RNA–Protein interactions for RNA: ENST00000465301.2

RTL9-201, Transcript of retrotransposon Gag like 9, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RTL9, Length 5,426 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9-201ENST00000465301 CCNB3Q8WWL7 1395 aa10.38□□□□□ -0.75
RTL9-201ENST00000465301 RGS3P49796 1198 aa10.38□□□□□ -0.75
RTL9-201ENST00000465301 MORC1Q86VD1 984 aa10.38□□□□□ -0.75
RTL9-201ENST00000465301 SYAP1Q96A49 352 aaPredicted RBP10.37□□□□□ -0.75
RTL9-201ENST00000465301 KRI1Q8N9T8 703 aaKnown RBP10.37□□□□□ -0.75
RTL9-201ENST00000465301 GORABQ5T7V8 394 aa10.37□□□□□ -0.75
RTL9-201ENST00000465301 KIF27Q86VH2 1401 aa10.36□□□□□ -0.75
RTL9-201ENST00000465301 CSPP1Q1MSJ5 1256 aa10.36□□□□□ -0.75
RTL9-201ENST00000465301 TAF7LQ5H9L4 462 aa10.35□□□□□ -0.75
RTL9-201ENST00000465301 CHMP4CQ96CF2 233 aa10.35□□□□□ -0.75
RTL9-201ENST00000465301 SPAG9O60271 1321 aaKnown RBP10.35□□□□□ -0.75
RTL9-201ENST00000465301 A0A0U1RQG5 324 aaPredicted RBP10.35□□□□□ -0.75
RTL9-201ENST00000465301 GOLGA6L1Q8N7Z2 621 aa10.34□□□□□ -0.75
RTL9-201ENST00000465301 GBP4Q96PP9 640 aa10.34□□□□□ -0.75
RTL9-201ENST00000465301 CCDC9Q9Y3X0 531 aaKnown RBP10.34□□□□□ -0.75
RTL9-201ENST00000465301 CC2D1BQ5T0F9 858 aaKnown RBP10.34□□□□□ -0.75
RTL9-201ENST00000465301 RB1CC1Q8TDY2 1594 aa10.33□□□□□ -0.76
RTL9-201ENST00000465301 HIRIP3Q9BW71 556 aaPredicted RBP10.33□□□□□ -0.76
RTL9-201ENST00000465301 STK31Q9BXU1 1019 aa10.33□□□□□ -0.76
RTL9-201ENST00000465301 KIF3AQ9Y496 699 aa10.32□□□□□ -0.76
RTL9-201ENST00000465301 RASSF8Q8NHQ8 419 aa10.32□□□□□ -0.76
RTL9-201ENST00000465301 MLECQ14165 292 aa10.32□□□□□ -0.76
RTL9-201ENST00000465301 HMMRO75330 724 aa10.31□□□□□ -0.76
RTL9-201ENST00000465301 NOP58Q9Y2X3 529 aaKnown RBP10.31□□□□□ -0.76
RTL9-201ENST00000465301 PAK3O75914 559 aaPredicted RBP10.31□□□□□ -0.76
RTL9-201ENST00000465301 MIER1Q8N108 512 aa10.31□□□□□ -0.76
RTL9-201ENST00000465301 FHAD1B1AJZ9 1412 aa10.31□□□□□ -0.76
RTL9-201ENST00000465301 EIF3AQ14152 1382 aaKnown RBP10.31□□□□□ -0.76
RTL9-201ENST00000465301 SOX12O15370 315 aa10.3□□□□□ -0.76
RTL9-201ENST00000465301 ZNF330Q9Y3S2 320 aaPredicted RBP10.3□□□□□ -0.76
RTL9-201ENST00000465301 MARCH6O60337 910 aa10.3□□□□□ -0.76
RTL9-201ENST00000465301 TPM3P06753 285 aa10.3□□□□□ -0.76
RTL9-201ENST00000465301 RWDD1Q9H446 243 aaPredicted RBP10.3□□□□□ -0.76
RTL9-201ENST00000465301 EID1Q9Y6B2 187 aa10.29□□□□□ -0.76
RTL9-201ENST00000465301 SUPT16HQ9Y5B9 1047 aaKnown RBP10.29□□□□□ -0.76
RTL9-201ENST00000465301 HSP90B1P14625 803 aaKnown RBP10.29□□□□□ -0.76
RTL9-201ENST00000465301 LMOD3Q0VAK6 560 aa10.29□□□□□ -0.76
RTL9-201ENST00000465301 TIMELESSQ9UNS1 1208 aa10.28□□□□□ -0.76
RTL9-201ENST00000465301 KTN1Q86UP2 1357 aaKnown RBP10.28□□□□□ -0.76
RTL9-201ENST00000465301 CEP164Q9UPV0 1460 aa10.28□□□□□ -0.76
RTL9-201ENST00000465301 BAZ1BQ9UIG0 1483 aaKnown RBP10.27□□□□□ -0.76
RTL9-201ENST00000465301 DCAF11Q8TEB1 546 aa10.27□□□□□ -0.76
RTL9-201ENST00000465301 GTF2E1P29083 439 aaPredicted RBP10.27□□□□□ -0.77
RTL9-201ENST00000465301 CHMP3Q9Y3E7 222 aa10.27□□□□□ -0.77
RTL9-201ENST00000465301 TPM2P07951 284 aa10.27□□□□□ -0.77
RTL9-201ENST00000465301 FRAT2O75474 233 aaPredicted RBP10.26□□□□□ -0.77
RTL9-201ENST00000465301 VPS53Q5VIR6 699 aa10.26□□□□□ -0.77
RTL9-201ENST00000465301 AMOTL1Q8IY63 956 aa10.26□□□□□ -0.77
RTL9-201ENST00000465301 ANO8Q9HCE9 1232 aaPredicted RBP10.26□□□□□ -0.77
RTL9-201ENST00000465301 CTDP1Q9Y5B0 961 aaPredicted RBP10.26□□□□□ -0.77
RTL9-201ENST00000465301 CARMIL2Q6F5E8 1435 aa10.26□□□□□ -0.77
RTL9-201ENST00000465301 PMFBP1Q8TBY8 1022 aa10.25□□□□□ -0.77
RTL9-201ENST00000465301 TERF2IPQ9NYB0 399 aa10.25□□□□□ -0.77
RTL9-201ENST00000465301 WRNQ14191 1432 aaPredicted RBP eCLIP10.25□□□□□ -0.77
RTL9-201ENST00000465301 LRRFIP1Q32MZ4 808 aaKnown RBP10.25□□□□□ -0.77
RTL9-201ENST00000465301 TCEAL9Q9UHQ7 104 aa10.25□□□□□ -0.77
RTL9-201ENST00000465301 CEP162Q5TB80 1403 aa10.25□□□□□ -0.77
RTL9-201ENST00000465301 NOL10Q9BSC4 688 aaKnown RBP10.24□□□□□ -0.77
RTL9-201ENST00000465301 PHF14O94880 888 aa10.24□□□□□ -0.77
RTL9-201ENST00000465301 TSR1Q2NL82 804 aaKnown RBP10.24□□□□□ -0.77
RTL9-201ENST00000465301 TCERG1O14776 1098 aaKnown RBP10.24□□□□□ -0.77
RTL9-201ENST00000465301 TRIM34Q9BYJ4 488 aa10.24□□□□□ -0.77
RTL9-201ENST00000465301 GGT6Q6P531 493 aa10.23□□□□□ -0.77
RTL9-201ENST00000465301 ITPRIPQ8IWB1 547 aa10.23□□□□□ -0.77
RTL9-201ENST00000465301 DCAF8L1A6NGE4 600 aa10.23□□□□□ -0.77
RTL9-201ENST00000465301 STK26Q9P289 416 aa10.22□□□□□ -0.77
RTL9-201ENST00000465301 TNNT3P45378 269 aaPredicted RBP10.22□□□□□ -0.77
RTL9-201ENST00000465301 U2AF1L5P0DN76 240 aaPredicted RBP10.22□□□□□ -0.77
RTL9-201ENST00000465301 U2AF1Q01081 240 aaKnown RBP eCLIP10.22□□□□□ -0.77
RTL9-201ENST00000465301 CCDC70Q6NSX1 233 aa10.22□□□□□ -0.77
RTL9-201ENST00000465301 AKAP17AQ02040 695 aaKnown RBP10.21□□□□□ -0.77
RTL9-201ENST00000465301 RALBP1Q15311 655 aa10.21□□□□□ -0.77
RTL9-201ENST00000465301 TPM1P09493 284 aa10.21□□□□□ -0.77
RTL9-201ENST00000465301 SETQ01105 290 aaPredicted RBP10.21□□□□□ -0.77
RTL9-201ENST00000465301 SAFB2Q14151 953 aaKnown RBP eCLIP10.21□□□□□ -0.77
RTL9-201ENST00000465301 APBB1O00213 710 aa10.21□□□□□ -0.78
RTL9-201ENST00000465301 CCDC47Q96A33 483 aaKnown RBP10.21□□□□□ -0.78
RTL9-201ENST00000465301 TOMM22Q9NS69 142 aa10.21□□□□□ -0.78
RTL9-201ENST00000465301 EIF4G1Q04637 1599 aaKnown RBP10.21□□□□□ -0.78
RTL9-201ENST00000465301 KIF16BQ96L93 1317 aa10.21□□□□□ -0.78
RTL9-201ENST00000465301 TPD52L1Q16890 204 aaPredicted RBP10.2□□□□□ -0.78
RTL9-201ENST00000465301 EFCAB2Q5VUJ9 269 aa10.2□□□□□ -0.78
RTL9-201ENST00000465301 TNIKQ9UKE5 1360 aa10.2□□□□□ -0.78
RTL9-201ENST00000465301 TRIM6-TRIM34B2RNG4 842 aa10.2□□□□□ -0.78
RTL9-201ENST00000465301 CNKSR2Q8WXI2 1034 aa10.2□□□□□ -0.78
RTL9-201ENST00000465301 NGDNQ8NEJ9 315 aaKnown RBP10.2□□□□□ -0.78
RTL9-201ENST00000465301 SF3A1Q15459 793 aaKnown RBP10.19□□□□□ -0.78
RTL9-201ENST00000465301 SYNE3Q6ZMZ3 975 aa10.19□□□□□ -0.78
RTL9-201ENST00000465301 CCER2I3L3R5 266 aa10.19□□□□□ -0.78
RTL9-201ENST00000465301 PDE4CQ08493 712 aa10.19□□□□□ -0.78
RTL9-201ENST00000465301 CWC22Q9HCG8 908 aaKnown RBP10.19□□□□□ -0.78
RTL9-201ENST00000465301 AMPHP49418 695 aa10.18□□□□□ -0.78
RTL9-201ENST00000465301 ST18O60284 1047 aa10.17□□□□□ -0.78
RTL9-201ENST00000465301 CPLX2Q6PUV4 134 aaKnown RBP10.17□□□□□ -0.78
RTL9-201ENST00000465301 WASHC2AQ641Q2 1341 aa10.17□□□□□ -0.78
RTL9-201ENST00000465301 CREBRFQ8IUR6 639 aa10.16□□□□□ -0.78
RTL9-201ENST00000465301 ATP6V1DQ9Y5K8 247 aa10.16□□□□□ -0.78
RTL9-201ENST00000465301 ROCK2O75116 1388 aaKnown RBP10.16□□□□□ -0.78
RTL9-201ENST00000465301 GPS2Q13227 327 aa10.16□□□□□ -0.78
RTL9-201ENST00000465301 SMC4Q9NTJ3 1288 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms