM3-214ENST00000466010 ABCC10Q5T3U5 1492 aa10.69□□□□□ -0.7
TPM3-214ENST00000466010 EEA1Q15075 1411 aa10.69□□□□□ -0.7
TPM3-214ENST00000466010 UHRF1BP1LA0JNW5 1464 aa10.68□□□□□ -0.7
TPM3-214ENST00000466010 GOLGA3Q08378 1498 aa10.68□□□□□ -0.7
TPM3-214ENST00000466010 PRXQ9BXM0 1461 aa10.68□□□□□ -0.7
TPM3-214ENST00000466010 ZNF467Q7Z7K2 595 aaPredicted RBP10.68□□□□□ -0.7
TPM3-214ENST00000466010 FAM9AQ8IZU1 332 aaPredicted RBP10.68□□□□□ -0.7
TPM3-214ENST00000466010 AKT1S1Q96B36 256 aa10.68□□□□□ -0.7
TPM3-214ENST00000466010 RBM42Q9BTD8 480 aaKnown RBP10.68□□□□□ -0.7
TPM3-214ENST00000466010 ABCC2Q92887 1545 aa10.67□□□□□ -0.7
TPM3-214ENST00000466010 DISP1Q96F81 1524 aa10.67□□□□□ -0.7
TPM3-214ENST00000466010 UACAQ9BZF9 1416 aa10.67□□□□□ -0.7
TPM3-214ENST00000466010 BRPF1P55201 1214 aaPredicted RBP10.66□□□□□ -0.7
TPM3-214ENST00000466010 FAM69CQ0P6D2 419 aa10.65□□□□□ -0.7
TPM3-214ENST00000466010 CTTNBP2Q8WZ74 1663 aa10.64□□□□□ -0.71
TPM3-214ENST00000466010 PLB1Q6P1J6 1458 aa10.64□□□□□ -0.71
TPM3-214ENST00000466010 CADPS2Q86UW7 1296 aa10.64□□□□□ -0.71
TPM3-214ENST00000466010 KIAA0556O60303 1618 aa10.64□□□□□ -0.71
TPM3-214ENST00000466010 ARHGEF1Q92888 912 aaKnown RBP10.63□□□□□ -0.71
TPM3-214ENST00000466010 DIP2BQ9P265 1576 aa10.63□□□□□ -0.71
TPM3-214ENST00000466010 KIF13AQ9H1H9 1805 aa10.63□□□□□ -0.71
TPM3-214ENST00000466010 NEUROD2Q15784 382 aa10.62□□□□□ -0.71
TPM3-214ENST00000466010 PDAP1Q13442 181 aaKnown RBP10.61□□□□□ -0.71
TPM3-214ENST00000466010 KDM5BQ9UGL1 1544 aa10.61□□□□□ -0.71
TPM3-214ENST00000466010 TTBK1Q5TCY1 1321 aaPredicted RBP10.6□□□□□ -0.71
TPM3-214ENST00000466010 ASXL2Q76L83 1435 aa10.6□□□□□ -0.71
TPM3-214ENST00000466010 ZC3H15Q8WU90 426 aaKnown RBP10.6□□□□□ -0.71
TPM3-214ENST00000466010 GLI2P10070 1586 aa10.57□□□□□ -0.72
TPM3-214ENST00000466010 E2F4Q16254 413 aa10.56□□□□□ -0.72
TPM3-214ENST00000466010 SMYD5Q6GMV2 418 aa10.54□□□□□ -0.72
TPM3-214ENST00000466010 ZCCHC11Q5TAX3 1644 aaKnown RBP10.54□□□□□ -0.72
TPM3-214ENST00000466010 TEX14Q8IWB6 1497 aa10.54□□□□□ -0.72
TPM3-214ENST00000466010 WDR7Q9Y4E6 1490 aa10.54□□□□□ -0.72
TPM3-214ENST00000466010 EPRSP07814 1512 aaKnown RBP10.53□□□□□ -0.72
TPM3-214ENST00000466010 ABCA8O94911 1581 aa10.53□□□□□ -0.72
TPM3-214ENST00000466010 REM2Q8IYK8 340 aaPredicted RBP10.53□□□□□ -0.72
TPM3-214ENST00000466010 KDM6BO15054 1643 aa10.52□□□□□ -0.73
TPM3-214ENST00000466010 KIF21BO75037 1637 aa10.52□□□□□ -0.73
TPM3-214ENST00000466010 TESPA1A2RU30 521 aaPredicted RBP10.52□□□□□ -0.73
TPM3-214ENST00000466010 SLC24A3Q9HC58 644 aa10.52□□□□□ -0.73
TPM3-214ENST00000466010 SAMD9Q5K651 1589 aa10.52□□□□□ -0.73
TPM3-214ENST00000466010 MFRPQ9BY79 579 aa10.51□□□□□ -0.73
TPM3-214ENST00000466010 TSPYL2Q9H2G4 693 aaPredicted RBP10.5□□□□□ -0.73
TPM3-214ENST00000466010 EFCAB5A4FU69 1503 aa10.49□□□□□ -0.73
TPM3-214ENST00000466010 MAP3K4Q9Y6R4 1608 aa10.49□□□□□ -0.73
TPM3-214ENST00000466010 PSEN1P49768 467 aa10.49□□□□□ -0.73
TPM3-214ENST00000466010 CACNB1Q02641 598 aaPredicted RBP10.49□□□□□ -0.73
TPM3-214ENST00000466010 SEMA3EO15041 775 aa10.48□□□□□ -0.73
TPM3-214ENST00000466010 NLRP6P59044 892 aa10.47□□□□□ -0.73
TPM3-214ENST00000466010 TSPOAP1O95153 1857 aa10.47□□□□□ -0.73
TPM3-214ENST00000466010 ZNF579Q8NAF0 562 aaKnown RBP10.46□□□□□ -0.73
TPM3-214ENST00000466010 PCDHB8Q9UN66 801 aa10.46□□□□□ -0.73
TPM3-214ENST00000466010 PCDHB13Q9Y5F0 798 aa10.46□□□□□ -0.73
TPM3-214ENST00000466010 MAGI3Q5TCQ9 1506 aa10.46□□□□□ -0.74
TPM3-214ENST00000466010 CFAP43Q8NDM7 1665 aa10.45□□□□□ -0.74
TPM3-214ENST00000466010 CD109Q6YHK3 1445 aa10.45□□□□□ -0.74
TPM3-214ENST00000466010 POTEDQ86YR6 584 aa10.45□□□□□ -0.74
TPM3-214ENST00000466010 RAPGEF6Q8TEU7 1601 aa10.44□□□□□ -0.74
TPM3-214ENST00000466010 ATP10BO94823 1461 aa10.44□□□□□ -0.74
TPM3-214ENST00000466010 PHLDB1Q86UU1 1377 aa10.44□□□□□ -0.74
TPM3-214ENST00000466010 PPRC1Q5VV67 1664 aaKnown RBP10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms