RNA–Protein interactions for RNA: ENST00000465423.5

PCCB-206, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 4

Gene PCCB, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-206ENST00000465423 HECW1Q76N89 1606 aa23.31■■□□□ 1.32
PCCB-206ENST00000465423 SCAPERQ9BY12 1400 aa23.29■■□□□ 1.32
PCCB-206ENST00000465423 FMN1Q68DA7 1419 aa23.26■■□□□ 1.31
PCCB-206ENST00000465423 ARHGAP35Q9NRY4 1499 aa23.24■■□□□ 1.31
PCCB-206ENST00000465423 HSPA2P54652 639 aa23.23■■□□□ 1.31
PCCB-206ENST00000465423 EFCAB2Q5VUJ9 269 aa23.23■■□□□ 1.31
PCCB-206ENST00000465423 ATP10AO60312 1499 aa23.23■■□□□ 1.31
PCCB-206ENST00000465423 MYO5CQ9NQX4 1742 aa23.22■■□□□ 1.31
PCCB-206ENST00000465423 FER1L4A9Z1Z3 1794 aa23.22■■□□□ 1.31
PCCB-206ENST00000465423 ARHGEF12Q9NZN5 1544 aa23.2■■□□□ 1.3
PCCB-206ENST00000465423 MLECQ14165 292 aa23.2■■□□□ 1.3
PCCB-206ENST00000465423 CDK11AQ9UQ88 783 aaPredicted RBP23.2■■□□□ 1.3
PCCB-206ENST00000465423 CEP162Q5TB80 1403 aa23.19■■□□□ 1.3
PCCB-206ENST00000465423 CLIP1P30622 1438 aa23.18■■□□□ 1.3
PCCB-206ENST00000465423 ATP1B4Q9UN42 357 aaPredicted RBP23.18■■□□□ 1.3
PCCB-206ENST00000465423 KIF14Q15058 1648 aa23.18■■□□□ 1.3
PCCB-206ENST00000465423 C9orf84Q5VXU9 1444 aa23.16■■□□□ 1.3
PCCB-206ENST00000465423 PLPPR3Q6T4P5 718 aa23.16■■□□□ 1.3
PCCB-206ENST00000465423 TROQ12816 1431 aaPredicted RBP23.16■■□□□ 1.3
PCCB-206ENST00000465423 LRRIQ1Q96JM4 1722 aa23.13■■□□□ 1.29
PCCB-206ENST00000465423 ZNF518AQ6AHZ1 1483 aa23.13■■□□□ 1.29
PCCB-206ENST00000465423 KDM5CP41229 1560 aa23.13■■□□□ 1.29
PCCB-206ENST00000465423 AFAP1Q8N556 730 aa23.12■■□□□ 1.29
PCCB-206ENST00000465423 ARHGAP5Q13017 1502 aa23.08■■□□□ 1.29
PCCB-206ENST00000465423 CDC42BPBQ9Y5S2 1711 aa23.08■■□□□ 1.29
PCCB-206ENST00000465423 PREX1Q8TCU6 1659 aa23.08■■□□□ 1.29
PCCB-206ENST00000465423 CEBPAP49715 358 aaPredicted RBP23.07■■□□□ 1.28
PCCB-206ENST00000465423 CERKQ8TCT0 537 aa23.07■■□□□ 1.28
PCCB-206ENST00000465423 SETD1BQ9UPS6 1966 aaKnown RBP23.07■■□□□ 1.28
PCCB-206ENST00000465423 REREQ9P2R6 1566 aa23.06■■□□□ 1.28
PCCB-206ENST00000465423 DIP2CQ9Y2E4 1556 aa23.05■■□□□ 1.28
PCCB-206ENST00000465423 MLH3Q9UHC1 1453 aa23.05■■□□□ 1.28
PCCB-206ENST00000465423 STRCQ7RTU9 1775 aa23.01■■□□□ 1.27
PCCB-206ENST00000465423 CASKIN1Q8WXD9 1431 aa23■■□□□ 1.27
PCCB-206ENST00000465423 PREX2Q70Z35 1606 aa23■■□□□ 1.27
PCCB-206ENST00000465423 ABCA6Q8N139 1617 aa23■■□□□ 1.27
PCCB-206ENST00000465423 TRAPPC8Q9Y2L5 1435 aa22.99■■□□□ 1.27
PCCB-206ENST00000465423 AGLP35573 1532 aa22.98■■□□□ 1.27
PCCB-206ENST00000465423 CCDC18Q5T9S5 1454 aa22.98■■□□□ 1.27
PCCB-206ENST00000465423 ABCC1P33527 1531 aa22.98■■□□□ 1.27
PCCB-206ENST00000465423 DMRT2Q9Y5R5 561 aa22.96■■□□□ 1.27
PCCB-206ENST00000465423 UHRF1BP1Q6BDS2 1440 aa22.95■■□□□ 1.26
PCCB-206ENST00000465423 ITSN2Q9NZM3 1697 aa22.95■■□□□ 1.26
PCCB-206ENST00000465423 MYT1LQ9UL68 1186 aa22.95■■□□□ 1.26
PCCB-206ENST00000465423 C3P01024 1663 aa22.94■■□□□ 1.26
PCCB-206ENST00000465423 KIDINS220Q9ULH0 1771 aa22.94■■□□□ 1.26
PCCB-206ENST00000465423 CDC42BPAQ5VT25 1732 aa22.94■■□□□ 1.26
PCCB-206ENST00000465423 VPS8Q8N3P4 1428 aa22.91■■□□□ 1.26
PCCB-206ENST00000465423 FYCO1Q9BQS8 1478 aa22.87■■□□□ 1.25
PCCB-206ENST00000465423 PTPRTO14522 1441 aa22.87■■□□□ 1.25
PCCB-206ENST00000465423 SAMD9LQ8IVG5 1584 aa22.85■■□□□ 1.25
PCCB-206ENST00000465423 CNTLNQ9NXG0 1405 aa22.84■■□□□ 1.25
PCCB-206ENST00000465423 GPATCH8Q9UKJ3 1502 aaKnown RBP22.84■■□□□ 1.25
PCCB-206ENST00000465423 ESF1Q9H501 851 aaKnown RBP22.84■■□□□ 1.25
PCCB-206ENST00000465423 MROH2AA6NES4 1674 aa22.79■■□□□ 1.24
PCCB-206ENST00000465423 ZNF777Q9ULD5 760 aaPredicted RBP22.79■■□□□ 1.24
PCCB-206ENST00000465423 SYCP2Q9BX26 1530 aa22.78■■□□□ 1.24
PCCB-206ENST00000465423 HNRNPMP52272 730 aaKnown RBP eCLIP22.78■■□□□ 1.24
PCCB-206ENST00000465423 NPATQ14207 1427 aa22.78■■□□□ 1.24
PCCB-206ENST00000465423 NCOA1Q15788 1441 aa22.78■■□□□ 1.24
PCCB-206ENST00000465423 KIAA1107Q9UPP5 1409 aa22.78■■□□□ 1.24
PCCB-206ENST00000465423 SPAG9O60271 1321 aaKnown RBP22.78■■□□□ 1.24
PCCB-206ENST00000465423 LTBP4Q8N2S1 1624 aa22.77■■□□□ 1.24
PCCB-206ENST00000465423 ZMYM3Q14202 1370 aa22.76■■□□□ 1.23
PCCB-206ENST00000465423 SUPT6HQ7KZ85 1726 aaKnown RBP22.74■■□□□ 1.23
PCCB-206ENST00000465423 PLEKHH2Q8IVE3 1493 aa22.73■■□□□ 1.23
PCCB-206ENST00000465423 ATP7AQ04656 1500 aa22.73■■□□□ 1.23
PCCB-206ENST00000465423 PLXNC1O60486 1568 aa22.73■■□□□ 1.23
PCCB-206ENST00000465423 INO80Q9ULG1 1556 aaPredicted RBP22.72■■□□□ 1.23
PCCB-206ENST00000465423 CFDP1Q9UEE9 299 aaPredicted RBP22.72■■□□□ 1.23
PCCB-206ENST00000465423 IQSEC2Q5JU85 1478 aa22.7■■□□□ 1.22
PCCB-206ENST00000465423 CAMSAP1Q5T5Y3 1602 aa22.7■■□□□ 1.22
PCCB-206ENST00000465423 A2MP01023 1474 aa22.69■■□□□ 1.22
PCCB-206ENST00000465423 CCNB3Q8WWL7 1395 aa22.69■■□□□ 1.22
PCCB-206ENST00000465423 MAP3K1Q13233 1512 aa22.68■■□□□ 1.22
PCCB-206ENST00000465423 DISP3Q9P2K9 1392 aa22.68■■□□□ 1.22
PCCB-206ENST00000465423 CLTCQ00610 1675 aaKnown RBP22.68■■□□□ 1.22
PCCB-206ENST00000465423 APLP2Q06481 763 aa22.66■■□□□ 1.22
PCCB-206ENST00000465423 PTPRKQ15262 1439 aa22.65■■□□□ 1.22
PCCB-206ENST00000465423 PPP6R1Q9UPN7 881 aa22.65■■□□□ 1.22
PCCB-206ENST00000465423 ZNF142P52746 1687 aaPredicted RBP22.65■■□□□ 1.22
PCCB-206ENST00000465423 MTUS2Q5JR59 1369 aa22.63■■□□□ 1.21
PCCB-206ENST00000465423 NCKAP5LQ9HCH0 1330 aa22.63■■□□□ 1.21
PCCB-206ENST00000465423 ADGBQ8N7X0 1667 aa22.63■■□□□ 1.21
PCCB-206ENST00000465423 MBD5Q9P267 1494 aa22.63■■□□□ 1.21
PCCB-206ENST00000465423 ILDR2Q71H61 639 aa22.63■■□□□ 1.21
PCCB-206ENST00000465423 TIAM1Q13009 1591 aa22.63■■□□□ 1.21
PCCB-206ENST00000465423 ZNF644Q9H582 1327 aaPredicted RBP22.62■■□□□ 1.21
PCCB-206ENST00000465423 GGT6Q6P531 493 aa22.62■■□□□ 1.21
PCCB-206ENST00000465423 PLA2R1Q13018 1463 aa22.61■■□□□ 1.21
PCCB-206ENST00000465423 MYO3AQ8NEV4 1616 aa22.61■■□□□ 1.21
PCCB-206ENST00000465423 TCOF1Q13428 1488 aaKnown RBP22.6■■□□□ 1.21
PCCB-206ENST00000465423 PKD2Q13563 968 aa22.59■■□□□ 1.21
PCCB-206ENST00000465423 CEP170BQ9Y4F5 1589 aaPredicted RBP22.59■■□□□ 1.21
PCCB-206ENST00000465423 RTEL1-TNFRSF6BF6WH68 1400 aa22.58■■□□□ 1.21
PCCB-206ENST00000465423 SOCS7O14512 581 aa22.57■■□□□ 1.2
PCCB-206ENST00000465423 ZNF335Q9H4Z2 1342 aaPredicted RBP22.57■■□□□ 1.2
PCCB-206ENST00000465423 EHBP1L1Q8N3D4 1523 aa22.56■■□□□ 1.2
PCCB-206ENST00000465423 DHX29Q7Z478 1369 aaKnown RBP22.55■■□□□ 1.2
PCCB-206ENST00000465423 SPATA31D1Q6ZQQ2 1576 aa22.54■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms