RNA–Protein interactions for RNA: ENST00000465950.5

SCAF11-205, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 5,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-205ENST00000465950 PLEKHH2Q8IVE3 1493 aa12.52□□□□□ -0.41
SCAF11-205ENST00000465950 HDAC5Q9UQL6 1122 aa12.52□□□□□ -0.41
SCAF11-205ENST00000465950 STAC3Q96MF2 364 aa12.51□□□□□ -0.41
SCAF11-205ENST00000465950 TOM1O60784 492 aa12.5□□□□□ -0.41
SCAF11-205ENST00000465950 TERF2IPQ9NYB0 399 aa12.49□□□□□ -0.41
SCAF11-205ENST00000465950 PPP6R1Q9UPN7 881 aa12.49□□□□□ -0.41
SCAF11-205ENST00000465950 DNAJC5BQ9UF47 199 aa12.49□□□□□ -0.41
SCAF11-205ENST00000465950 FGD5Q6ZNL6 1462 aa12.48□□□□□ -0.41
SCAF11-205ENST00000465950 ARHGAP35Q9NRY4 1499 aa12.48□□□□□ -0.41
SCAF11-205ENST00000465950 PROSER2Q86WR7 435 aaPredicted RBP12.48□□□□□ -0.41
SCAF11-205ENST00000465950 RTF1Q92541 710 aaKnown RBP12.47□□□□□ -0.41
SCAF11-205ENST00000465950 CFTRP13569 1480 aa12.47□□□□□ -0.41
SCAF11-205ENST00000465950 TMF1P82094 1093 aa12.46□□□□□ -0.41
SCAF11-205ENST00000465950 SETD5Q9C0A6 1442 aa12.46□□□□□ -0.41
SCAF11-205ENST00000465950 MSH5O43196 834 aa12.46□□□□□ -0.42
SCAF11-205ENST00000465950 MAGI1Q96QZ7 1491 aaPredicted RBP12.45□□□□□ -0.42
SCAF11-205ENST00000465950 AQRO60306 1485 aaKnown RBP eCLIP12.45□□□□□ -0.42
SCAF11-205ENST00000465950 CALD1Q05682 793 aaKnown RBP12.45□□□□□ -0.42
SCAF11-205ENST00000465950 PPM1GO15355 546 aaPredicted RBP12.44□□□□□ -0.42
SCAF11-205ENST00000465950 CARD11Q9BXL7 1154 aa12.43□□□□□ -0.42
SCAF11-205ENST00000465950 AKNAQ7Z591 1439 aa12.43□□□□□ -0.42
SCAF11-205ENST00000465950 PLB1Q6P1J6 1458 aa12.42□□□□□ -0.42
SCAF11-205ENST00000465950 GTF2E1P29083 439 aaPredicted RBP12.41□□□□□ -0.42
SCAF11-205ENST00000465950 GPRASP1Q5JY77 1395 aa12.41□□□□□ -0.42
SCAF11-205ENST00000465950 STK26Q9P289 416 aa12.4□□□□□ -0.42
SCAF11-205ENST00000465950 CDK11BP21127 795 aaKnown RBP12.4□□□□□ -0.42
SCAF11-205ENST00000465950 MS4A1P11836 297 aa12.39□□□□□ -0.43
SCAF11-205ENST00000465950 NUP155O75694 1391 aa12.38□□□□□ -0.43
SCAF11-205ENST00000465950 HNRNPMP52272 730 aaKnown RBP eCLIP12.38□□□□□ -0.43
SCAF11-205ENST00000465950 SNAPC4Q5SXM2 1469 aa12.38□□□□□ -0.43
SCAF11-205ENST00000465950 DNMBPQ6XZF7 1577 aa12.37□□□□□ -0.43
SCAF11-205ENST00000465950 HSP90B1P14625 803 aaKnown RBP12.36□□□□□ -0.43
SCAF11-205ENST00000465950 AMPHP49418 695 aa12.36□□□□□ -0.43
SCAF11-205ENST00000465950 TXNDC2Q86VQ3 553 aa12.36□□□□□ -0.43
SCAF11-205ENST00000465950 PPP1R1BQ9UD71 204 aaPredicted RBP12.35□□□□□ -0.43
SCAF11-205ENST00000465950 PIP4K2BP78356 416 aa12.34□□□□□ -0.43
SCAF11-205ENST00000465950 TOPBP1Q92547 1522 aa12.34□□□□□ -0.43
SCAF11-205ENST00000465950 DNAJC5Q9H3Z4 198 aa12.33□□□□□ -0.44
SCAF11-205ENST00000465950 SLC52A1Q9NWF4 448 aa12.33□□□□□ -0.44
SCAF11-205ENST00000465950 CD109Q6YHK3 1445 aa12.32□□□□□ -0.44
SCAF11-205ENST00000465950 LRPPRCP42704 1394 aaKnown RBP12.32□□□□□ -0.44
SCAF11-205ENST00000465950 YTHDC1Q96MU7 727 aaKnown RBP12.31□□□□□ -0.44
SCAF11-205ENST00000465950 LMOD3Q0VAK6 560 aa12.31□□□□□ -0.44
SCAF11-205ENST00000465950 KLHL34Q8N239 644 aa12.31□□□□□ -0.44
SCAF11-205ENST00000465950 UPF2Q9HAU5 1272 aaKnown RBP12.31□□□□□ -0.44
SCAF11-205ENST00000465950 TIMELESSQ9UNS1 1208 aa12.31□□□□□ -0.44
SCAF11-205ENST00000465950 RAD54L2Q9Y4B4 1467 aa12.3□□□□□ -0.44
SCAF11-205ENST00000465950 WIZO95785 1651 aa12.3□□□□□ -0.44
SCAF11-205ENST00000465950 DCAF11Q8TEB1 546 aa12.3□□□□□ -0.44
SCAF11-205ENST00000465950 WDHD1O75717 1129 aaPredicted RBP12.3□□□□□ -0.44
SCAF11-205ENST00000465950 C1orf141Q5JVX7 400 aa12.3□□□□□ -0.44
SCAF11-205ENST00000465950 WWC1Q8IX03 1113 aa12.3□□□□□ -0.44
SCAF11-205ENST00000465950 UBAP1LF5GYI3 381 aa12.3□□□□□ -0.44
SCAF11-205ENST00000465950 PKD2Q13563 968 aa12.3□□□□□ -0.44
SCAF11-205ENST00000465950 NESP48681 1621 aa12.29□□□□□ -0.44
SCAF11-205ENST00000465950 KIAA0586Q9BVV6 1533 aa12.29□□□□□ -0.44
SCAF11-205ENST00000465950 DHX57Q6P158 1386 aaKnown RBP12.29□□□□□ -0.44
SCAF11-205ENST00000465950 MORC1Q86VD1 984 aa12.29□□□□□ -0.44
SCAF11-205ENST00000465950 ARHGAP5Q13017 1502 aa12.28□□□□□ -0.44
SCAF11-205ENST00000465950 PDE3BQ13370 1112 aa12.28□□□□□ -0.44
SCAF11-205ENST00000465950 NGLY1Q96IV0 654 aa12.28□□□□□ -0.44
SCAF11-205ENST00000465950 BCL11AQ9H165 835 aa12.28□□□□□ -0.44
SCAF11-205ENST00000465950 EVC2Q86UK5 1308 aa12.26□□□□□ -0.45
SCAF11-205ENST00000465950 MYOM3Q5VTT5 1437 aa12.26□□□□□ -0.45
SCAF11-205ENST00000465950 SOX12O15370 315 aa12.25□□□□□ -0.45
SCAF11-205ENST00000465950 SAFB2Q14151 953 aaKnown RBP eCLIP12.25□□□□□ -0.45
SCAF11-205ENST00000465950 FHOD3Q2V2M9 1422 aa12.24□□□□□ -0.45
SCAF11-205ENST00000465950 CASC1Q6TDU7 716 aa12.24□□□□□ -0.45
SCAF11-205ENST00000465950 U2SURPO15042 1029 aaKnown RBP12.24□□□□□ -0.45
SCAF11-205ENST00000465950 TTC5Q8N0Z6 440 aa12.24□□□□□ -0.45
SCAF11-205ENST00000465950 RAPGEF4Q8WZA2 1011 aa12.24□□□□□ -0.45
SCAF11-205ENST00000465950 COG3Q96JB2 828 aa12.24□□□□□ -0.45
SCAF11-205ENST00000465950 NUTM2BA6NNL0 878 aaPredicted RBP12.24□□□□□ -0.45
SCAF11-205ENST00000465950 NUTM2EB1AL46 878 aaPredicted RBP12.24□□□□□ -0.45
SCAF11-205ENST00000465950 OS9Q13438 667 aaPredicted RBP12.24□□□□□ -0.45
SCAF11-205ENST00000465950 NUTM2DQ5VT03 806 aaPredicted RBP12.24□□□□□ -0.45
SCAF11-205ENST00000465950 NUTM2AQ8IVF1 878 aaPredicted RBP12.24□□□□□ -0.45
SCAF11-205ENST00000465950 NBPF8Q3BBV2 869 aa12.23□□□□□ -0.45
SCAF11-205ENST00000465950 NBPF14Q5TI25 921 aa12.23□□□□□ -0.45
SCAF11-205ENST00000465950 DENND4BO75064 1496 aaPredicted RBP12.23□□□□□ -0.45
SCAF11-205ENST00000465950 TAF7LQ5H9L4 462 aa12.23□□□□□ -0.45
SCAF11-205ENST00000465950 IGF1RP08069 1367 aa12.22□□□□□ -0.45
SCAF11-205ENST00000465950 CCDC144AA2RUR9 1427 aa12.22□□□□□ -0.45
SCAF11-205ENST00000465950 CWC22Q9HCG8 908 aaKnown RBP12.22□□□□□ -0.45
SCAF11-205ENST00000465950 ROCK1Q13464 1354 aa12.22□□□□□ -0.45
SCAF11-205ENST00000465950 C11orf95C9JLR9 678 aaPredicted RBP12.21□□□□□ -0.45
SCAF11-205ENST00000465950 ZNF330Q9Y3S2 320 aaPredicted RBP12.21□□□□□ -0.46
SCAF11-205ENST00000465950 VPS8Q8N3P4 1428 aa12.2□□□□□ -0.46
SCAF11-205ENST00000465950 MIA2Q96PC5 1412 aa12.2□□□□□ -0.46
SCAF11-205ENST00000465950 CADPS2Q86UW7 1296 aa12.2□□□□□ -0.46
SCAF11-205ENST00000465950 POLA1P09884 1462 aaPredicted RBP12.2□□□□□ -0.46
SCAF11-205ENST00000465950 CFAP44Q96MT7 982 aa12.2□□□□□ -0.46
SCAF11-205ENST00000465950 NOL10Q9BSC4 688 aaKnown RBP12.2□□□□□ -0.46
SCAF11-205ENST00000465950 SCAPERQ9BY12 1400 aa12.19□□□□□ -0.46
SCAF11-205ENST00000465950 RPGRIP1LQ68CZ1 1315 aa12.19□□□□□ -0.46
SCAF11-205ENST00000465950 STK31Q9BXU1 1019 aa12.18□□□□□ -0.46
SCAF11-205ENST00000465950 CUX1P39880 1505 aa12.18□□□□□ -0.46
SCAF11-205ENST00000465950 MSH6P52701 1360 aa12.17□□□□□ -0.46
SCAF11-205ENST00000465950 FANCAO15360 1455 aa12.17□□□□□ -0.46
SCAF11-205ENST00000465950 TRIM34Q9BYJ4 488 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms